RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 NFATC2IPQ8NCF5 419 aa20.59■□□□□ 0.89
COMMD4-212ENST00000565517 SRCAPQ6ZRS2 3230 aa20.59■□□□□ 0.89
COMMD4-212ENST00000565517 TUBGCP6Q96RT7 1819 aa20.58■□□□□ 0.89
COMMD4-212ENST00000565517 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.89
COMMD4-212ENST00000565517 LGR6Q9HBX8 967 aa20.58■□□□□ 0.89
COMMD4-212ENST00000565517 MRC1P22897 1456 aa20.57■□□□□ 0.88
COMMD4-212ENST00000565517 GNAT3A8MTJ3 354 aa20.57■□□□□ 0.88
COMMD4-212ENST00000565517 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
COMMD4-212ENST00000565517 SLC52A2Q9HAB3 445 aa20.57■□□□□ 0.88
COMMD4-212ENST00000565517 SPON1Q9HCB6 807 aa20.57■□□□□ 0.88
COMMD4-212ENST00000565517 MAP3K5Q99683 1374 aa20.57■□□□□ 0.88
COMMD4-212ENST00000565517 PDGFDQ9GZP0 370 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-212ENST00000565517 TFCP2L1Q9NZI6 479 aa20.56■□□□□ 0.88
COMMD4-212ENST00000565517 PNNQ9H307 717 aaKnown RBP20.55■□□□□ 0.88
COMMD4-212ENST00000565517 C4BP0C0L5 1744 aa20.55■□□□□ 0.88
COMMD4-212ENST00000565517 ATP6V1AP38606 617 aa20.54■□□□□ 0.88
COMMD4-212ENST00000565517 SLC16A10Q8TF71 515 aa20.53■□□□□ 0.88
COMMD4-212ENST00000565517 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
COMMD4-212ENST00000565517 SIPA1L3O60292 1781 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-212ENST00000565517 NEFMP07197 916 aa20.52■□□□□ 0.88
COMMD4-212ENST00000565517 IL17REQ8NFR9 667 aa20.52■□□□□ 0.88
COMMD4-212ENST00000565517 MTFR1LQ9H019 292 aa20.52■□□□□ 0.88
COMMD4-212ENST00000565517 UBR3Q6ZT12 1888 aa20.52■□□□□ 0.87
COMMD4-212ENST00000565517 ITPK1Q13572 414 aa20.51■□□□□ 0.87
COMMD4-212ENST00000565517 FLAD1Q8NFF5 587 aa20.51■□□□□ 0.87
COMMD4-212ENST00000565517 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
COMMD4-212ENST00000565517 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
COMMD4-212ENST00000565517 CEMIPQ8WUJ3 1361 aa20.5■□□□□ 0.87
COMMD4-212ENST00000565517 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-212ENST00000565517 HTATSF1O43719 755 aaKnown RBP20.5■□□□□ 0.87
COMMD4-212ENST00000565517 ZBTB7AO95365 584 aa20.5■□□□□ 0.87
COMMD4-212ENST00000565517 LINC00116Q8NCU8 138 aa20.5■□□□□ 0.87
COMMD4-212ENST00000565517 SLC4A9Q96Q91 983 aa20.5■□□□□ 0.87
COMMD4-212ENST00000565517 DLG5Q8TDM6 1919 aa20.5■□□□□ 0.87
COMMD4-212ENST00000565517 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-212ENST00000565517 TEFQ10587 303 aa20.49■□□□□ 0.87
COMMD4-212ENST00000565517 AK7Q96M32 723 aa20.49■□□□□ 0.87
COMMD4-212ENST00000565517 COL24A1Q17RW2 1714 aa20.49■□□□□ 0.87
COMMD4-212ENST00000565517 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
COMMD4-212ENST00000565517 RTF1Q92541 710 aaKnown RBP20.48■□□□□ 0.87
COMMD4-212ENST00000565517 UBR2Q8IWV8 1755 aa20.47■□□□□ 0.87
COMMD4-212ENST00000565517 PTGER2P43116 358 aa20.47■□□□□ 0.87
COMMD4-212ENST00000565517 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
COMMD4-212ENST00000565517 COL23A1Q86Y22 540 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-212ENST00000565517 ATF5Q9Y2D1 282 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-212ENST00000565517 TJP1Q07157 1748 aa20.45■□□□□ 0.86
COMMD4-212ENST00000565517 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
COMMD4-212ENST00000565517 SSFA2P28290 1259 aa20.45■□□□□ 0.86
COMMD4-212ENST00000565517 SLC39A6Q13433 755 aa20.45■□□□□ 0.86
COMMD4-212ENST00000565517 SGIP1Q9BQI5 828 aa20.45■□□□□ 0.86
COMMD4-212ENST00000565517 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
COMMD4-212ENST00000565517 KCPQ6ZWJ8 1503 aa20.44■□□□□ 0.86
COMMD4-212ENST00000565517 NFE2L2Q16236 605 aa20.44■□□□□ 0.86
COMMD4-212ENST00000565517 VSIG10Q8N0Z9 540 aa20.44■□□□□ 0.86
COMMD4-212ENST00000565517 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-212ENST00000565517 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
COMMD4-212ENST00000565517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.42■□□□□ 0.86
COMMD4-212ENST00000565517 GNPATO15228 680 aa20.42■□□□□ 0.86
COMMD4-212ENST00000565517 MSH5O43196 834 aa20.42■□□□□ 0.86
COMMD4-212ENST00000565517 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
COMMD4-212ENST00000565517 ZNF790Q6PG37 636 aa20.42■□□□□ 0.86
COMMD4-212ENST00000565517 MCM10Q7L590 875 aa20.42■□□□□ 0.86
COMMD4-212ENST00000565517 TTC5Q8N0Z6 440 aa20.42■□□□□ 0.86
COMMD4-212ENST00000565517 AMIGO3Q86WK7 504 aa20.41■□□□□ 0.86
COMMD4-212ENST00000565517 RTCBQ9Y3I0 505 aaKnown RBP20.41■□□□□ 0.86
COMMD4-212ENST00000565517 BTBD11A6QL63 1104 aa20.4■□□□□ 0.86
COMMD4-212ENST00000565517 RPS6KA4O75676 772 aa20.4■□□□□ 0.86
COMMD4-212ENST00000565517 ADRA2BP18089 450 aa20.39■□□□□ 0.85
COMMD4-212ENST00000565517 POLD1P28340 1107 aa20.39■□□□□ 0.85
COMMD4-212ENST00000565517 CRKLP46109 303 aaKnown RBP20.39■□□□□ 0.85
COMMD4-212ENST00000565517 DCTN1Q14203 1278 aa20.39■□□□□ 0.85
COMMD4-212ENST00000565517 DNAJC10Q8IXB1 793 aa20.39■□□□□ 0.85
COMMD4-212ENST00000565517 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
COMMD4-212ENST00000565517 ANP32CO43423 234 aa20.38■□□□□ 0.85
COMMD4-212ENST00000565517 PHF14O94880 888 aa20.38■□□□□ 0.85
COMMD4-212ENST00000565517 TAF7Q15545 349 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-212ENST00000565517 TRAPPC3LQ5T215 181 aa20.38■□□□□ 0.85
COMMD4-212ENST00000565517 RUNDC1Q96C34 613 aa20.38■□□□□ 0.85
COMMD4-212ENST00000565517 CYP19A1P11511 503 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-212ENST00000565517 ZNF496Q96IT1 587 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-212ENST00000565517 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
COMMD4-212ENST00000565517 ARXQ96QS3 562 aa20.37■□□□□ 0.85
COMMD4-212ENST00000565517 TEX13AQ9BXU3 409 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-212ENST00000565517 HEG1Q9ULI3 1381 aa20.36■□□□□ 0.85
COMMD4-212ENST00000565517 TMPOP42166 694 aaKnown RBP20.36■□□□□ 0.85
COMMD4-212ENST00000565517 INTS5Q6P9B9 1019 aaKnown RBP20.36■□□□□ 0.85
COMMD4-212ENST00000565517 SMIM5Q71RC9 77 aa20.36■□□□□ 0.85
COMMD4-212ENST00000565517 RIPK4P57078 832 aa20.35■□□□□ 0.85
COMMD4-212ENST00000565517 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
COMMD4-212ENST00000565517 STARD3NLO95772 234 aa20.34■□□□□ 0.85
COMMD4-212ENST00000565517 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
COMMD4-212ENST00000565517 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
COMMD4-212ENST00000565517 ARHGEF1Q92888 912 aaKnown RBP20.34■□□□□ 0.85
COMMD4-212ENST00000565517 C4AP0C0L4 1744 aa20.33■□□□□ 0.85
COMMD4-212ENST00000565517 KCNQ3O43525 872 aa20.33■□□□□ 0.85
COMMD4-212ENST00000565517 CCDC146Q8IYE0 955 aa20.33■□□□□ 0.85
COMMD4-212ENST00000565517 RFC4P35249 363 aa20.32■□□□□ 0.84
COMMD4-212ENST00000565517 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
COMMD4-212ENST00000565517 MSL1Q68DK7 614 aa20.31■□□□□ 0.84
COMMD4-212ENST00000565517 FHDC1Q9C0D6 1143 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms