RNA–Protein interactions for RNA: ENST00000564512.1

VAC14-205, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-205ENST00000564512 RGPD4Q7Z3J3 1758 aa24.09■■□□□ 1.45
VAC14-205ENST00000564512 YTHDC1Q96MU7 727 aaKnown RBP24.09■■□□□ 1.45
VAC14-205ENST00000564512 SLC52A2Q9HAB3 445 aa24.09■■□□□ 1.45
VAC14-205ENST00000564512 LAMB4A4D0S4 1761 aa24.08■■□□□ 1.45
VAC14-205ENST00000564512 ZNF853P0CG23 659 aa24.07■■□□□ 1.44
VAC14-205ENST00000564512 C5P01031 1676 aa24.06■■□□□ 1.44
VAC14-205ENST00000564512 TEFQ10587 303 aa24.06■■□□□ 1.44
VAC14-205ENST00000564512 IFT57Q9NWB7 429 aa24.06■■□□□ 1.44
VAC14-205ENST00000564512 BABAM1Q9NWV8 329 aa24.06■■□□□ 1.44
VAC14-205ENST00000564512 KCPQ6ZWJ8 1503 aa24.05■■□□□ 1.44
VAC14-205ENST00000564512 GOLGA2Q08379 1002 aa24.05■■□□□ 1.44
VAC14-205ENST00000564512 CFAP44Q96MT7 982 aa24.04■■□□□ 1.44
VAC14-205ENST00000564512 GNAI1P63096 354 aa24.03■■□□□ 1.44
VAC14-205ENST00000564512 SPINK5Q9NQ38 1064 aaPredicted RBP24.03■■□□□ 1.44
VAC14-205ENST00000564512 EP400Q96L91 3159 aa24.03■■□□□ 1.44
VAC14-205ENST00000564512 TJP1Q07157 1748 aa24.02■■□□□ 1.44
VAC14-205ENST00000564512 CHL1O00533 1208 aa24.02■■□□□ 1.44
VAC14-205ENST00000564512 TAF7Q15545 349 aaPredicted RBP24.02■■□□□ 1.44
VAC14-205ENST00000564512 FAM196AQ6ZSG2 479 aa24.02■■□□□ 1.44
VAC14-205ENST00000564512 TRMT2AQ8IZ69 625 aaKnown RBP24.02■■□□□ 1.44
VAC14-205ENST00000564512 E9PSI1 815 aa24.01■■□□□ 1.43
VAC14-205ENST00000564512 CABP4P57796 275 aa24.01■■□□□ 1.43
VAC14-205ENST00000564512 SLFN5Q08AF3 891 aa24.01■■□□□ 1.43
VAC14-205ENST00000564512 FAM182BQ5T319 152 aa24.01■■□□□ 1.43
VAC14-205ENST00000564512 TMOD3Q9NYL9 352 aa24.01■■□□□ 1.43
VAC14-205ENST00000564512 NFATC2IPQ8NCF5 419 aa24■■□□□ 1.43
VAC14-205ENST00000564512 COL5A3P25940 1745 aaPredicted RBP24■■□□□ 1.43
VAC14-205ENST00000564512 TAF1LQ8IZX4 1826 aa23.99■■□□□ 1.43
VAC14-205ENST00000564512 CDCA7LQ96GN5 454 aa23.99■■□□□ 1.43
VAC14-205ENST00000564512 FANCIQ9NVI1 1328 aa23.99■■□□□ 1.43
VAC14-205ENST00000564512 PRIM1P49642 420 aaKnown RBP23.98■■□□□ 1.43
VAC14-205ENST00000564512 PIGBQ92521 554 aa23.98■■□□□ 1.43
VAC14-205ENST00000564512 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
VAC14-205ENST00000564512 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
VAC14-205ENST00000564512 MBIPQ9NS73 344 aa23.98■■□□□ 1.43
VAC14-205ENST00000564512 HEG1Q9ULI3 1381 aa23.96■■□□□ 1.43
VAC14-205ENST00000564512 BTBD11A6QL63 1104 aa23.96■■□□□ 1.43
VAC14-205ENST00000564512 DUSP27Q5VZP5 1158 aa23.96■■□□□ 1.43
VAC14-205ENST00000564512 TSPYL4Q9UJ04 414 aa23.96■■□□□ 1.43
VAC14-205ENST00000564512 CACNA1FO60840 1977 aa23.96■■□□□ 1.43
VAC14-205ENST00000564512 KCNQ2O43526 872 aa23.95■■□□□ 1.42
VAC14-205ENST00000564512 RREB1Q92766 1687 aa23.95■■□□□ 1.42
VAC14-205ENST00000564512 ZNF790Q6PG37 636 aa23.94■■□□□ 1.42
VAC14-205ENST00000564512 BCL11BQ9C0K0 894 aaPredicted RBP23.94■■□□□ 1.42
VAC14-205ENST00000564512 TSR2Q969E8 191 aaKnown RBP23.93■■□□□ 1.42
VAC14-205ENST00000564512 SYTL4Q96C24 671 aaPredicted RBP23.92■■□□□ 1.42
VAC14-205ENST00000564512 ATG3Q9NT62 314 aa23.92■■□□□ 1.42
VAC14-205ENST00000564512 MIS18AQ9NYP9 233 aa23.92■■□□□ 1.42
VAC14-205ENST00000564512 LAS1LQ9Y4W2 734 aaKnown RBP23.92■■□□□ 1.42
VAC14-205ENST00000564512 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
VAC14-205ENST00000564512 KCNQ3O43525 872 aa23.9■■□□□ 1.42
VAC14-205ENST00000564512 EIF4A1P60842 406 aaKnown RBP23.9■■□□□ 1.42
VAC14-205ENST00000564512 SLC39A6Q13433 755 aa23.9■■□□□ 1.42
VAC14-205ENST00000564512 PALLDQ8WX93 1383 aa23.9■■□□□ 1.42
VAC14-205ENST00000564512 ASAP1Q9ULH1 1129 aa23.89■■□□□ 1.41
VAC14-205ENST00000564512 SOS1Q07889 1333 aaPredicted RBP23.88■■□□□ 1.41
VAC14-205ENST00000564512 TTC5Q8N0Z6 440 aa23.88■■□□□ 1.41
VAC14-205ENST00000564512 SMARCC1Q92922 1105 aaPredicted RBP23.88■■□□□ 1.41
VAC14-205ENST00000564512 TRIM37O94972 964 aa23.87■■□□□ 1.41
VAC14-205ENST00000564512 ZNF496Q96IT1 587 aaPredicted RBP23.86■■□□□ 1.41
VAC14-205ENST00000564512 HOXB7P09629 217 aa23.85■■□□□ 1.41
VAC14-205ENST00000564512 EXOSC9Q06265 439 aaKnown RBP23.85■■□□□ 1.41
VAC14-205ENST00000564512 FMNL2Q96PY5 1086 aa23.85■■□□□ 1.41
VAC14-205ENST00000564512 NUP188Q5SRE5 1749 aa23.84■■□□□ 1.41
VAC14-205ENST00000564512 VSIG10Q8N0Z9 540 aa23.84■■□□□ 1.41
VAC14-205ENST00000564512 MYH14Q7Z406 1995 aaKnown RBP23.83■■□□□ 1.41
VAC14-205ENST00000564512 CT47B1P0C2W7 299 aaPredicted RBP23.83■■□□□ 1.41
VAC14-205ENST00000564512 KRT24Q2M2I5 525 aa23.83■■□□□ 1.41
VAC14-205ENST00000564512 C8orf58Q8NAV2 365 aa23.83■■□□□ 1.41
VAC14-205ENST00000564512 C4BP0C0L5 1744 aa23.81■■□□□ 1.4
VAC14-205ENST00000564512 GIGYF1O75420 1035 aaPredicted RBP23.81■■□□□ 1.4
VAC14-205ENST00000564512 SLC4A9Q96Q91 983 aa23.81■■□□□ 1.4
VAC14-205ENST00000564512 TWISTNBQ3B726 338 aaPredicted RBP23.8■■□□□ 1.4
VAC14-205ENST00000564512 TSPYL6Q8N831 410 aa23.8■■□□□ 1.4
VAC14-205ENST00000564512 TUBGCP6Q96RT7 1819 aa23.8■■□□□ 1.4
VAC14-205ENST00000564512 LOC102724428A0A0B4J2F2 783 aa23.79■■□□□ 1.4
VAC14-205ENST00000564512 PLSCR1O15162 318 aa23.79■■□□□ 1.4
VAC14-205ENST00000564512 SNRPA1P09661 255 aaKnown RBP23.79■■□□□ 1.4
VAC14-205ENST00000564512 SIK1P57059 783 aa23.79■■□□□ 1.4
VAC14-205ENST00000564512 UBR3Q6ZT12 1888 aa23.79■■□□□ 1.4
VAC14-205ENST00000564512 QSER1Q2KHR3 1735 aa23.79■■□□□ 1.4
VAC14-205ENST00000564512 PTCD1O75127 700 aaKnown RBP23.78■■□□□ 1.4
VAC14-205ENST00000564512 VAMP4O75379 141 aa23.78■■□□□ 1.4
VAC14-205ENST00000564512 ZNF428Q96B54 188 aa23.78■■□□□ 1.4
VAC14-205ENST00000564512 N4BP2Q86UW6 1770 aaPredicted RBP23.76■■□□□ 1.39
VAC14-205ENST00000564512 PRAMEF22A3QJZ6 481 aa23.75■■□□□ 1.39
VAC14-205ENST00000564512 CCDC125Q86Z20 511 aa23.75■■□□□ 1.39
VAC14-205ENST00000564512 RBM42Q9BTD8 480 aaKnown RBP23.75■■□□□ 1.39
VAC14-205ENST00000564512 C4AP0C0L4 1744 aa23.74■■□□□ 1.39
VAC14-205ENST00000564512 APBA3O96018 575 aa23.74■■□□□ 1.39
VAC14-205ENST00000564512 TEX13AQ9BXU3 409 aaPredicted RBP23.74■■□□□ 1.39
VAC14-205ENST00000564512 ITPK1Q13572 414 aa23.73■■□□□ 1.39
VAC14-205ENST00000564512 SLC27A3Q5K4L6 730 aa23.73■■□□□ 1.39
VAC14-205ENST00000564512 DNAJC10Q8IXB1 793 aa23.73■■□□□ 1.39
VAC14-205ENST00000564512 ERBB4Q15303 1308 aa23.73■■□□□ 1.39
VAC14-205ENST00000564512 BCORQ6W2J9 1755 aa23.73■■□□□ 1.39
VAC14-205ENST00000564512 ELL2O00472 640 aaPredicted RBP23.72■■□□□ 1.39
VAC14-205ENST00000564512 CHMP4AQ9BY43 222 aa23.72■■□□□ 1.39
VAC14-205ENST00000564512 ATP6V1AP38606 617 aa23.71■■□□□ 1.39
VAC14-205ENST00000564512 ALDH1L2Q3SY69 923 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms