RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 AK9Q5TCS8 1911 aa27.56■■■□□ 2
SPSB3-206ENST00000564709 PNMA6EA0A0J9YXQ4 647 aa27.56■■■□□ 2
SPSB3-206ENST00000564709 RABEP1Q15276 862 aa27.56■■■□□ 2
SPSB3-206ENST00000564709 GOLGA6L3A6NEY3 463 aa27.55■■■□□ 2
SPSB3-206ENST00000564709 PDE1AP54750 535 aa27.55■■■□□ 2
SPSB3-206ENST00000564709 CHD2O14647 1828 aaKnown RBP27.54■■■□□ 2
SPSB3-206ENST00000564709 CACNA1FO60840 1977 aa27.54■■■□□ 2
SPSB3-206ENST00000564709 PLEKHG5O94827 1062 aa27.53■■■□□ 2
SPSB3-206ENST00000564709 EIF5BO60841 1220 aaKnown RBP27.52■■■□□ 2
SPSB3-206ENST00000564709 SSFA2P28290 1259 aa27.52■■■□□ 2
SPSB3-206ENST00000564709 GBP4Q96PP9 640 aa27.52■■■□□ 2
SPSB3-206ENST00000564709 LRRFIP2Q9Y608 721 aaKnown RBP27.52■■■□□ 2
SPSB3-206ENST00000564709 FSD2A1L4K1 749 aa27.52■■■□□ 2
SPSB3-206ENST00000564709 GNAI3P08754 354 aa27.52■■■□□ 2
SPSB3-206ENST00000564709 RGPD2P0DJD1 1756 aa27.51■■■□□ 2
SPSB3-206ENST00000564709 HDGFL1Q5TGJ6 251 aa27.51■■□□□ 1.99
SPSB3-206ENST00000564709 PHAXQ9H814 394 aaKnown RBP27.51■■□□□ 1.99
SPSB3-206ENST00000564709 NBPF6Q5VWK0 638 aa27.51■■□□□ 1.99
SPSB3-206ENST00000564709 NBPF4Q96M43 638 aa27.51■■□□□ 1.99
SPSB3-206ENST00000564709 N4BP2Q86UW6 1770 aaPredicted RBP27.5■■□□□ 1.99
SPSB3-206ENST00000564709 XRCC6P12956 609 aaKnown RBP eCLIP27.5■■□□□ 1.99
SPSB3-206ENST00000564709 LRRCC1Q9C099 1032 aa27.5■■□□□ 1.99
SPSB3-206ENST00000564709 NFAT5O94916 1531 aa27.5■■□□□ 1.99
SPSB3-206ENST00000564709 OSBPL3Q9H4L5 887 aa27.5■■□□□ 1.99
SPSB3-206ENST00000564709 ESCO1Q5FWF5 840 aa27.49■■□□□ 1.99
SPSB3-206ENST00000564709 IP6K1Q92551 441 aa27.49■■□□□ 1.99
SPSB3-206ENST00000564709 TUBGCP6Q96RT7 1819 aa27.49■■□□□ 1.99
SPSB3-206ENST00000564709 ERC2O15083 957 aa27.48■■□□□ 1.99
SPSB3-206ENST00000564709 ATP8B2P98198 1209 aa27.48■■□□□ 1.99
SPSB3-206ENST00000564709 LGR6Q9HBX8 967 aa27.48■■□□□ 1.99
SPSB3-206ENST00000564709 EIF2S2P20042 333 aaKnown RBP27.47■■□□□ 1.99
SPSB3-206ENST00000564709 PANK2Q9BZ23 570 aa27.47■■□□□ 1.99
SPSB3-206ENST00000564709 SALL3Q9BXA9 1300 aa27.47■■□□□ 1.99
SPSB3-206ENST00000564709 REC8O95072 547 aa27.47■■□□□ 1.99
SPSB3-206ENST00000564709 PSME1Q06323 249 aa27.47■■□□□ 1.99
SPSB3-206ENST00000564709 ANKLE2Q86XL3 938 aa27.47■■□□□ 1.99
SPSB3-206ENST00000564709 LRRC59Q96AG4 307 aaKnown RBP27.46■■□□□ 1.99
SPSB3-206ENST00000564709 USP44Q9H0E7 712 aa27.46■■□□□ 1.99
SPSB3-206ENST00000564709 IBTKQ9P2D0 1353 aaPredicted RBP27.45■■□□□ 1.99
SPSB3-206ENST00000564709 MX1P20591 662 aa27.45■■□□□ 1.99
SPSB3-206ENST00000564709 BABAM1Q9NWV8 329 aa27.45■■□□□ 1.99
SPSB3-206ENST00000564709 UBTFL1P0CB47 393 aaPredicted RBP27.45■■□□□ 1.98
SPSB3-206ENST00000564709 PXDNLA1KZ92 1463 aa27.45■■□□□ 1.98
SPSB3-206ENST00000564709 CEMIPQ8WUJ3 1361 aa27.44■■□□□ 1.98
SPSB3-206ENST00000564709 SOS1Q07889 1333 aaPredicted RBP27.44■■□□□ 1.98
SPSB3-206ENST00000564709 XPCQ01831 940 aaPredicted RBP27.44■■□□□ 1.98
SPSB3-206ENST00000564709 KCNQ3O43525 872 aa27.43■■□□□ 1.98
SPSB3-206ENST00000564709 RILPL2Q969X0 211 aa27.41■■□□□ 1.98
SPSB3-206ENST00000564709 MED1Q15648 1581 aaPredicted RBP27.41■■□□□ 1.98
SPSB3-206ENST00000564709 TRIM6-TRIM34B2RNG4 842 aa27.41■■□□□ 1.98
SPSB3-206ENST00000564709 ST18O60284 1047 aa27.41■■□□□ 1.98
SPSB3-206ENST00000564709 EIF4A1P60842 406 aaKnown RBP27.41■■□□□ 1.98
SPSB3-206ENST00000564709 KDM3BQ7LBC6 1761 aa27.41■■□□□ 1.98
SPSB3-206ENST00000564709 IL1RAPL2Q9NP60 686 aa27.41■■□□□ 1.98
SPSB3-206ENST00000564709 CHPF2Q9P2E5 772 aa27.41■■□□□ 1.98
SPSB3-206ENST00000564709 ADGRL3Q9HAR2 1447 aa27.4■■□□□ 1.98
SPSB3-206ENST00000564709 ANXA1P04083 346 aa27.4■■□□□ 1.98
SPSB3-206ENST00000564709 PKP1Q13835 747 aa27.39■■□□□ 1.98
SPSB3-206ENST00000564709 ZNF530Q6P9A1 599 aaPredicted RBP27.39■■□□□ 1.97
SPSB3-206ENST00000564709 ZGPATQ8N5A5 531 aaKnown RBP27.39■■□□□ 1.97
SPSB3-206ENST00000564709 MPRIPQ6WCQ1 1025 aa27.38■■□□□ 1.97
SPSB3-206ENST00000564709 FAM43AQ8N2R8 423 aa27.38■■□□□ 1.97
SPSB3-206ENST00000564709 ESYT1Q9BSJ8 1104 aa27.38■■□□□ 1.97
SPSB3-206ENST00000564709 BAG4O95429 457 aaKnown RBP27.38■■□□□ 1.97
SPSB3-206ENST00000564709 SRCIN1Q9C0H9 1055 aa27.38■■□□□ 1.97
SPSB3-206ENST00000564709 UNC5CLQ8IV45 518 aa27.37■■□□□ 1.97
SPSB3-206ENST00000564709 ORAI2Q96SN7 254 aa27.37■■□□□ 1.97
SPSB3-206ENST00000564709 ZNF142P52746 1687 aaPredicted RBP27.37■■□□□ 1.97
SPSB3-206ENST00000564709 PPP1R42Q7Z4L9 355 aa27.36■■□□□ 1.97
SPSB3-206ENST00000564709 KCNH5Q8NCM2 988 aa27.36■■□□□ 1.97
SPSB3-206ENST00000564709 LMO7Q8WWI1 1683 aa27.36■■□□□ 1.97
SPSB3-206ENST00000564709 LMOD2Q6P5Q4 547 aa27.36■■□□□ 1.97
SPSB3-206ENST00000564709 NUTM1Q86Y26 1132 aa27.36■■□□□ 1.97
SPSB3-206ENST00000564709 TEFQ10587 303 aa27.35■■□□□ 1.97
SPSB3-206ENST00000564709 GRPEL1Q9HAV7 217 aa27.35■■□□□ 1.97
SPSB3-206ENST00000564709 PXDNQ92626 1479 aa27.35■■□□□ 1.97
SPSB3-206ENST00000564709 MRE11P49959 708 aa27.35■■□□□ 1.97
SPSB3-206ENST00000564709 BTBD11A6QL63 1104 aa27.34■■□□□ 1.97
SPSB3-206ENST00000564709 NBPF7P0C2Y1 421 aaPredicted RBP27.34■■□□□ 1.97
SPSB3-206ENST00000564709 CHMLP26374 656 aa27.34■■□□□ 1.97
SPSB3-206ENST00000564709 SKOR2Q2VWA4 1001 aaPredicted RBP27.34■■□□□ 1.97
SPSB3-206ENST00000564709 SSH3Q8TE77 659 aa27.34■■□□□ 1.97
SPSB3-206ENST00000564709 PI4KAP2A4QPH2 592 aa27.34■■□□□ 1.97
SPSB3-206ENST00000564709 PI4KAP1Q8N8J0 262 aa27.34■■□□□ 1.97
SPSB3-206ENST00000564709 GOLGA6L22H0YM25 854 aa27.33■■□□□ 1.97
SPSB3-206ENST00000564709 SURF6O75683 361 aaKnown RBP27.33■■□□□ 1.97
SPSB3-206ENST00000564709 GAS2L3Q86XJ1 694 aa27.33■■□□□ 1.97
SPSB3-206ENST00000564709 ANO2Q9NQ90 1003 aa27.33■■□□□ 1.97
SPSB3-206ENST00000564709 STAP2Q9UGK3 403 aa27.33■■□□□ 1.97
SPSB3-206ENST00000564709 PALD1Q9ULE6 856 aa27.33■■□□□ 1.97
SPSB3-206ENST00000564709 AKAP4Q5JQC9 854 aa27.33■■□□□ 1.97
SPSB3-206ENST00000564709 PHRF1Q9P1Y6 1649 aaKnown RBP27.32■■□□□ 1.96
SPSB3-206ENST00000564709 PTMSP20962 102 aa27.32■■□□□ 1.96
SPSB3-206ENST00000564709 NEK4P51957 841 aa27.32■■□□□ 1.96
SPSB3-206ENST00000564709 CLEC17AQ6ZS10 378 aa27.32■■□□□ 1.96
SPSB3-206ENST00000564709 MAP4K4O95819 1239 aaPredicted RBP27.32■■□□□ 1.96
SPSB3-206ENST00000564709 NUCB2P80303 420 aa27.32■■□□□ 1.96
SPSB3-206ENST00000564709 MCTP1Q6DN14 999 aa27.32■■□□□ 1.96
SPSB3-206ENST00000564709 DNAAF4Q8WXU2 420 aa27.32■■□□□ 1.96
SPSB3-206ENST00000564709 SRGAP3O43295 1099 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms