RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
NSMCE1-208ENST00000565070 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
NSMCE1-208ENST00000565070 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
NSMCE1-208ENST00000565070 PDE3AQ14432 1141 aa16.29■□□□□ 0.2
NSMCE1-208ENST00000565070 POTEAQ6S8J7 498 aa16.29■□□□□ 0.2
NSMCE1-208ENST00000565070 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
NSMCE1-208ENST00000565070 MCM10Q7L590 875 aa16.28■□□□□ 0.2
NSMCE1-208ENST00000565070 RBM19Q9Y4C8 960 aaKnown RBP16.28■□□□□ 0.2
NSMCE1-208ENST00000565070 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
NSMCE1-208ENST00000565070 IL17REQ8NFR9 667 aa16.27■□□□□ 0.2
NSMCE1-208ENST00000565070 BRWD3Q6RI45 1802 aa16.27■□□□□ 0.2
NSMCE1-208ENST00000565070 ERVV-2B6SEH9 535 aa16.27■□□□□ 0.19
NSMCE1-208ENST00000565070 TEFQ10587 303 aa16.27■□□□□ 0.19
NSMCE1-208ENST00000565070 MARCH10Q8NA82 808 aaPredicted RBP16.27■□□□□ 0.19
NSMCE1-208ENST00000565070 MRC1P22897 1456 aa16.26■□□□□ 0.19
NSMCE1-208ENST00000565070 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
NSMCE1-208ENST00000565070 TSR2Q969E8 191 aaKnown RBP16.26■□□□□ 0.19
NSMCE1-208ENST00000565070 BCL9O00512 1426 aa16.26■□□□□ 0.19
NSMCE1-208ENST00000565070 ZNF853P0CG23 659 aa16.25■□□□□ 0.19
NSMCE1-208ENST00000565070 LGR6Q9HBX8 967 aa16.25■□□□□ 0.19
NSMCE1-208ENST00000565070 SIPA1L3O60292 1781 aaPredicted RBP16.25■□□□□ 0.19
NSMCE1-208ENST00000565070 GNAI1P63096 354 aa16.25■□□□□ 0.19
NSMCE1-208ENST00000565070 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
NSMCE1-208ENST00000565070 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
NSMCE1-208ENST00000565070 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
NSMCE1-208ENST00000565070 RGS12O14924 1447 aa16.24■□□□□ 0.19
NSMCE1-208ENST00000565070 DOT1LQ8TEK3 1739 aa16.24■□□□□ 0.19
NSMCE1-208ENST00000565070 TOGARAM1Q9Y4F4 1720 aa16.24■□□□□ 0.19
NSMCE1-208ENST00000565070 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
NSMCE1-208ENST00000565070 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
NSMCE1-208ENST00000565070 CABP4P57796 275 aa16.23■□□□□ 0.19
NSMCE1-208ENST00000565070 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
NSMCE1-208ENST00000565070 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
NSMCE1-208ENST00000565070 ITGB4P16144 1822 aa16.23■□□□□ 0.19
NSMCE1-208ENST00000565070 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
NSMCE1-208ENST00000565070 KDM2BQ8NHM5 1336 aa16.22■□□□□ 0.19
NSMCE1-208ENST00000565070 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
NSMCE1-208ENST00000565070 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
NSMCE1-208ENST00000565070 FAM196AQ6ZSG2 479 aa16.2■□□□□ 0.18
NSMCE1-208ENST00000565070 LAS1LQ9Y4W2 734 aaKnown RBP16.2■□□□□ 0.18
NSMCE1-208ENST00000565070 CHL1O00533 1208 aa16.2■□□□□ 0.18
NSMCE1-208ENST00000565070 KDM3BQ7LBC6 1761 aa16.19■□□□□ 0.18
NSMCE1-208ENST00000565070 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
NSMCE1-208ENST00000565070 BTBD11A6QL63 1104 aa16.19■□□□□ 0.18
NSMCE1-208ENST00000565070 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
NSMCE1-208ENST00000565070 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
NSMCE1-208ENST00000565070 MBIPQ9NS73 344 aa16.19■□□□□ 0.18
NSMCE1-208ENST00000565070 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
NSMCE1-208ENST00000565070 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
NSMCE1-208ENST00000565070 AAMPQ13685 434 aa16.18■□□□□ 0.18
NSMCE1-208ENST00000565070 CENPQQ7L2Z9 268 aaPredicted RBP16.18■□□□□ 0.18
NSMCE1-208ENST00000565070 PANK1Q8TE04 598 aa16.18■□□□□ 0.18
NSMCE1-208ENST00000565070 BCL2L13Q9BXK5 485 aa16.18■□□□□ 0.18
NSMCE1-208ENST00000565070 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
NSMCE1-208ENST00000565070 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
NSMCE1-208ENST00000565070 SYTL4Q96C24 671 aaPredicted RBP16.17■□□□□ 0.18
NSMCE1-208ENST00000565070 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
NSMCE1-208ENST00000565070 TCERG1O14776 1098 aaKnown RBP16.16■□□□□ 0.18
NSMCE1-208ENST00000565070 ZKSCAN2Q63HK3 967 aa16.16■□□□□ 0.18
NSMCE1-208ENST00000565070 TTC5Q8N0Z6 440 aa16.16■□□□□ 0.18
NSMCE1-208ENST00000565070 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
NSMCE1-208ENST00000565070 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
NSMCE1-208ENST00000565070 COG6Q9Y2V7 657 aa16.16■□□□□ 0.18
NSMCE1-208ENST00000565070 RLBP1P12271 317 aa16.15■□□□□ 0.18
NSMCE1-208ENST00000565070 ALDH1L2Q3SY69 923 aa16.15■□□□□ 0.18
NSMCE1-208ENST00000565070 PIGBQ92521 554 aa16.15■□□□□ 0.18
NSMCE1-208ENST00000565070 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
NSMCE1-208ENST00000565070 MS4A1P11836 297 aa16.14■□□□□ 0.17
NSMCE1-208ENST00000565070 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
NSMCE1-208ENST00000565070 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
NSMCE1-208ENST00000565070 CLUAP1Q96AJ1 413 aa16.14■□□□□ 0.17
NSMCE1-208ENST00000565070 UBR2Q8IWV8 1755 aa16.14■□□□□ 0.17
NSMCE1-208ENST00000565070 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
NSMCE1-208ENST00000565070 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
NSMCE1-208ENST00000565070 MIS18AQ9NYP9 233 aa16.14■□□□□ 0.17
NSMCE1-208ENST00000565070 SMARCC1Q92922 1105 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-208ENST00000565070 BCL11BQ9C0K0 894 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-208ENST00000565070 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
NSMCE1-208ENST00000565070 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-208ENST00000565070 BTAF1O14981 1849 aa16.13■□□□□ 0.17
NSMCE1-208ENST00000565070 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
NSMCE1-208ENST00000565070 KIF16BQ96L93 1317 aa16.12■□□□□ 0.17
NSMCE1-208ENST00000565070 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
NSMCE1-208ENST00000565070 KCNQ2O43526 872 aa16.11■□□□□ 0.17
NSMCE1-208ENST00000565070 VAMP4O75379 141 aa16.11■□□□□ 0.17
NSMCE1-208ENST00000565070 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
NSMCE1-208ENST00000565070 MVPQ14764 893 aaKnown RBP16.11■□□□□ 0.17
NSMCE1-208ENST00000565070 DZIP1LQ8IYY4 767 aaKnown RBP16.11■□□□□ 0.17
NSMCE1-208ENST00000565070 FMNL2Q96PY5 1086 aa16.11■□□□□ 0.17
NSMCE1-208ENST00000565070 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
NSMCE1-208ENST00000565070 TRIM27P14373 513 aa16.1■□□□□ 0.17
NSMCE1-208ENST00000565070 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
NSMCE1-208ENST00000565070 ATF7IPQ6VMQ6 1270 aa16.1■□□□□ 0.17
NSMCE1-208ENST00000565070 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
NSMCE1-208ENST00000565070 HOXB7P09629 217 aa16.1■□□□□ 0.17
NSMCE1-208ENST00000565070 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
NSMCE1-208ENST00000565070 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
NSMCE1-208ENST00000565070 FTSJ3Q8IY81 847 aaKnown RBP16.09■□□□□ 0.17
NSMCE1-208ENST00000565070 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
NSMCE1-208ENST00000565070 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms