RNA–Protein interactions for RNA: ENST00000565982.1

TM6SF1-208, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 3

Gene TM6SF1, Length 856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-208ENST00000565982 DUSP27Q5VZP5 1158 aa35.25■■■■□ 3.23
TM6SF1-208ENST00000565982 TSPYL4Q9UJ04 414 aa35.25■■■■□ 3.23
TM6SF1-208ENST00000565982 BTBD11A6QL63 1104 aa35.23■■■■□ 3.23
TM6SF1-208ENST00000565982 KRT27Q7Z3Y8 459 aa35.23■■■■□ 3.23
TM6SF1-208ENST00000565982 NFATC2IPQ8NCF5 419 aa35.23■■■■□ 3.23
TM6SF1-208ENST00000565982 FANCIQ9NVI1 1328 aa35.23■■■■□ 3.23
TM6SF1-208ENST00000565982 MBIPQ9NS73 344 aa35.22■■■■□ 3.23
TM6SF1-208ENST00000565982 TMOD3Q9NYL9 352 aa35.22■■■■□ 3.23
TM6SF1-208ENST00000565982 TSR2Q969E8 191 aaKnown RBP35.18■■■■□ 3.22
TM6SF1-208ENST00000565982 CT47B1P0C2W7 299 aaPredicted RBP35.16■■■■□ 3.22
TM6SF1-208ENST00000565982 FAM196AQ6ZSG2 479 aa35.16■■■■□ 3.22
TM6SF1-208ENST00000565982 VIRMAQ69YN4 1812 aaKnown RBP35.16■■■■□ 3.22
TM6SF1-208ENST00000565982 RGS12O14924 1447 aa35.15■■■■□ 3.22
TM6SF1-208ENST00000565982 PRIM1P49642 420 aaKnown RBP35.14■■■■□ 3.22
TM6SF1-208ENST00000565982 MIS18AQ9NYP9 233 aa35.14■■■■□ 3.22
TM6SF1-208ENST00000565982 SIPA1L3O60292 1781 aaPredicted RBP35.14■■■■□ 3.22
TM6SF1-208ENST00000565982 TTC5Q8N0Z6 440 aa35.13■■■■□ 3.21
TM6SF1-208ENST00000565982 SYTL4Q96C24 671 aaPredicted RBP35.13■■■■□ 3.21
TM6SF1-208ENST00000565982 TOGARAM1Q9Y4F4 1720 aa35.12■■■■□ 3.21
TM6SF1-208ENST00000565982 SOS1Q07889 1333 aaPredicted RBP35.12■■■■□ 3.21
TM6SF1-208ENST00000565982 ZNF790Q6PG37 636 aa35.12■■■■□ 3.21
TM6SF1-208ENST00000565982 PIGBQ92521 554 aa35.11■■■■□ 3.21
TM6SF1-208ENST00000565982 EXOSC9Q06265 439 aaKnown RBP35.09■■■■□ 3.21
TM6SF1-208ENST00000565982 ACSBG1Q96GR2 724 aa35.09■■■■□ 3.21
TM6SF1-208ENST00000565982 CHMP4AQ9BY43 222 aa35.09■■■■□ 3.21
TM6SF1-208ENST00000565982 DOT1LQ8TEK3 1739 aa35.09■■■■□ 3.21
TM6SF1-208ENST00000565982 ZNF428Q96B54 188 aa35.07■■■■□ 3.2
TM6SF1-208ENST00000565982 EIF4A1P60842 406 aaKnown RBP35.06■■■■□ 3.2
TM6SF1-208ENST00000565982 KDM3BQ7LBC6 1761 aa35.05■■■■□ 3.2
TM6SF1-208ENST00000565982 BRWD3Q6RI45 1802 aa35.05■■■■□ 3.2
TM6SF1-208ENST00000565982 HOXB7P09629 217 aa35.04■■■■□ 3.2
TM6SF1-208ENST00000565982 SLC39A6Q13433 755 aa35.04■■■■□ 3.2
TM6SF1-208ENST00000565982 SMARCC1Q92922 1105 aaPredicted RBP35.04■■■■□ 3.2
TM6SF1-208ENST00000565982 FMNL2Q96PY5 1086 aa35.04■■■■□ 3.2
TM6SF1-208ENST00000565982 FAM182BQ5T319 152 aa35.03■■■■□ 3.2
TM6SF1-208ENST00000565982 ITGB4P16144 1822 aa35.02■■■■□ 3.2
TM6SF1-208ENST00000565982 TWISTNBQ3B726 338 aaPredicted RBP35.02■■■■□ 3.2
TM6SF1-208ENST00000565982 C8orf58Q8NAV2 365 aa35.01■■■■□ 3.2
TM6SF1-208ENST00000565982 BCL11BQ9C0K0 894 aaPredicted RBP35.01■■■■□ 3.2
TM6SF1-208ENST00000565982 ATG3Q9NT62 314 aa35.01■■■■□ 3.2
TM6SF1-208ENST00000565982 KCNQ3O43525 872 aa35■■■■□ 3.19
TM6SF1-208ENST00000565982 NHSQ6T4R5 1651 aa34.99■■■■□ 3.19
TM6SF1-208ENST00000565982 KCNQ2O43526 872 aa34.99■■■■□ 3.19
TM6SF1-208ENST00000565982 ASAP1Q9ULH1 1129 aa34.99■■■■□ 3.19
TM6SF1-208ENST00000565982 PAPPAQ13219 1627 aa34.99■■■■□ 3.19
TM6SF1-208ENST00000565982 HEG1Q9ULI3 1381 aa34.99■■■■□ 3.19
TM6SF1-208ENST00000565982 ZNF496Q96IT1 587 aaPredicted RBP34.97■■■■□ 3.19
TM6SF1-208ENST00000565982 RCAN3Q9UKA8 241 aa34.97■■■■□ 3.19
TM6SF1-208ENST00000565982 VAMP4O75379 141 aa34.96■■■■□ 3.19
TM6SF1-208ENST00000565982 SNRPA1P09661 255 aaKnown RBP34.96■■■■□ 3.19
TM6SF1-208ENST00000565982 VSIG10Q8N0Z9 540 aa34.96■■■■□ 3.19
TM6SF1-208ENST00000565982 GIGYF1O75420 1035 aaPredicted RBP34.95■■■■□ 3.19
TM6SF1-208ENST00000565982 TSPYL6Q8N831 410 aa34.95■■■■□ 3.19
TM6SF1-208ENST00000565982 ELL2O00472 640 aaPredicted RBP34.94■■■■□ 3.18
TM6SF1-208ENST00000565982 TEX13AQ9BXU3 409 aaPredicted RBP34.94■■■■□ 3.18
TM6SF1-208ENST00000565982 PTCD1O75127 700 aaKnown RBP34.92■■■■□ 3.18
TM6SF1-208ENST00000565982 KRT24Q2M2I5 525 aa34.92■■■■□ 3.18
TM6SF1-208ENST00000565982 ALDH1L2Q3SY69 923 aa34.92■■■■□ 3.18
TM6SF1-208ENST00000565982 KCPQ6ZWJ8 1503 aa34.91■■■■□ 3.18
TM6SF1-208ENST00000565982 UBR2Q8IWV8 1755 aa34.9■■■■□ 3.18
TM6SF1-208ENST00000565982 PALLDQ8WX93 1383 aa34.9■■■■□ 3.18
TM6SF1-208ENST00000565982 KAT6BQ8WYB5 2073 aa34.9■■■■□ 3.18
TM6SF1-208ENST00000565982 CCDC30Q5VVM6 783 aa34.9■■■■□ 3.18
TM6SF1-208ENST00000565982 RBM42Q9BTD8 480 aaKnown RBP34.89■■■■□ 3.18
TM6SF1-208ENST00000565982 SBF2Q86WG5 1849 aa34.89■■■■□ 3.18
TM6SF1-208ENST00000565982 TRIM37O94972 964 aa34.88■■■■□ 3.17
TM6SF1-208ENST00000565982 RARSP54136 660 aaKnown RBP34.88■■■■□ 3.17
TM6SF1-208ENST00000565982 HDGFL1Q5TGJ6 251 aa34.87■■■■□ 3.17
TM6SF1-208ENST00000565982 HMGB2P26583 209 aaKnown RBP34.86■■■■□ 3.17
TM6SF1-208ENST00000565982 STK31Q9BXU1 1019 aa34.85■■■■□ 3.17
TM6SF1-208ENST00000565982 LOC102724428A0A0B4J2F2 783 aa34.84■■■■□ 3.17
TM6SF1-208ENST00000565982 SIK1P57059 783 aa34.84■■■■□ 3.17
TM6SF1-208ENST00000565982 BTAF1O14981 1849 aa34.83■■■■□ 3.17
TM6SF1-208ENST00000565982 STARD3NLO95772 234 aa34.82■■■■□ 3.16
TM6SF1-208ENST00000565982 PTF1AQ7RTS3 328 aa34.82■■■■□ 3.16
TM6SF1-208ENST00000565982 SMC4Q9NTJ3 1288 aa34.82■■■■□ 3.16
TM6SF1-208ENST00000565982 EIF2S2P20042 333 aaKnown RBP34.81■■■■□ 3.16
TM6SF1-208ENST00000565982 BRPF1P55201 1214 aaPredicted RBP34.81■■■■□ 3.16
TM6SF1-208ENST00000565982 SSH1Q8WYL5 1049 aa34.81■■■■□ 3.16
TM6SF1-208ENST00000565982 ERBB4Q15303 1308 aa34.81■■■■□ 3.16
TM6SF1-208ENST00000565982 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.8■■■■□ 3.16
TM6SF1-208ENST00000565982 DBF4Q9UBU7 674 aaPredicted RBP34.79■■■■□ 3.16
TM6SF1-208ENST00000565982 ATP6V1AP38606 617 aa34.78■■■■□ 3.16
TM6SF1-208ENST00000565982 KIF16BQ96L93 1317 aa34.78■■■■□ 3.16
TM6SF1-208ENST00000565982 USP16Q9Y5T5 823 aa34.77■■■■□ 3.16
TM6SF1-208ENST00000565982 ZNF831Q5JPB2 1677 aa34.76■■■■□ 3.16
TM6SF1-208ENST00000565982 PLSCR1O15162 318 aa34.76■■■■□ 3.16
TM6SF1-208ENST00000565982 PRAMEF22A3QJZ6 481 aa34.75■■■■□ 3.15
TM6SF1-208ENST00000565982 DNAJC10Q8IXB1 793 aa34.75■■■■□ 3.15
TM6SF1-208ENST00000565982 SLC4A9Q96Q91 983 aa34.75■■■■□ 3.15
TM6SF1-208ENST00000565982 APBA3O96018 575 aa34.74■■■■□ 3.15
TM6SF1-208ENST00000565982 SLC27A3Q5K4L6 730 aa34.74■■■■□ 3.15
TM6SF1-208ENST00000565982 MRPL50Q8N5N7 158 aaKnown RBP34.74■■■■□ 3.15
TM6SF1-208ENST00000565982 CICQ96RK0 1608 aaPredicted RBP34.73■■■■□ 3.15
TM6SF1-208ENST00000565982 LAMB4A4D0S4 1761 aa34.73■■■■□ 3.15
TM6SF1-208ENST00000565982 IPO8O15397 1037 aaKnown RBP34.73■■■■□ 3.15
TM6SF1-208ENST00000565982 BCAR3O75815 825 aa34.73■■■■□ 3.15
TM6SF1-208ENST00000565982 SLC4A2P04920 1241 aa34.73■■■■□ 3.15
TM6SF1-208ENST00000565982 DDX21Q9NR30 783 aaKnown RBP eCLIP34.73■■■■□ 3.15
TM6SF1-208ENST00000565982 SF3B2Q13435 895 aaKnown RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms