RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 ARHGAP31Q2M1Z3 1444 aa8.15□□□□□ -1.1
TUBGCP4-209ENST00000564511 AXIN1O15169 862 aa8.15□□□□□ -1.1
TUBGCP4-209ENST00000564511 RXRBP28702 533 aa8.15□□□□□ -1.1
TUBGCP4-209ENST00000564511 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
TUBGCP4-209ENST00000564511 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
TUBGCP4-209ENST00000564511 PRR7Q8TB68 274 aa8.15□□□□□ -1.1
TUBGCP4-209ENST00000564511 PCDHB15Q9Y5E8 787 aa8.15□□□□□ -1.1
TUBGCP4-209ENST00000564511 MROH1Q8NDA8 1641 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 PRDM15P57071 1507 aaPredicted RBP8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 SPATA31A6Q5VVP1 1343 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 CCNYL3P0C7X3 344 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 GJA5P36382 358 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 MTMR2Q13614 643 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 CTC1Q2NKJ3 1217 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 RSBN1LQ6PCB5 846 aaPredicted RBP8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 SLC24A3Q9HC58 644 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 RRP7BPQ9NSQ0 103 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 EVA1BQ9NVM1 165 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 CEP152O94986 1710 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 PIK3C2BO00750 1634 aa8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 EIF2AK4Q9P2K8 1649 aaKnown RBP8.14□□□□□ -1.11
TUBGCP4-209ENST00000564511 KANK1Q14678 1352 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 PHLPP1O60346 1717 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 SPDYE5A6NIY4 337 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 NUTM2BA6NNL0 878 aaPredicted RBP8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 NUTM2EB1AL46 878 aaPredicted RBP8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 SPTLC1O15269 473 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 PDE4DQ08499 809 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 PTPRNQ16849 979 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 NUTM2AQ8IVF1 878 aaPredicted RBP8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 TET3O43151 1660 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 MAST1Q9Y2H9 1570 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 EFCAB6Q5THR3 1501 aa8.13□□□□□ -1.11
TUBGCP4-209ENST00000564511 KIF15Q9NS87 1388 aa8.12□□□□□ -1.11
TUBGCP4-209ENST00000564511 LRP6O75581 1613 aa8.12□□□□□ -1.11
TUBGCP4-209ENST00000564511 SIAH2O43255 324 aa8.12□□□□□ -1.11
TUBGCP4-209ENST00000564511 DUOX2Q9NRD8 1548 aa8.12□□□□□ -1.11
TUBGCP4-209ENST00000564511 NKTRP30414 1462 aaKnown RBP8.12□□□□□ -1.11
TUBGCP4-209ENST00000564511 PPP1R15AO75807 674 aaPredicted RBP8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 ATF3P18847 181 aa8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 SH3BP2P78314 561 aa8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 KCNH2Q12809 1159 aa8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 DESI1Q6ICB0 168 aa8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 HPS1Q92902 700 aa8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 GMPR2Q9P2T1 348 aaKnown RBP8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 MYOM3Q5VTT5 1437 aa8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 FGD6Q6ZV73 1430 aa8.11□□□□□ -1.11
TUBGCP4-209ENST00000564511 HRCP23327 699 aa8.1□□□□□ -1.11
TUBGCP4-209ENST00000564511 KANK4Q5T7N3 995 aaPredicted RBP8.1□□□□□ -1.11
TUBGCP4-209ENST00000564511 RIC3Q7Z5B4 369 aa8.1□□□□□ -1.11
TUBGCP4-209ENST00000564511 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
TUBGCP4-209ENST00000564511 C19orf44Q9H6X5 657 aa8.1□□□□□ -1.11
TUBGCP4-209ENST00000564511 SLC52A1Q9NWF4 448 aa8.1□□□□□ -1.11
TUBGCP4-209ENST00000564511 COL16A1Q07092 1604 aaPredicted RBP8.1□□□□□ -1.11
TUBGCP4-209ENST00000564511 AFF2P51816 1311 aa8.09□□□□□ -1.11
TUBGCP4-209ENST00000564511 CFAP99D6REC4 459 aa8.09□□□□□ -1.11
TUBGCP4-209ENST00000564511 YY1P25490 414 aa8.09□□□□□ -1.11
TUBGCP4-209ENST00000564511 NUTM2DQ5VT03 806 aaPredicted RBP8.09□□□□□ -1.11
TUBGCP4-209ENST00000564511 BAP1Q92560 729 aa8.09□□□□□ -1.11
TUBGCP4-209ENST00000564511 ERBINQ96RT1 1412 aa8.09□□□□□ -1.11
TUBGCP4-209ENST00000564511 ALDH1A1P00352 501 aa8.08□□□□□ -1.12
TUBGCP4-209ENST00000564511 LYPD8Q6UX82 237 aa8.08□□□□□ -1.12
TUBGCP4-209ENST00000564511 EHBP1Q8NDI1 1231 aa8.08□□□□□ -1.12
TUBGCP4-209ENST00000564511 CABLES1Q8TDN4 633 aa8.08□□□□□ -1.12
TUBGCP4-209ENST00000564511 QTRT2Q9H974 415 aaKnown RBP8.08□□□□□ -1.12
TUBGCP4-209ENST00000564511 CHIC2Q9UKJ5 165 aa8.08□□□□□ -1.12
TUBGCP4-209ENST00000564511 TBX22Q9Y458 520 aa8.08□□□□□ -1.12
TUBGCP4-209ENST00000564511 NWD1Q149M9 1564 aa8.08□□□□□ -1.12
TUBGCP4-209ENST00000564511 NCOA3Q9Y6Q9 1424 aa8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 RBM6P78332 1123 aaKnown RBP8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 MYSM1Q5VVJ2 828 aa8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 BRINP3Q76B58 766 aa8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 C8orf37Q96NL8 207 aa8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 ZBTB3Q9H5J0 574 aa8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 LIMD1Q9UGP4 676 aa8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 KDM5AP29375 1690 aaKnown RBP8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 PLEKHG1Q9ULL1 1385 aa8.07□□□□□ -1.12
TUBGCP4-209ENST00000564511 CDK12Q9NYV4 1490 aaPredicted RBP8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 ABCC5O15440 1437 aa8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 NOS1P29475 1434 aa8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 C11orf95C9JLR9 678 aaPredicted RBP8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 CSPP1Q1MSJ5 1256 aa8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 PRPF38BQ5VTL8 546 aaKnown RBP8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 LRRC59Q96AG4 307 aaKnown RBP8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 ATP13A2Q9NQ11 1180 aa8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 ADGRB3O60242 1522 aa8.06□□□□□ -1.12
TUBGCP4-209ENST00000564511 SETBP1Q9Y6X0 1596 aa8.05□□□□□ -1.12
TUBGCP4-209ENST00000564511 RIMS2Q9UQ26 1411 aa8.05□□□□□ -1.12
TUBGCP4-209ENST00000564511 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.05□□□□□ -1.12
TUBGCP4-209ENST00000564511 NGLY1Q96IV0 654 aa8.05□□□□□ -1.12
TUBGCP4-209ENST00000564511 ZFYVE9O95405 1425 aa8.04□□□□□ -1.12
TUBGCP4-209ENST00000564511 LMTK2Q8IWU2 1503 aa8.04□□□□□ -1.12
TUBGCP4-209ENST00000564511 AHDC1Q5TGY3 1603 aaPredicted RBP8.04□□□□□ -1.12
TUBGCP4-209ENST00000564511 CTHP32929 405 aa8.04□□□□□ -1.12
TUBGCP4-209ENST00000564511 QPCTQ16769 361 aa8.04□□□□□ -1.12
TUBGCP4-209ENST00000564511 ZNF511Q8NB15 262 aa8.04□□□□□ -1.12
TUBGCP4-209ENST00000564511 AMOTL2Q9Y2J4 779 aa8.04□□□□□ -1.12
TUBGCP4-209ENST00000564511 ANKRD30AQ9BXX3 1397 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms