RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 MSL1Q68DK7 614 aa20.36■□□□□ 0.85
SCAMP2-205ENST00000564529 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
SCAMP2-205ENST00000564529 PNISRQ8TF01 805 aaKnown RBP20.35■□□□□ 0.85
SCAMP2-205ENST00000564529 HMOX1P09601 288 aa20.34■□□□□ 0.85
SCAMP2-205ENST00000564529 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
SCAMP2-205ENST00000564529 PLEKHF1Q96S99 279 aa20.33■□□□□ 0.85
SCAMP2-205ENST00000564529 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
SCAMP2-205ENST00000564529 IFFO2Q5TF58 517 aa20.32■□□□□ 0.84
SCAMP2-205ENST00000564529 PNNQ9H307 717 aaKnown RBP20.32■□□□□ 0.84
SCAMP2-205ENST00000564529 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
SCAMP2-205ENST00000564529 MRS2Q9HD23 443 aa20.31■□□□□ 0.84
SCAMP2-205ENST00000564529 ATP10DQ9P241 1426 aa20.3■□□□□ 0.84
SCAMP2-205ENST00000564529 NKX1-1Q15270 411 aaPredicted RBP20.3■□□□□ 0.84
SCAMP2-205ENST00000564529 MIER1Q8N108 512 aa20.3■□□□□ 0.84
SCAMP2-205ENST00000564529 ADAMTS8Q9UP79 889 aa20.3■□□□□ 0.84
SCAMP2-205ENST00000564529 CD2APQ9Y5K6 639 aa20.3■□□□□ 0.84
SCAMP2-205ENST00000564529 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
SCAMP2-205ENST00000564529 CYP27B1O15528 508 aa20.28■□□□□ 0.84
SCAMP2-205ENST00000564529 WDR43Q15061 677 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCAMP2-205ENST00000564529 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
SCAMP2-205ENST00000564529 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
SCAMP2-205ENST00000564529 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
SCAMP2-205ENST00000564529 FLAD1Q8NFF5 587 aa20.27■□□□□ 0.84
SCAMP2-205ENST00000564529 PKD1L3Q7Z443 1732 aa20.27■□□□□ 0.83
SCAMP2-205ENST00000564529 C5P01031 1676 aa20.26■□□□□ 0.83
SCAMP2-205ENST00000564529 PALLDQ8WX93 1383 aa20.26■□□□□ 0.83
SCAMP2-205ENST00000564529 PHKG2P15735 406 aa20.26■□□□□ 0.83
SCAMP2-205ENST00000564529 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
SCAMP2-205ENST00000564529 IFNL2Q8IZJ0 200 aa20.26■□□□□ 0.83
SCAMP2-205ENST00000564529 MPRIPQ6WCQ1 1025 aa20.25■□□□□ 0.83
SCAMP2-205ENST00000564529 GPBP1L1Q9HC44 474 aaPredicted RBP20.25■□□□□ 0.83
SCAMP2-205ENST00000564529 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
SCAMP2-205ENST00000564529 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
SCAMP2-205ENST00000564529 HMGB2P26583 209 aaKnown RBP20.23■□□□□ 0.83
SCAMP2-205ENST00000564529 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
SCAMP2-205ENST00000564529 RUNDC1Q96C34 613 aa20.23■□□□□ 0.83
SCAMP2-205ENST00000564529 ADCY9O60503 1353 aa20.22■□□□□ 0.83
SCAMP2-205ENST00000564529 HSP90AB1P08238 724 aaKnown RBP20.22■□□□□ 0.83
SCAMP2-205ENST00000564529 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
SCAMP2-205ENST00000564529 SMIM5Q71RC9 77 aa20.22■□□□□ 0.83
SCAMP2-205ENST00000564529 ZNF526Q8TF50 670 aaPredicted RBP20.22■□□□□ 0.83
SCAMP2-205ENST00000564529 TAF1LQ8IZX4 1826 aa20.22■□□□□ 0.83
SCAMP2-205ENST00000564529 AK7Q96M32 723 aa20.21■□□□□ 0.83
SCAMP2-205ENST00000564529 HTATSF1O43719 755 aaKnown RBP20.2■□□□□ 0.82
SCAMP2-205ENST00000564529 SMARCC1Q92922 1105 aaPredicted RBP20.2■□□□□ 0.82
SCAMP2-205ENST00000564529 DCAF5Q96JK2 942 aa20.2■□□□□ 0.82
SCAMP2-205ENST00000564529 WWC3Q9ULE0 1092 aa20.2■□□□□ 0.82
SCAMP2-205ENST00000564529 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
SCAMP2-205ENST00000564529 PHF14O94880 888 aa20.19■□□□□ 0.82
SCAMP2-205ENST00000564529 NEFMP07197 916 aa20.19■□□□□ 0.82
SCAMP2-205ENST00000564529 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
SCAMP2-205ENST00000564529 C1orf141Q5JVX7 400 aa20.19■□□□□ 0.82
SCAMP2-205ENST00000564529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
SCAMP2-205ENST00000564529 HSPA6P17066 643 aa20.18■□□□□ 0.82
SCAMP2-205ENST00000564529 NFE2L2Q16236 605 aa20.18■□□□□ 0.82
SCAMP2-205ENST00000564529 PIGBQ92521 554 aa20.18■□□□□ 0.82
SCAMP2-205ENST00000564529 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
SCAMP2-205ENST00000564529 GNAT3A8MTJ3 354 aa20.17■□□□□ 0.82
SCAMP2-205ENST00000564529 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
SCAMP2-205ENST00000564529 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
SCAMP2-205ENST00000564529 MAPK8IP3Q9UPT6 1336 aa20.16■□□□□ 0.82
SCAMP2-205ENST00000564529 ITGB4P16144 1822 aa20.15■□□□□ 0.82
SCAMP2-205ENST00000564529 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
SCAMP2-205ENST00000564529 KDM6AO15550 1401 aaPredicted RBP20.14■□□□□ 0.81
SCAMP2-205ENST00000564529 CEMIPQ8WUJ3 1361 aa20.14■□□□□ 0.81
SCAMP2-205ENST00000564529 RNMTO43148 476 aaKnown RBP20.14■□□□□ 0.81
SCAMP2-205ENST00000564529 SSFA2P28290 1259 aa20.14■□□□□ 0.81
SCAMP2-205ENST00000564529 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.81
SCAMP2-205ENST00000564529 LINC00116Q8NCU8 138 aa20.14■□□□□ 0.81
SCAMP2-205ENST00000564529 IL17REQ8NFR9 667 aa20.14■□□□□ 0.81
SCAMP2-205ENST00000564529 LOC102724428A0A0B4J2F2 783 aa20.13■□□□□ 0.81
SCAMP2-205ENST00000564529 SIK1P57059 783 aa20.13■□□□□ 0.81
SCAMP2-205ENST00000564529 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
SCAMP2-205ENST00000564529 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
SCAMP2-205ENST00000564529 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
SCAMP2-205ENST00000564529 APAF1O14727 1248 aa20.11■□□□□ 0.81
SCAMP2-205ENST00000564529 KIF3CO14782 793 aa20.11■□□□□ 0.81
SCAMP2-205ENST00000564529 RIPK4P57078 832 aa20.11■□□□□ 0.81
SCAMP2-205ENST00000564529 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
SCAMP2-205ENST00000564529 ITPK1Q13572 414 aa20.1■□□□□ 0.81
SCAMP2-205ENST00000564529 ASAP1Q9ULH1 1129 aa20.1■□□□□ 0.81
SCAMP2-205ENST00000564529 GNPATO15228 680 aa20.09■□□□□ 0.81
SCAMP2-205ENST00000564529 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
SCAMP2-205ENST00000564529 TMOD3Q9NYL9 352 aa20.09■□□□□ 0.81
SCAMP2-205ENST00000564529 TRIM35Q9UPQ4 493 aa20.09■□□□□ 0.81
SCAMP2-205ENST00000564529 LMOD3Q0VAK6 560 aa20.08■□□□□ 0.81
SCAMP2-205ENST00000564529 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
SCAMP2-205ENST00000564529 SLC52A2Q9HAB3 445 aa20.08■□□□□ 0.81
SCAMP2-205ENST00000564529 MRC1P22897 1456 aa20.07■□□□□ 0.8
SCAMP2-205ENST00000564529 MMP10P09238 476 aa20.07■□□□□ 0.8
SCAMP2-205ENST00000564529 ATP6V1AP38606 617 aa20.07■□□□□ 0.8
SCAMP2-205ENST00000564529 CABP4P57796 275 aa20.06■□□□□ 0.8
SCAMP2-205ENST00000564529 NFATC2IPQ8NCF5 419 aa20.06■□□□□ 0.8
SCAMP2-205ENST00000564529 SCN11AQ9UI33 1791 aa20.06■□□□□ 0.8
SCAMP2-205ENST00000564529 MCM10Q7L590 875 aa20.05■□□□□ 0.8
SCAMP2-205ENST00000564529 ATG3Q9NT62 314 aa20.05■□□□□ 0.8
SCAMP2-205ENST00000564529 RRP7AQ9Y3A4 280 aaKnown RBP20.04■□□□□ 0.8
SCAMP2-205ENST00000564529 CICQ96RK0 1608 aaPredicted RBP20.04■□□□□ 0.8
SCAMP2-205ENST00000564529 PXDNLA1KZ92 1463 aa20.04■□□□□ 0.8
SCAMP2-205ENST00000564529 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms