RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
TRAPPC2L-210ENST00000565309 LRRC4BQ9NT99 713 aa17.33■□□□□ 0.36
TRAPPC2L-210ENST00000565309 HTATSF1O43719 755 aaKnown RBP17.32■□□□□ 0.36
TRAPPC2L-210ENST00000565309 SLC27A3Q5K4L6 730 aa17.32■□□□□ 0.36
TRAPPC2L-210ENST00000565309 MCM10Q7L590 875 aa17.32■□□□□ 0.36
TRAPPC2L-210ENST00000565309 LY75O60449 1722 aa17.32■□□□□ 0.36
TRAPPC2L-210ENST00000565309 MRC1P22897 1456 aa17.31■□□□□ 0.36
TRAPPC2L-210ENST00000565309 TEFQ10587 303 aa17.31■□□□□ 0.36
TRAPPC2L-210ENST00000565309 DCTN1Q14203 1278 aa17.31■□□□□ 0.36
TRAPPC2L-210ENST00000565309 NBPF14Q5TI25 921 aa17.31■□□□□ 0.36
TRAPPC2L-210ENST00000565309 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC2L-210ENST00000565309 CEMIPQ8WUJ3 1361 aa17.3■□□□□ 0.36
TRAPPC2L-210ENST00000565309 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
TRAPPC2L-210ENST00000565309 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
TRAPPC2L-210ENST00000565309 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
TRAPPC2L-210ENST00000565309 SIK1P57059 783 aa17.29■□□□□ 0.36
TRAPPC2L-210ENST00000565309 RIPK4P57078 832 aa17.29■□□□□ 0.36
TRAPPC2L-210ENST00000565309 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
TRAPPC2L-210ENST00000565309 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC2L-210ENST00000565309 RRP7AQ9Y3A4 280 aaKnown RBP17.29■□□□□ 0.36
TRAPPC2L-210ENST00000565309 SLC39A6Q13433 755 aa17.28■□□□□ 0.36
TRAPPC2L-210ENST00000565309 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
TRAPPC2L-210ENST00000565309 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
TRAPPC2L-210ENST00000565309 PSDA5PKW4 1024 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC2L-210ENST00000565309 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
TRAPPC2L-210ENST00000565309 APAF1O14727 1248 aa17.26■□□□□ 0.35
TRAPPC2L-210ENST00000565309 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
TRAPPC2L-210ENST00000565309 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
TRAPPC2L-210ENST00000565309 ATP6V1AP38606 617 aa17.25■□□□□ 0.35
TRAPPC2L-210ENST00000565309 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
TRAPPC2L-210ENST00000565309 SLC4A9Q96Q91 983 aa17.25■□□□□ 0.35
TRAPPC2L-210ENST00000565309 STK32BQ9NY57 414 aa17.25■□□□□ 0.35
TRAPPC2L-210ENST00000565309 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC2L-210ENST00000565309 PAPPAQ13219 1627 aa17.25■□□□□ 0.35
TRAPPC2L-210ENST00000565309 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
TRAPPC2L-210ENST00000565309 LMOD3Q0VAK6 560 aa17.24■□□□□ 0.35
TRAPPC2L-210ENST00000565309 ITPK1Q13572 414 aa17.24■□□□□ 0.35
TRAPPC2L-210ENST00000565309 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
TRAPPC2L-210ENST00000565309 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
TRAPPC2L-210ENST00000565309 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
TRAPPC2L-210ENST00000565309 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC2L-210ENST00000565309 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
TRAPPC2L-210ENST00000565309 TTC5Q8N0Z6 440 aa17.23■□□□□ 0.35
TRAPPC2L-210ENST00000565309 MIER1Q8N108 512 aa17.23■□□□□ 0.35
TRAPPC2L-210ENST00000565309 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
TRAPPC2L-210ENST00000565309 C5P01031 1676 aa17.23■□□□□ 0.35
TRAPPC2L-210ENST00000565309 HMGB2P26583 209 aaKnown RBP17.22■□□□□ 0.35
TRAPPC2L-210ENST00000565309 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
TRAPPC2L-210ENST00000565309 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
TRAPPC2L-210ENST00000565309 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
TRAPPC2L-210ENST00000565309 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
TRAPPC2L-210ENST00000565309 KCNQ3O43525 872 aa17.21■□□□□ 0.35
TRAPPC2L-210ENST00000565309 MIS18AQ9NYP9 233 aa17.21■□□□□ 0.35
TRAPPC2L-210ENST00000565309 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.34
TRAPPC2L-210ENST00000565309 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC2L-210ENST00000565309 TFCP2L1Q9NZI6 479 aa17.2■□□□□ 0.34
TRAPPC2L-210ENST00000565309 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
TRAPPC2L-210ENST00000565309 UBR2Q8IWV8 1755 aa17.19■□□□□ 0.34
TRAPPC2L-210ENST00000565309 C4BP0C0L5 1744 aa17.18■□□□□ 0.34
TRAPPC2L-210ENST00000565309 AK7Q96M32 723 aa17.18■□□□□ 0.34
TRAPPC2L-210ENST00000565309 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
TRAPPC2L-210ENST00000565309 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC2L-210ENST00000565309 DNAJC10Q8IXB1 793 aa17.17■□□□□ 0.34
TRAPPC2L-210ENST00000565309 VSIG10Q8N0Z9 540 aa17.17■□□□□ 0.34
TRAPPC2L-210ENST00000565309 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
TRAPPC2L-210ENST00000565309 TJP1Q07157 1748 aa17.16■□□□□ 0.34
TRAPPC2L-210ENST00000565309 GNPATO15228 680 aa17.15■□□□□ 0.34
TRAPPC2L-210ENST00000565309 CRKLP46109 303 aaKnown RBP17.15■□□□□ 0.34
TRAPPC2L-210ENST00000565309 RC3H1Q5TC82 1133 aaKnown RBP17.15■□□□□ 0.34
TRAPPC2L-210ENST00000565309 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
TRAPPC2L-210ENST00000565309 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
TRAPPC2L-210ENST00000565309 COL5A3P25940 1745 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC2L-210ENST00000565309 PNPLA7Q6ZV29 1317 aa17.15■□□□□ 0.34
TRAPPC2L-210ENST00000565309 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.34
TRAPPC2L-210ENST00000565309 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC2L-210ENST00000565309 CYP19A1P11511 503 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC2L-210ENST00000565309 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
TRAPPC2L-210ENST00000565309 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
TRAPPC2L-210ENST00000565309 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC2L-210ENST00000565309 CNTNAP4Q9C0A0 1308 aa17.14■□□□□ 0.33
TRAPPC2L-210ENST00000565309 KDM3BQ7LBC6 1761 aa17.13■□□□□ 0.33
TRAPPC2L-210ENST00000565309 MSH5O43196 834 aa17.13■□□□□ 0.33
TRAPPC2L-210ENST00000565309 PHF14O94880 888 aa17.13■□□□□ 0.33
TRAPPC2L-210ENST00000565309 STARD3NLO95772 234 aa17.13■□□□□ 0.33
TRAPPC2L-210ENST00000565309 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC2L-210ENST00000565309 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC2L-210ENST00000565309 BABAM1Q9NWV8 329 aa17.13■□□□□ 0.33
TRAPPC2L-210ENST00000565309 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
TRAPPC2L-210ENST00000565309 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 MYH14Q7Z406 1995 aaKnown RBP17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 CHL1O00533 1208 aa17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 EIF4A1P60842 406 aaKnown RBP17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 INTS5Q6P9B9 1019 aaKnown RBP17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
TRAPPC2L-210ENST00000565309 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms