RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PDAP1Q13442 181 aaKnown RBP9.35□□□□□ -0.91
ATXN3-249ENST00000564606 SULT6B1Q6IMI4 303 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 CYB5RLQ6IPT4 315 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 TXNDC2Q86VQ3 553 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 PHACTR3Q96KR7 559 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 OSBPL3Q9H4L5 887 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 BRPF3Q9ULD4 1205 aa9.35□□□□□ -0.91
ATXN3-249ENST00000564606 DIP2AQ14689 1571 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 SSH2Q76I76 1423 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 PHF14O94880 888 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 MBD3O95983 291 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 PRKCSHP14314 528 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-249ENST00000564606 DDIT3P35638 169 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 CCDC173Q0VFZ6 552 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 KLHL40Q2TBA0 621 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 GLIPR1L2Q4G1C9 344 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 GRPEL1Q9HAV7 217 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 TRPC6Q9Y210 931 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 TBX22Q9Y458 520 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 AKAP12Q02952 1782 aa9.34□□□□□ -0.91
ATXN3-249ENST00000564606 SETD1AO15047 1707 aaKnown RBP9.34□□□□□ -0.92
ATXN3-249ENST00000564606 C3P01024 1663 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 USP6P35125 1406 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 ANKARQ7Z5J8 1434 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 HOXB7P09629 217 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 CLCN1P35523 988 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 AMPHP49418 695 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 EIF4A2Q14240 407 aaKnown RBP9.33□□□□□ -0.92
ATXN3-249ENST00000564606 HS1BP3Q53T59 392 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 CADPS2Q86UW7 1296 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 THEMISQ8N1K5 641 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-249ENST00000564606 TNPO1Q92973 898 aaKnown RBP9.33□□□□□ -0.92
ATXN3-249ENST00000564606 MFRPQ9BY79 579 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 TSPYL4Q9UJ04 414 aa9.33□□□□□ -0.92
ATXN3-249ENST00000564606 ACEP12821 1306 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 OVOS2A0A0J9YW53 1432 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 OVOS2Q6IE36 1432 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 PTPRUQ92729 1446 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 CD44P16070 742 aaKnown RBP9.32□□□□□ -0.92
ATXN3-249ENST00000564606 CSPP1Q1MSJ5 1256 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 CEP85Q6P2H3 762 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 C8orf58Q8NAV2 365 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 NGDNQ8NEJ9 315 aaKnown RBP9.32□□□□□ -0.92
ATXN3-249ENST00000564606 METP08581 1390 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 PXDNLA1KZ92 1463 aa9.32□□□□□ -0.92
ATXN3-249ENST00000564606 ELL2O00472 640 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-249ENST00000564606 TSPYL6Q8N831 410 aa9.31□□□□□ -0.92
ATXN3-249ENST00000564606 INTS4Q96HW7 963 aaKnown RBP9.31□□□□□ -0.92
ATXN3-249ENST00000564606 USP26Q9BXU7 913 aa9.31□□□□□ -0.92
ATXN3-249ENST00000564606 LRRCC1Q9C099 1032 aa9.31□□□□□ -0.92
ATXN3-249ENST00000564606 ATP6V1DQ9Y5K8 247 aa9.31□□□□□ -0.92
ATXN3-249ENST00000564606 DDX49Q9Y6V7 483 aaKnown RBP9.31□□□□□ -0.92
ATXN3-249ENST00000564606 MSH6P52701 1360 aa9.31□□□□□ -0.92
ATXN3-249ENST00000564606 KDRP35968 1356 aa9.3□□□□□ -0.92
ATXN3-249ENST00000564606 GNAT3A8MTJ3 354 aa9.3□□□□□ -0.92
ATXN3-249ENST00000564606 PPP1R37O75864 691 aa9.3□□□□□ -0.92
ATXN3-249ENST00000564606 LETM1O95202 739 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-249ENST00000564606 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
ATXN3-249ENST00000564606 MLECQ14165 292 aa9.3□□□□□ -0.92
ATXN3-249ENST00000564606 RRS1Q15050 365 aaKnown RBP9.3□□□□□ -0.92
ATXN3-249ENST00000564606 RUFY2Q8WXA3 655 aa9.3□□□□□ -0.92
ATXN3-249ENST00000564606 GPATCH3Q96I76 525 aa9.3□□□□□ -0.92
ATXN3-249ENST00000564606 MSNP26038 577 aaKnown RBP9.29□□□□□ -0.92
ATXN3-249ENST00000564606 NRXN3Q9Y4C0 1643 aa9.29□□□□□ -0.92
ATXN3-249ENST00000564606 ADGRL3Q9HAR2 1447 aa9.29□□□□□ -0.92
ATXN3-249ENST00000564606 IGSF1Q8N6C5 1336 aa9.29□□□□□ -0.92
ATXN3-249ENST00000564606 C19orf67A6NJJ6 358 aa9.28□□□□□ -0.92
ATXN3-249ENST00000564606 MCM5P33992 734 aa9.28□□□□□ -0.92
ATXN3-249ENST00000564606 ZNF445P59923 1031 aa9.28□□□□□ -0.92
ATXN3-249ENST00000564606 ATP8B2P98198 1209 aa9.28□□□□□ -0.92
ATXN3-249ENST00000564606 TAF7Q15545 349 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-249ENST00000564606 KIAA1211Q6ZU35 1233 aa9.28□□□□□ -0.92
ATXN3-249ENST00000564606 SIRT2Q8IXJ6 389 aa9.28□□□□□ -0.92
ATXN3-249ENST00000564606 EFCAB3Q8N7B9 438 aa9.28□□□□□ -0.92
ATXN3-249ENST00000564606 KCNH5Q8NCM2 988 aa9.28□□□□□ -0.92
ATXN3-249ENST00000564606 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-249ENST00000564606 TOPAZ1Q8N9V7 1692 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 ESPNB1AK53 854 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 HIP1O00291 1037 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 BAG4O95429 457 aaKnown RBP9.27□□□□□ -0.93
ATXN3-249ENST00000564606 UBTFL1P0CB47 393 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-249ENST00000564606 SDSP20132 328 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 NASPP49321 788 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-249ENST00000564606 EVX2Q03828 476 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 FKBP5Q13451 457 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-249ENST00000564606 ERC1Q8IUD2 1116 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 THUMPD2Q9BTF0 503 aaKnown RBP9.27□□□□□ -0.93
ATXN3-249ENST00000564606 C1orf115Q9H7X2 142 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 CRB1P82279 1406 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 ADAMTS13Q76LX8 1427 aa9.27□□□□□ -0.93
ATXN3-249ENST00000564606 SLIT1O75093 1534 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 ROBO2Q9HCK4 1378 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 ATP10DQ9P241 1426 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 TPM2P07951 284 aa9.26□□□□□ -0.93
ATXN3-249ENST00000564606 GSPT1P15170 499 aaKnown RBP9.26□□□□□ -0.93
ATXN3-249ENST00000564606 MX1P20591 662 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms