RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 MAP3K5Q99683 1374 aa24.78■■□□□ 1.56
CSPG4P13-201ENST00000565545 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
CSPG4P13-201ENST00000565545 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
CSPG4P13-201ENST00000565545 SBF2Q86WG5 1849 aa24.77■■□□□ 1.56
CSPG4P13-201ENST00000565545 ACSBG1Q96GR2 724 aa24.77■■□□□ 1.56
CSPG4P13-201ENST00000565545 RCAN3Q9UKA8 241 aa24.77■■□□□ 1.56
CSPG4P13-201ENST00000565545 SUPT16HQ9Y5B9 1047 aaKnown RBP24.77■■□□□ 1.56
CSPG4P13-201ENST00000565545 PTGER2P43116 358 aa24.75■■□□□ 1.55
CSPG4P13-201ENST00000565545 CFAP44Q96MT7 982 aa24.75■■□□□ 1.55
CSPG4P13-201ENST00000565545 CT47B1P0C2W7 299 aaPredicted RBP24.74■■□□□ 1.55
CSPG4P13-201ENST00000565545 ZNF853P0CG23 659 aa24.74■■□□□ 1.55
CSPG4P13-201ENST00000565545 AKAP4Q5JQC9 854 aa24.74■■□□□ 1.55
CSPG4P13-201ENST00000565545 FANCIQ9NVI1 1328 aa24.73■■□□□ 1.55
CSPG4P13-201ENST00000565545 IL2RBP14784 551 aa24.73■■□□□ 1.55
CSPG4P13-201ENST00000565545 SPG7Q9UQ90 795 aa24.73■■□□□ 1.55
CSPG4P13-201ENST00000565545 PKD1L3Q7Z443 1732 aa24.72■■□□□ 1.55
CSPG4P13-201ENST00000565545 TNS2Q63HR2 1409 aa24.72■■□□□ 1.55
CSPG4P13-201ENST00000565545 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
CSPG4P13-201ENST00000565545 NEFLP07196 543 aa24.72■■□□□ 1.55
CSPG4P13-201ENST00000565545 ZNF530Q6P9A1 599 aaPredicted RBP24.72■■□□□ 1.55
CSPG4P13-201ENST00000565545 THUMPD2Q9BTF0 503 aaKnown RBP24.72■■□□□ 1.55
CSPG4P13-201ENST00000565545 MTFR1LQ9H019 292 aa24.72■■□□□ 1.55
CSPG4P13-201ENST00000565545 C1orf141Q5JVX7 400 aa24.71■■□□□ 1.55
CSPG4P13-201ENST00000565545 MCM10Q7L590 875 aa24.71■■□□□ 1.55
CSPG4P13-201ENST00000565545 FHDC1Q9C0D6 1143 aaPredicted RBP24.71■■□□□ 1.55
CSPG4P13-201ENST00000565545 MEGF6O75095 1541 aa24.71■■□□□ 1.55
CSPG4P13-201ENST00000565545 DCTN1Q14203 1278 aa24.7■■□□□ 1.54
CSPG4P13-201ENST00000565545 SYT17Q9BSW7 474 aa24.7■■□□□ 1.54
CSPG4P13-201ENST00000565545 WNK3Q9BYP7 1800 aa24.7■■□□□ 1.54
CSPG4P13-201ENST00000565545 CASZ1Q86V15 1759 aa24.7■■□□□ 1.54
CSPG4P13-201ENST00000565545 BABAM1Q9NWV8 329 aa24.69■■□□□ 1.54
CSPG4P13-201ENST00000565545 GTF3C3Q9Y5Q9 886 aa24.69■■□□□ 1.54
CSPG4P13-201ENST00000565545 CHL1O00533 1208 aa24.67■■□□□ 1.54
CSPG4P13-201ENST00000565545 TSR2Q969E8 191 aaKnown RBP24.67■■□□□ 1.54
CSPG4P13-201ENST00000565545 LAS1LQ9Y4W2 734 aaKnown RBP24.67■■□□□ 1.54
CSPG4P13-201ENST00000565545 CEMIPQ8WUJ3 1361 aa24.67■■□□□ 1.54
CSPG4P13-201ENST00000565545 VIRMAQ69YN4 1812 aaKnown RBP24.66■■□□□ 1.54
CSPG4P13-201ENST00000565545 IL17REQ8NFR9 667 aa24.66■■□□□ 1.54
CSPG4P13-201ENST00000565545 ARXQ96QS3 562 aa24.65■■□□□ 1.54
CSPG4P13-201ENST00000565545 MBIPQ9NS73 344 aa24.65■■□□□ 1.54
CSPG4P13-201ENST00000565545 ADAMTS7Q9UKP4 1686 aa24.65■■□□□ 1.54
CSPG4P13-201ENST00000565545 HSP90AB1P08238 724 aaKnown RBP24.64■■□□□ 1.54
CSPG4P13-201ENST00000565545 EXOSC9Q06265 439 aaKnown RBP24.64■■□□□ 1.54
CSPG4P13-201ENST00000565545 IFNL2Q8IZJ0 200 aa24.64■■□□□ 1.54
CSPG4P13-201ENST00000565545 DDX54Q8TDD1 881 aaKnown RBP24.64■■□□□ 1.54
CSPG4P13-201ENST00000565545 ZNF428Q96B54 188 aa24.64■■□□□ 1.54
CSPG4P13-201ENST00000565545 TAF7Q15545 349 aaPredicted RBP24.63■■□□□ 1.53
CSPG4P13-201ENST00000565545 PHKG2P15735 406 aa24.62■■□□□ 1.53
CSPG4P13-201ENST00000565545 ZCRB1Q8TBF4 217 aaKnown RBP24.62■■□□□ 1.53
CSPG4P13-201ENST00000565545 SGIP1Q9BQI5 828 aa24.62■■□□□ 1.53
CSPG4P13-201ENST00000565545 RNMTO43148 476 aaKnown RBP24.61■■□□□ 1.53
CSPG4P13-201ENST00000565545 RRP1P56182 461 aaKnown RBP24.61■■□□□ 1.53
CSPG4P13-201ENST00000565545 SCN11AQ9UI33 1791 aa24.61■■□□□ 1.53
CSPG4P13-201ENST00000565545 PCDH11XQ9BZA7 1347 aa24.61■■□□□ 1.53
CSPG4P13-201ENST00000565545 PCDH11YQ9BZA8 1340 aa24.61■■□□□ 1.53
CSPG4P13-201ENST00000565545 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.6■■□□□ 1.53
CSPG4P13-201ENST00000565545 ZNF784Q8NCA9 323 aaPredicted RBP24.6■■□□□ 1.53
CSPG4P13-201ENST00000565545 ZNF827Q17R98 1081 aa24.59■■□□□ 1.53
CSPG4P13-201ENST00000565545 ERICH6BQ5W0A0 696 aa24.59■■□□□ 1.53
CSPG4P13-201ENST00000565545 MPRIPQ6WCQ1 1025 aa24.59■■□□□ 1.53
CSPG4P13-201ENST00000565545 LRRC4BQ9NT99 713 aa24.59■■□□□ 1.53
CSPG4P13-201ENST00000565545 NHSQ6T4R5 1651 aa24.59■■□□□ 1.53
CSPG4P13-201ENST00000565545 TEFQ10587 303 aa24.58■■□□□ 1.53
CSPG4P13-201ENST00000565545 SYTL4Q96C24 671 aaPredicted RBP24.58■■□□□ 1.53
CSPG4P13-201ENST00000565545 LGR6Q9HBX8 967 aa24.58■■□□□ 1.53
CSPG4P13-201ENST00000565545 TSPYL4Q9UJ04 414 aa24.58■■□□□ 1.53
CSPG4P13-201ENST00000565545 RARSP54136 660 aaKnown RBP24.57■■□□□ 1.52
CSPG4P13-201ENST00000565545 KLHL34Q8N239 644 aa24.57■■□□□ 1.52
CSPG4P13-201ENST00000565545 DCAF5Q96JK2 942 aa24.57■■□□□ 1.52
CSPG4P13-201ENST00000565545 CYP27B1O15528 508 aa24.56■■□□□ 1.52
CSPG4P13-201ENST00000565545 FKBP8Q14318 412 aa24.56■■□□□ 1.52
CSPG4P13-201ENST00000565545 SLC27A3Q5K4L6 730 aa24.56■■□□□ 1.52
CSPG4P13-201ENST00000565545 SIPA1L3O60292 1781 aaPredicted RBP24.56■■□□□ 1.52
CSPG4P13-201ENST00000565545 SHANK3Q9BYB0 1731 aa24.55■■□□□ 1.52
CSPG4P13-201ENST00000565545 ALDH1L2Q3SY69 923 aa24.55■■□□□ 1.52
CSPG4P13-201ENST00000565545 SOS1Q07889 1333 aaPredicted RBP24.55■■□□□ 1.52
CSPG4P13-201ENST00000565545 KAT6BQ8WYB5 2073 aa24.54■■□□□ 1.52
CSPG4P13-201ENST00000565545 POLD1P28340 1107 aa24.54■■□□□ 1.52
CSPG4P13-201ENST00000565545 NKX1-1Q15270 411 aaPredicted RBP24.54■■□□□ 1.52
CSPG4P13-201ENST00000565545 GPR162Q16538 588 aa24.54■■□□□ 1.52
CSPG4P13-201ENST00000565545 KDM3BQ7LBC6 1761 aa24.53■■□□□ 1.52
CSPG4P13-201ENST00000565545 VAMP4O75379 141 aa24.53■■□□□ 1.52
CSPG4P13-201ENST00000565545 PRIM1P49642 420 aaKnown RBP24.53■■□□□ 1.52
CSPG4P13-201ENST00000565545 SLC16A10Q8TF71 515 aa24.53■■□□□ 1.52
CSPG4P13-201ENST00000565545 AKT1S1Q96B36 256 aa24.53■■□□□ 1.52
CSPG4P13-201ENST00000565545 TFCP2L1Q9NZI6 479 aa24.53■■□□□ 1.52
CSPG4P13-201ENST00000565545 KDM6AO15550 1401 aaPredicted RBP24.52■■□□□ 1.52
CSPG4P13-201ENST00000565545 TWISTNBQ3B726 338 aaPredicted RBP24.52■■□□□ 1.52
CSPG4P13-201ENST00000565545 MRC1P22897 1456 aa24.51■■□□□ 1.51
CSPG4P13-201ENST00000565545 KCNQ4P56696 695 aa24.51■■□□□ 1.51
CSPG4P13-201ENST00000565545 C8orf58Q8NAV2 365 aa24.51■■□□□ 1.51
CSPG4P13-201ENST00000565545 BCAR3O75815 825 aa24.5■■□□□ 1.51
CSPG4P13-201ENST00000565545 MIS18AQ9NYP9 233 aa24.5■■□□□ 1.51
CSPG4P13-201ENST00000565545 BTAF1O14981 1849 aa24.49■■□□□ 1.51
CSPG4P13-201ENST00000565545 BTBD11A6QL63 1104 aa24.49■■□□□ 1.51
CSPG4P13-201ENST00000565545 BRPF1P55201 1214 aaPredicted RBP24.49■■□□□ 1.51
CSPG4P13-201ENST00000565545 PELP1Q8IZL8 1130 aaKnown RBP24.49■■□□□ 1.51
CSPG4P13-201ENST00000565545 TSPYL6Q8N831 410 aa24.49■■□□□ 1.51
CSPG4P13-201ENST00000565545 SLC52A2Q9HAB3 445 aa24.49■■□□□ 1.51
CSPG4P13-201ENST00000565545 ERVV-2B6SEH9 535 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms