RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 NEFMP07197 916 aa24.73■■□□□ 1.55
PKD1-229ENST00000564890 VIRMAQ69YN4 1812 aaKnown RBP24.72■■□□□ 1.55
PKD1-229ENST00000564890 C5P01031 1676 aa24.72■■□□□ 1.55
PKD1-229ENST00000564890 IL17REQ8NFR9 667 aa24.71■■□□□ 1.55
PKD1-229ENST00000564890 PLEKHF1Q96S99 279 aa24.71■■□□□ 1.55
PKD1-229ENST00000564890 RBM42Q9BTD8 480 aaKnown RBP24.71■■□□□ 1.55
PKD1-229ENST00000564890 PDGFDQ9GZP0 370 aaPredicted RBP24.71■■□□□ 1.55
PKD1-229ENST00000564890 PNNQ9H307 717 aaKnown RBP24.71■■□□□ 1.55
PKD1-229ENST00000564890 HMGB2P26583 209 aaKnown RBP24.7■■□□□ 1.54
PKD1-229ENST00000564890 ATP6V1AP38606 617 aa24.69■■□□□ 1.54
PKD1-229ENST00000564890 TFCP2L1Q9NZI6 479 aa24.69■■□□□ 1.54
PKD1-229ENST00000564890 TAF1LQ8IZX4 1826 aa24.69■■□□□ 1.54
PKD1-229ENST00000564890 CASZ1Q86V15 1759 aa24.69■■□□□ 1.54
PKD1-229ENST00000564890 WDR43Q15061 677 aaKnown RBP eCLIP24.68■■□□□ 1.54
PKD1-229ENST00000564890 MAPK8IP3Q9UPT6 1336 aa24.67■■□□□ 1.54
PKD1-229ENST00000564890 ANP32CO43423 234 aa24.67■■□□□ 1.54
PKD1-229ENST00000564890 TEFQ10587 303 aa24.67■■□□□ 1.54
PKD1-229ENST00000564890 ITPK1Q13572 414 aa24.67■■□□□ 1.54
PKD1-229ENST00000564890 RTF1Q92541 710 aaKnown RBP24.67■■□□□ 1.54
PKD1-229ENST00000564890 LRP5O75197 1615 aa24.66■■□□□ 1.54
PKD1-229ENST00000564890 PTCD1O75127 700 aaKnown RBP24.66■■□□□ 1.54
PKD1-229ENST00000564890 LINC00116Q8NCU8 138 aa24.66■■□□□ 1.54
PKD1-229ENST00000564890 SLC4A9Q96Q91 983 aa24.66■■□□□ 1.54
PKD1-229ENST00000564890 CEMIPQ8WUJ3 1361 aa24.66■■□□□ 1.54
PKD1-229ENST00000564890 C4BP0C0L5 1744 aa24.65■■□□□ 1.54
PKD1-229ENST00000564890 SLC39A6Q13433 755 aa24.65■■□□□ 1.54
PKD1-229ENST00000564890 TUBGCP6Q96RT7 1819 aa24.65■■□□□ 1.54
PKD1-229ENST00000564890 PNPLA7Q6ZV29 1317 aa24.64■■□□□ 1.54
PKD1-229ENST00000564890 MCM10Q7L590 875 aa24.64■■□□□ 1.54
PKD1-229ENST00000564890 AK7Q96M32 723 aa24.64■■□□□ 1.54
PKD1-229ENST00000564890 QSER1Q2KHR3 1735 aa24.64■■□□□ 1.53
PKD1-229ENST00000564890 HTATSF1O43719 755 aaKnown RBP24.63■■□□□ 1.53
PKD1-229ENST00000564890 ZBTB7AO95365 584 aa24.63■■□□□ 1.53
PKD1-229ENST00000564890 NFE2L2Q16236 605 aa24.63■■□□□ 1.53
PKD1-229ENST00000564890 SPON1Q9HCB6 807 aa24.63■■□□□ 1.53
PKD1-229ENST00000564890 ZNF831Q5JPB2 1677 aa24.62■■□□□ 1.53
PKD1-229ENST00000564890 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
PKD1-229ENST00000564890 ADAMTS8Q9UP79 889 aa24.61■■□□□ 1.53
PKD1-229ENST00000564890 SIPA1L3O60292 1781 aaPredicted RBP24.6■■□□□ 1.53
PKD1-229ENST00000564890 CCDC146Q8IYE0 955 aa24.6■■□□□ 1.53
PKD1-229ENST00000564890 SRCAPQ6ZRS2 3230 aa24.59■■□□□ 1.53
PKD1-229ENST00000564890 CCDC184Q52MB2 194 aa24.59■■□□□ 1.53
PKD1-229ENST00000564890 TTC5Q8N0Z6 440 aa24.59■■□□□ 1.53
PKD1-229ENST00000564890 ATF5Q9Y2D1 282 aaPredicted RBP24.59■■□□□ 1.53
PKD1-229ENST00000564890 KCPQ6ZWJ8 1503 aa24.59■■□□□ 1.53
PKD1-229ENST00000564890 DLG5Q8TDM6 1919 aa24.59■■□□□ 1.53
PKD1-229ENST00000564890 MSH5O43196 834 aa24.58■■□□□ 1.53
PKD1-229ENST00000564890 COL23A1Q86Y22 540 aaPredicted RBP24.58■■□□□ 1.53
PKD1-229ENST00000564890 MTFR1LQ9H019 292 aa24.58■■□□□ 1.53
PKD1-229ENST00000564890 GNPATO15228 680 aa24.57■■□□□ 1.52
PKD1-229ENST00000564890 RUNDC1Q96C34 613 aa24.57■■□□□ 1.52
PKD1-229ENST00000564890 COL5A3P25940 1745 aaPredicted RBP24.56■■□□□ 1.52
PKD1-229ENST00000564890 BTBD11A6QL63 1104 aa24.56■■□□□ 1.52
PKD1-229ENST00000564890 PHF14O94880 888 aa24.56■■□□□ 1.52
PKD1-229ENST00000564890 ZNF790Q6PG37 636 aa24.56■■□□□ 1.52
PKD1-229ENST00000564890 AMIGO3Q86WK7 504 aa24.56■■□□□ 1.52
PKD1-229ENST00000564890 FLAD1Q8NFF5 587 aa24.56■■□□□ 1.52
PKD1-229ENST00000564890 SLC16A10Q8TF71 515 aa24.56■■□□□ 1.52
PKD1-229ENST00000564890 UBR3Q6ZT12 1888 aa24.55■■□□□ 1.52
PKD1-229ENST00000564890 TJP1Q07157 1748 aa24.55■■□□□ 1.52
PKD1-229ENST00000564890 TMPOP42166 694 aaKnown RBP24.55■■□□□ 1.52
PKD1-229ENST00000564890 SMIM5Q71RC9 77 aa24.55■■□□□ 1.52
PKD1-229ENST00000564890 CNTNAP4Q9C0A0 1308 aa24.55■■□□□ 1.52
PKD1-229ENST00000564890 UBR2Q8IWV8 1755 aa24.54■■□□□ 1.52
PKD1-229ENST00000564890 CICQ96RK0 1608 aaPredicted RBP24.54■■□□□ 1.52
PKD1-229ENST00000564890 RIPK4P57078 832 aa24.54■■□□□ 1.52
PKD1-229ENST00000564890 RC3H1Q5TC82 1133 aaKnown RBP24.54■■□□□ 1.52
PKD1-229ENST00000564890 DNAJC10Q8IXB1 793 aa24.54■■□□□ 1.52
PKD1-229ENST00000564890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.53■■□□□ 1.52
PKD1-229ENST00000564890 SSFA2P28290 1259 aa24.53■■□□□ 1.52
PKD1-229ENST00000564890 ZNF496Q96IT1 587 aaPredicted RBP24.53■■□□□ 1.52
PKD1-229ENST00000564890 RRP7AQ9Y3A4 280 aaKnown RBP24.53■■□□□ 1.52
PKD1-229ENST00000564890 PTGER2P43116 358 aa24.52■■□□□ 1.52
PKD1-229ENST00000564890 CRKLP46109 303 aaKnown RBP24.52■■□□□ 1.52
PKD1-229ENST00000564890 TAF7Q15545 349 aaPredicted RBP24.52■■□□□ 1.52
PKD1-229ENST00000564890 VSIG10Q8N0Z9 540 aa24.52■■□□□ 1.52
PKD1-229ENST00000564890 THUMPD2Q9BTF0 503 aaKnown RBP24.52■■□□□ 1.52
PKD1-229ENST00000564890 MRS2Q9HD23 443 aa24.52■■□□□ 1.52
PKD1-229ENST00000564890 PPP1R1BQ9UD71 204 aaPredicted RBP24.52■■□□□ 1.52
PKD1-229ENST00000564890 KCNQ3O43525 872 aa24.51■■□□□ 1.51
PKD1-229ENST00000564890 RTCBQ9Y3I0 505 aaKnown RBP24.51■■□□□ 1.51
PKD1-229ENST00000564890 LMOD3Q0VAK6 560 aa24.5■■□□□ 1.51
PKD1-229ENST00000564890 NEUROD2Q15784 382 aa24.5■■□□□ 1.51
PKD1-229ENST00000564890 FMNL2Q96PY5 1086 aa24.5■■□□□ 1.51
PKD1-229ENST00000564890 MYH14Q7Z406 1995 aaKnown RBP24.49■■□□□ 1.51
PKD1-229ENST00000564890 RPS6KA4O75676 772 aa24.49■■□□□ 1.51
PKD1-229ENST00000564890 CYP19A1P11511 503 aaPredicted RBP24.49■■□□□ 1.51
PKD1-229ENST00000564890 SGIP1Q9BQI5 828 aa24.49■■□□□ 1.51
PKD1-229ENST00000564890 HEG1Q9ULI3 1381 aa24.49■■□□□ 1.51
PKD1-229ENST00000564890 MSL1Q68DK7 614 aa24.47■■□□□ 1.51
PKD1-229ENST00000564890 INTS5Q6P9B9 1019 aaKnown RBP24.47■■□□□ 1.51
PKD1-229ENST00000564890 CCDC87Q9NVE4 849 aa24.47■■□□□ 1.51
PKD1-229ENST00000564890 MIS18AQ9NYP9 233 aa24.47■■□□□ 1.51
PKD1-229ENST00000564890 TRAPPC3LQ5T215 181 aa24.46■■□□□ 1.51
PKD1-229ENST00000564890 PNISRQ8TF01 805 aaKnown RBP24.46■■□□□ 1.51
PKD1-229ENST00000564890 ADRA2BP18089 450 aa24.45■■□□□ 1.5
PKD1-229ENST00000564890 POLD1P28340 1107 aa24.45■■□□□ 1.5
PKD1-229ENST00000564890 STARD3NLO95772 234 aa24.44■■□□□ 1.5
PKD1-229ENST00000564890 ARHGEF1Q92888 912 aaKnown RBP24.44■■□□□ 1.5
PKD1-229ENST00000564890 TEX13AQ9BXU3 409 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms