RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 PROM2Q8N271 834 aa13.39□□□□□ -0.27
CNOT1-208ENST00000565697 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
CNOT1-208ENST00000565697 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
CNOT1-208ENST00000565697 IL13P35225 146 aa13.38□□□□□ -0.27
CNOT1-208ENST00000565697 NKX1-1Q15270 411 aaPredicted RBP13.38□□□□□ -0.27
CNOT1-208ENST00000565697 PLEKHO1Q53GL0 409 aaPredicted RBP13.38□□□□□ -0.27
CNOT1-208ENST00000565697 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
CNOT1-208ENST00000565697 DIAPH1O60610 1272 aaKnown RBP13.37□□□□□ -0.27
CNOT1-208ENST00000565697 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
CNOT1-208ENST00000565697 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-208ENST00000565697 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
CNOT1-208ENST00000565697 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
CNOT1-208ENST00000565697 LRP5O75197 1615 aa13.35□□□□□ -0.27
CNOT1-208ENST00000565697 PHKG2P15735 406 aa13.35□□□□□ -0.27
CNOT1-208ENST00000565697 SLC15A2Q16348 729 aa13.35□□□□□ -0.27
CNOT1-208ENST00000565697 SMARCC1Q92922 1105 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-208ENST00000565697 CFAP53Q96M91 514 aa13.35□□□□□ -0.27
CNOT1-208ENST00000565697 KDRP35968 1356 aa13.34□□□□□ -0.27
CNOT1-208ENST00000565697 MPRIPQ6WCQ1 1025 aa13.34□□□□□ -0.27
CNOT1-208ENST00000565697 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-208ENST00000565697 C1orf141Q5JVX7 400 aa13.33□□□□□ -0.28
CNOT1-208ENST00000565697 DCAF5Q96JK2 942 aa13.33□□□□□ -0.28
CNOT1-208ENST00000565697 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-208ENST00000565697 ZNF530Q6P9A1 599 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-208ENST00000565697 AEBP1Q8IUX7 1158 aa13.32□□□□□ -0.28
CNOT1-208ENST00000565697 SPON1Q9HCB6 807 aa13.32□□□□□ -0.28
CNOT1-208ENST00000565697 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
CNOT1-208ENST00000565697 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
CNOT1-208ENST00000565697 LY75O60449 1722 aa13.32□□□□□ -0.28
CNOT1-208ENST00000565697 ERVV-2B6SEH9 535 aa13.31□□□□□ -0.28
CNOT1-208ENST00000565697 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
CNOT1-208ENST00000565697 ITGB4P16144 1822 aa13.31□□□□□ -0.28
CNOT1-208ENST00000565697 PALLDQ8WX93 1383 aa13.31□□□□□ -0.28
CNOT1-208ENST00000565697 PIGBQ92521 554 aa13.3□□□□□ -0.28
CNOT1-208ENST00000565697 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
CNOT1-208ENST00000565697 PAPPAQ13219 1627 aa13.3□□□□□ -0.28
CNOT1-208ENST00000565697 U2SURPO15042 1029 aaKnown RBP13.29□□□□□ -0.28
CNOT1-208ENST00000565697 HMOX1P09601 288 aa13.29□□□□□ -0.28
CNOT1-208ENST00000565697 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
CNOT1-208ENST00000565697 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
CNOT1-208ENST00000565697 TOGARAM1Q9Y4F4 1720 aa13.29□□□□□ -0.28
CNOT1-208ENST00000565697 AKAP4Q5JQC9 854 aa13.28□□□□□ -0.28
CNOT1-208ENST00000565697 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
CNOT1-208ENST00000565697 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-208ENST00000565697 CABP4P57796 275 aa13.27□□□□□ -0.29
CNOT1-208ENST00000565697 ZNF827Q17R98 1081 aa13.27□□□□□ -0.29
CNOT1-208ENST00000565697 PPP1R1BQ9UD71 204 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-208ENST00000565697 CASZ1Q86V15 1759 aa13.27□□□□□ -0.29
CNOT1-208ENST00000565697 KCNQ4P56696 695 aa13.26□□□□□ -0.29
CNOT1-208ENST00000565697 SLC16A10Q8TF71 515 aa13.26□□□□□ -0.29
CNOT1-208ENST00000565697 MTFR1LQ9H019 292 aa13.26□□□□□ -0.29
CNOT1-208ENST00000565697 QSER1Q2KHR3 1735 aa13.25□□□□□ -0.29
CNOT1-208ENST00000565697 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
CNOT1-208ENST00000565697 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
CNOT1-208ENST00000565697 SIK1P57059 783 aa13.25□□□□□ -0.29
CNOT1-208ENST00000565697 RALBP1Q15311 655 aa13.25□□□□□ -0.29
CNOT1-208ENST00000565697 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
CNOT1-208ENST00000565697 GAS2L2Q8NHY3 880 aa13.25□□□□□ -0.29
CNOT1-208ENST00000565697 KDM6AO15550 1401 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-208ENST00000565697 ATP6V1AP38606 617 aa13.24□□□□□ -0.29
CNOT1-208ENST00000565697 DDX10Q13206 875 aaKnown RBP13.24□□□□□ -0.29
CNOT1-208ENST00000565697 MTHFSDQ2M296 383 aaKnown RBP13.24□□□□□ -0.29
CNOT1-208ENST00000565697 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-208ENST00000565697 ATG3Q9NT62 314 aa13.24□□□□□ -0.29
CNOT1-208ENST00000565697 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
CNOT1-208ENST00000565697 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
CNOT1-208ENST00000565697 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-208ENST00000565697 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
CNOT1-208ENST00000565697 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
CNOT1-208ENST00000565697 AK7Q96M32 723 aa13.23□□□□□ -0.29
CNOT1-208ENST00000565697 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
CNOT1-208ENST00000565697 C5P01031 1676 aa13.23□□□□□ -0.29
CNOT1-208ENST00000565697 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
CNOT1-208ENST00000565697 FCHSD2O94868 740 aa13.22□□□□□ -0.29
CNOT1-208ENST00000565697 NFATC2IPQ8NCF5 419 aa13.22□□□□□ -0.29
CNOT1-208ENST00000565697 TAF1LQ8IZX4 1826 aa13.22□□□□□ -0.29
CNOT1-208ENST00000565697 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
CNOT1-208ENST00000565697 NEFMP07197 916 aa13.21□□□□□ -0.29
CNOT1-208ENST00000565697 C7P10643 843 aa13.21□□□□□ -0.29
CNOT1-208ENST00000565697 POLD1P28340 1107 aa13.21□□□□□ -0.29
CNOT1-208ENST00000565697 PRKAR2BP31323 418 aa13.21□□□□□ -0.29
CNOT1-208ENST00000565697 SLC39A7Q92504 469 aa13.21□□□□□ -0.29
CNOT1-208ENST00000565697 SLC52A2Q9HAB3 445 aa13.21□□□□□ -0.29
CNOT1-208ENST00000565697 C4BP0C0L5 1744 aa13.2□□□□□ -0.3
CNOT1-208ENST00000565697 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
CNOT1-208ENST00000565697 PTGER2P43116 358 aa13.2□□□□□ -0.3
CNOT1-208ENST00000565697 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
CNOT1-208ENST00000565697 PNNQ9H307 717 aaKnown RBP13.2□□□□□ -0.3
CNOT1-208ENST00000565697 LGR6Q9HBX8 967 aa13.2□□□□□ -0.3
CNOT1-208ENST00000565697 MAP3K5Q99683 1374 aa13.2□□□□□ -0.3
CNOT1-208ENST00000565697 COL23A1Q86Y22 540 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-208ENST00000565697 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
CNOT1-208ENST00000565697 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
CNOT1-208ENST00000565697 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
CNOT1-208ENST00000565697 SSFA2P28290 1259 aa13.18□□□□□ -0.3
CNOT1-208ENST00000565697 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-208ENST00000565697 ARXQ96QS3 562 aa13.18□□□□□ -0.3
CNOT1-208ENST00000565697 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
CNOT1-208ENST00000565697 MRC1P22897 1456 aa13.17□□□□□ -0.3
CNOT1-208ENST00000565697 TEFQ10587 303 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms