RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 TNS2Q63HR2 1409 aa11.75□□□□□ -0.53
PKM-212ENST00000564440 COL24A1Q17RW2 1714 aa11.75□□□□□ -0.53
PKM-212ENST00000564440 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
PKM-212ENST00000564440 MPRIPQ6WCQ1 1025 aa11.75□□□□□ -0.53
PKM-212ENST00000564440 CDCA7Q9BWT1 371 aaPredicted RBP11.75□□□□□ -0.53
PKM-212ENST00000564440 LY75O60449 1722 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 MBIPQ9NS73 344 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 NLRP2Q9NX02 1062 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 ERBB3P21860 1342 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 SPATA31A1Q5TZJ5 1347 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 TOGARAM1Q9Y4F4 1720 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 RGS12O14924 1447 aa11.74□□□□□ -0.53
PKM-212ENST00000564440 RARSP54136 660 aaKnown RBP11.73□□□□□ -0.53
PKM-212ENST00000564440 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
PKM-212ENST00000564440 CENPQQ7L2Z9 268 aaPredicted RBP11.73□□□□□ -0.53
PKM-212ENST00000564440 AFF2P51816 1311 aa11.73□□□□□ -0.53
PKM-212ENST00000564440 FCHSD2O94868 740 aa11.73□□□□□ -0.53
PKM-212ENST00000564440 CARD10Q9BWT7 1032 aa11.73□□□□□ -0.53
PKM-212ENST00000564440 TRPC5Q9UL62 973 aaPredicted RBP11.73□□□□□ -0.53
PKM-212ENST00000564440 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
PKM-212ENST00000564440 KCNQ3O43525 872 aa11.73□□□□□ -0.53
PKM-212ENST00000564440 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
PKM-212ENST00000564440 NFE2L2Q16236 605 aa11.72□□□□□ -0.53
PKM-212ENST00000564440 NOB1Q9ULX3 412 aaKnown RBP11.72□□□□□ -0.53
PKM-212ENST00000564440 ITGB4P16144 1822 aa11.71□□□□□ -0.53
PKM-212ENST00000564440 IGSF1Q8N6C5 1336 aa11.71□□□□□ -0.53
PKM-212ENST00000564440 KDM2BQ8NHM5 1336 aa11.71□□□□□ -0.53
PKM-212ENST00000564440 NUTM2BA6NNL0 878 aaPredicted RBP11.71□□□□□ -0.53
PKM-212ENST00000564440 NUTM2EB1AL46 878 aaPredicted RBP11.71□□□□□ -0.53
PKM-212ENST00000564440 NUTM2AQ8IVF1 878 aaPredicted RBP11.71□□□□□ -0.53
PKM-212ENST00000564440 ADAMTS2O95450 1211 aa11.71□□□□□ -0.54
PKM-212ENST00000564440 PRAMEF22A3QJZ6 481 aa11.7□□□□□ -0.54
PKM-212ENST00000564440 APBB1O00213 710 aa11.7□□□□□ -0.54
PKM-212ENST00000564440 FRAT2O75474 233 aaPredicted RBP11.7□□□□□ -0.54
PKM-212ENST00000564440 EIF2S2P20042 333 aaKnown RBP11.7□□□□□ -0.54
PKM-212ENST00000564440 RBM6P78332 1123 aaKnown RBP11.7□□□□□ -0.54
PKM-212ENST00000564440 ITPRIPQ8IWB1 547 aa11.7□□□□□ -0.54
PKM-212ENST00000564440 IGHDP01880 384 aa11.7□□□□□ -0.54
PKM-212ENST00000564440 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
PKM-212ENST00000564440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.7□□□□□ -0.54
PKM-212ENST00000564440 DLG5Q8TDM6 1919 aa11.69□□□□□ -0.54
PKM-212ENST00000564440 F6X3S4 739 aa11.69□□□□□ -0.54
PKM-212ENST00000564440 C8orf34Q49A92 452 aa11.69□□□□□ -0.54
PKM-212ENST00000564440 ANKRD24Q8TF21 1146 aa11.69□□□□□ -0.54
PKM-212ENST00000564440 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
PKM-212ENST00000564440 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
PKM-212ENST00000564440 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
PKM-212ENST00000564440 NGEFQ8N5V2 710 aa11.68□□□□□ -0.54
PKM-212ENST00000564440 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
PKM-212ENST00000564440 TRIM27P14373 513 aa11.68□□□□□ -0.54
PKM-212ENST00000564440 GJD4Q96KN9 370 aaPredicted RBP11.68□□□□□ -0.54
PKM-212ENST00000564440 SLC4A10Q6U841 1118 aa11.68□□□□□ -0.54
PKM-212ENST00000564440 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
PKM-212ENST00000564440 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
PKM-212ENST00000564440 G2E3Q7L622 706 aa11.67□□□□□ -0.54
PKM-212ENST00000564440 PHF23Q9BUL5 403 aaPredicted RBP11.67□□□□□ -0.54
PKM-212ENST00000564440 MYH16Q9H6N6 1097 aa11.67□□□□□ -0.54
PKM-212ENST00000564440 USP21Q9UK80 565 aa11.67□□□□□ -0.54
PKM-212ENST00000564440 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
PKM-212ENST00000564440 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
PKM-212ENST00000564440 PRDM11Q9NQV5 511 aa11.66□□□□□ -0.54
PKM-212ENST00000564440 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
PKM-212ENST00000564440 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
PKM-212ENST00000564440 TMEM57Q8N5G2 664 aa11.66□□□□□ -0.54
PKM-212ENST00000564440 MEGF6O75095 1541 aa11.66□□□□□ -0.54
PKM-212ENST00000564440 C5P01031 1676 aa11.66□□□□□ -0.54
PKM-212ENST00000564440 NUP188Q5SRE5 1749 aa11.65□□□□□ -0.54
PKM-212ENST00000564440 FAM43AQ8N2R8 423 aa11.65□□□□□ -0.54
PKM-212ENST00000564440 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
PKM-212ENST00000564440 COL5A3P25940 1745 aaPredicted RBP11.65□□□□□ -0.54
PKM-212ENST00000564440 BTAF1O14981 1849 aa11.65□□□□□ -0.54
PKM-212ENST00000564440 TAF1LQ8IZX4 1826 aa11.65□□□□□ -0.55
PKM-212ENST00000564440 ZNF530Q6P9A1 599 aaPredicted RBP11.65□□□□□ -0.55
PKM-212ENST00000564440 WDR63Q8IWG1 891 aa11.65□□□□□ -0.55
PKM-212ENST00000564440 POTEAQ6S8J7 498 aa11.64□□□□□ -0.55
PKM-212ENST00000564440 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
PKM-212ENST00000564440 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
PKM-212ENST00000564440 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
PKM-212ENST00000564440 VAMP4O75379 141 aa11.63□□□□□ -0.55
PKM-212ENST00000564440 FAM182BQ5T319 152 aa11.62□□□□□ -0.55
PKM-212ENST00000564440 TOM1L2Q6ZVM7 507 aa11.62□□□□□ -0.55
PKM-212ENST00000564440 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
PKM-212ENST00000564440 LAMB4A4D0S4 1761 aa11.62□□□□□ -0.55
PKM-212ENST00000564440 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
PKM-212ENST00000564440 JARID2Q92833 1246 aaPredicted RBP11.62□□□□□ -0.55
PKM-212ENST00000564440 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
PKM-212ENST00000564440 LARP1Q6PKG0 1096 aaKnown RBP11.61□□□□□ -0.55
PKM-212ENST00000564440 C8orf37Q96NL8 207 aa11.61□□□□□ -0.55
PKM-212ENST00000564440 QTRT2Q9H974 415 aaKnown RBP11.61□□□□□ -0.55
PKM-212ENST00000564440 RXRBP28702 533 aa11.6□□□□□ -0.55
PKM-212ENST00000564440 ARXQ96QS3 562 aa11.6□□□□□ -0.55
PKM-212ENST00000564440 PHAXQ9H814 394 aaKnown RBP11.6□□□□□ -0.55
PKM-212ENST00000564440 AIMP1Q12904 312 aaKnown RBP11.6□□□□□ -0.55
PKM-212ENST00000564440 DZIP1LQ8IYY4 767 aaKnown RBP11.6□□□□□ -0.55
PKM-212ENST00000564440 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
PKM-212ENST00000564440 CCDC125Q86Z20 511 aa11.6□□□□□ -0.55
PKM-212ENST00000564440 GNAT3A8MTJ3 354 aa11.59□□□□□ -0.55
PKM-212ENST00000564440 ZKSCAN2Q63HK3 967 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms