RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 KDM6AO15550 1401 aaPredicted RBP24.45■■□□□ 1.51
SPNS1-206ENST00000564476 CHL1O00533 1208 aa24.45■■□□□ 1.5
SPNS1-206ENST00000564476 CABP4P57796 275 aa24.45■■□□□ 1.5
SPNS1-206ENST00000564476 KRT27Q7Z3Y8 459 aa24.45■■□□□ 1.5
SPNS1-206ENST00000564476 SIPA1L3O60292 1781 aaPredicted RBP24.44■■□□□ 1.5
SPNS1-206ENST00000564476 NFATC2IPQ8NCF5 419 aa24.42■■□□□ 1.5
SPNS1-206ENST00000564476 CDCA7LQ96GN5 454 aa24.42■■□□□ 1.5
SPNS1-206ENST00000564476 SPINK5Q9NQ38 1064 aaPredicted RBP24.41■■□□□ 1.5
SPNS1-206ENST00000564476 LAS1LQ9Y4W2 734 aaKnown RBP24.41■■□□□ 1.5
SPNS1-206ENST00000564476 MRC1P22897 1456 aa24.4■■□□□ 1.5
SPNS1-206ENST00000564476 FAM196AQ6ZSG2 479 aa24.4■■□□□ 1.5
SPNS1-206ENST00000564476 KAT6BQ8WYB5 2073 aa24.39■■□□□ 1.5
SPNS1-206ENST00000564476 BTBD11A6QL63 1104 aa24.39■■□□□ 1.49
SPNS1-206ENST00000564476 DUSP27Q5VZP5 1158 aa24.39■■□□□ 1.49
SPNS1-206ENST00000564476 TMOD3Q9NYL9 352 aa24.39■■□□□ 1.49
SPNS1-206ENST00000564476 TSPYL4Q9UJ04 414 aa24.39■■□□□ 1.49
SPNS1-206ENST00000564476 ITGB4P16144 1822 aa24.39■■□□□ 1.49
SPNS1-206ENST00000564476 TOGARAM1Q9Y4F4 1720 aa24.38■■□□□ 1.49
SPNS1-206ENST00000564476 PRIM1P49642 420 aaKnown RBP24.37■■□□□ 1.49
SPNS1-206ENST00000564476 MBIPQ9NS73 344 aa24.37■■□□□ 1.49
SPNS1-206ENST00000564476 FANCIQ9NVI1 1328 aa24.35■■□□□ 1.49
SPNS1-206ENST00000564476 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
SPNS1-206ENST00000564476 KDM3BQ7LBC6 1761 aa24.34■■□□□ 1.49
SPNS1-206ENST00000564476 CT47B1P0C2W7 299 aaPredicted RBP24.34■■□□□ 1.49
SPNS1-206ENST00000564476 ZNF790Q6PG37 636 aa24.34■■□□□ 1.49
SPNS1-206ENST00000564476 DEFB132Q7Z7B7 95 aa24.34■■□□□ 1.49
SPNS1-206ENST00000564476 PIGBQ92521 554 aa24.34■■□□□ 1.49
SPNS1-206ENST00000564476 TNS1Q9HBL0 1735 aaKnown RBP24.34■■□□□ 1.49
SPNS1-206ENST00000564476 DOT1LQ8TEK3 1739 aa24.33■■□□□ 1.49
SPNS1-206ENST00000564476 TSR2Q969E8 191 aaKnown RBP24.33■■□□□ 1.49
SPNS1-206ENST00000564476 MIS18AQ9NYP9 233 aa24.33■■□□□ 1.49
SPNS1-206ENST00000564476 SOS1Q07889 1333 aaPredicted RBP24.33■■□□□ 1.48
SPNS1-206ENST00000564476 FAM182BQ5T319 152 aa24.32■■□□□ 1.48
SPNS1-206ENST00000564476 TTC5Q8N0Z6 440 aa24.32■■□□□ 1.48
SPNS1-206ENST00000564476 SYTL4Q96C24 671 aaPredicted RBP24.32■■□□□ 1.48
SPNS1-206ENST00000564476 CHMP4AQ9BY43 222 aa24.32■■□□□ 1.48
SPNS1-206ENST00000564476 SF3B2Q13435 895 aaKnown RBP24.31■■□□□ 1.48
SPNS1-206ENST00000564476 ACSBG1Q96GR2 724 aa24.31■■□□□ 1.48
SPNS1-206ENST00000564476 SBF2Q86WG5 1849 aa24.31■■□□□ 1.48
SPNS1-206ENST00000564476 EIF4A1P60842 406 aaKnown RBP24.3■■□□□ 1.48
SPNS1-206ENST00000564476 SMARCC1Q92922 1105 aaPredicted RBP24.3■■□□□ 1.48
SPNS1-206ENST00000564476 ZNF428Q96B54 188 aa24.29■■□□□ 1.48
SPNS1-206ENST00000564476 BCL11BQ9C0K0 894 aaPredicted RBP24.29■■□□□ 1.48
SPNS1-206ENST00000564476 HOXB7P09629 217 aa24.28■■□□□ 1.48
SPNS1-206ENST00000564476 EXOSC9Q06265 439 aaKnown RBP24.28■■□□□ 1.48
SPNS1-206ENST00000564476 FMNL2Q96PY5 1086 aa24.27■■□□□ 1.48
SPNS1-206ENST00000564476 ATG3Q9NT62 314 aa24.27■■□□□ 1.48
SPNS1-206ENST00000564476 PAPPAQ13219 1627 aa24.27■■□□□ 1.48
SPNS1-206ENST00000564476 KCNQ2O43526 872 aa24.26■■□□□ 1.47
SPNS1-206ENST00000564476 SLC39A6Q13433 755 aa24.26■■□□□ 1.47
SPNS1-206ENST00000564476 VSIG10Q8N0Z9 540 aa24.25■■□□□ 1.47
SPNS1-206ENST00000564476 HEG1Q9ULI3 1381 aa24.25■■□□□ 1.47
SPNS1-206ENST00000564476 NHSQ6T4R5 1651 aa24.24■■□□□ 1.47
SPNS1-206ENST00000564476 UBR2Q8IWV8 1755 aa24.24■■□□□ 1.47
SPNS1-206ENST00000564476 KCNQ3O43525 872 aa24.24■■□□□ 1.47
SPNS1-206ENST00000564476 ASAP1Q9ULH1 1129 aa24.24■■□□□ 1.47
SPNS1-206ENST00000564476 SNRPA1P09661 255 aaKnown RBP24.23■■□□□ 1.47
SPNS1-206ENST00000564476 BAG6P46379 1132 aa24.23■■□□□ 1.47
SPNS1-206ENST00000564476 TWISTNBQ3B726 338 aaPredicted RBP24.23■■□□□ 1.47
SPNS1-206ENST00000564476 C8orf58Q8NAV2 365 aa24.23■■□□□ 1.47
SPNS1-206ENST00000564476 VAMP4O75379 141 aa24.22■■□□□ 1.47
SPNS1-206ENST00000564476 GIGYF1O75420 1035 aaPredicted RBP24.22■■□□□ 1.47
SPNS1-206ENST00000564476 ZNF496Q96IT1 587 aaPredicted RBP24.22■■□□□ 1.47
SPNS1-206ENST00000564476 TEX13AQ9BXU3 409 aaPredicted RBP24.22■■□□□ 1.47
SPNS1-206ENST00000564476 HMGB2P26583 209 aaKnown RBP24.21■■□□□ 1.47
SPNS1-206ENST00000564476 TSPYL6Q8N831 410 aa24.19■■□□□ 1.46
SPNS1-206ENST00000564476 ELL2O00472 640 aaPredicted RBP24.18■■□□□ 1.46
SPNS1-206ENST00000564476 PTCD1O75127 700 aaKnown RBP24.18■■□□□ 1.46
SPNS1-206ENST00000564476 TRIM37O94972 964 aa24.18■■□□□ 1.46
SPNS1-206ENST00000564476 BTAF1O14981 1849 aa24.18■■□□□ 1.46
SPNS1-206ENST00000564476 EN1Q05925 392 aaPredicted RBP24.17■■□□□ 1.46
SPNS1-206ENST00000564476 ALDH1L2Q3SY69 923 aa24.17■■□□□ 1.46
SPNS1-206ENST00000564476 RCAN3Q9UKA8 241 aa24.17■■□□□ 1.46
SPNS1-206ENST00000564476 PALLDQ8WX93 1383 aa24.16■■□□□ 1.46
SPNS1-206ENST00000564476 KCPQ6ZWJ8 1503 aa24.16■■□□□ 1.46
SPNS1-206ENST00000564476 KRT24Q2M2I5 525 aa24.16■■□□□ 1.46
SPNS1-206ENST00000564476 CCDC30Q5VVM6 783 aa24.16■■□□□ 1.46
SPNS1-206ENST00000564476 RBM42Q9BTD8 480 aaKnown RBP24.16■■□□□ 1.46
SPNS1-206ENST00000564476 CACNA1FO60840 1977 aa24.16■■□□□ 1.46
SPNS1-206ENST00000564476 PLSCR1O15162 318 aa24.15■■□□□ 1.46
SPNS1-206ENST00000564476 LOC102724428A0A0B4J2F2 783 aa24.14■■□□□ 1.45
SPNS1-206ENST00000564476 RARSP54136 660 aaKnown RBP24.14■■□□□ 1.45
SPNS1-206ENST00000564476 SIK1P57059 783 aa24.14■■□□□ 1.45
SPNS1-206ENST00000564476 PTF1AQ7RTS3 328 aa24.14■■□□□ 1.45
SPNS1-206ENST00000564476 RREB1Q92766 1687 aa24.14■■□□□ 1.45
SPNS1-206ENST00000564476 STARD3NLO95772 234 aa24.13■■□□□ 1.45
SPNS1-206ENST00000564476 ZNF831Q5JPB2 1677 aa24.12■■□□□ 1.45
SPNS1-206ENST00000564476 BRPF1P55201 1214 aaPredicted RBP24.12■■□□□ 1.45
SPNS1-206ENST00000564476 HDGFL1Q5TGJ6 251 aa24.12■■□□□ 1.45
SPNS1-206ENST00000564476 ERBB4Q15303 1308 aa24.11■■□□□ 1.45
SPNS1-206ENST00000564476 STK31Q9BXU1 1019 aa24.11■■□□□ 1.45
SPNS1-206ENST00000564476 USP16Q9Y5T5 823 aa24.11■■□□□ 1.45
SPNS1-206ENST00000564476 C5P01031 1676 aa24.11■■□□□ 1.45
SPNS1-206ENST00000564476 ATP6V1AP38606 617 aa24.1■■□□□ 1.45
SPNS1-206ENST00000564476 SLC27A3Q5K4L6 730 aa24.1■■□□□ 1.45
SPNS1-206ENST00000564476 DBF4Q9UBU7 674 aaPredicted RBP24.1■■□□□ 1.45
SPNS1-206ENST00000564476 LAMB4A4D0S4 1761 aa24.1■■□□□ 1.45
SPNS1-206ENST00000564476 NUP188Q5SRE5 1749 aa24.1■■□□□ 1.45
SPNS1-206ENST00000564476 CICQ96RK0 1608 aaPredicted RBP24.1■■□□□ 1.45
SPNS1-206ENST00000564476 APBA3O96018 575 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms