RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
NSMCE1-207ENST00000564342 QSER1Q2KHR3 1735 aa11.17□□□□□ -0.62
NSMCE1-207ENST00000564342 CNGB1Q14028 1251 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-207ENST00000564342 AEBP1Q8IUX7 1158 aa11.16□□□□□ -0.62
NSMCE1-207ENST00000564342 TUBGCP6Q96RT7 1819 aa11.16□□□□□ -0.62
NSMCE1-207ENST00000564342 VIRMAQ69YN4 1812 aaKnown RBP11.15□□□□□ -0.62
NSMCE1-207ENST00000564342 TAF1LQ8IZX4 1826 aa11.15□□□□□ -0.62
NSMCE1-207ENST00000564342 PHKG2P15735 406 aa11.15□□□□□ -0.62
NSMCE1-207ENST00000564342 IFNL2Q8IZJ0 200 aa11.15□□□□□ -0.62
NSMCE1-207ENST00000564342 LRRC4BQ9NT99 713 aa11.15□□□□□ -0.62
NSMCE1-207ENST00000564342 C5P01031 1676 aa11.14□□□□□ -0.63
NSMCE1-207ENST00000564342 SLC15A2Q16348 729 aa11.14□□□□□ -0.63
NSMCE1-207ENST00000564342 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
NSMCE1-207ENST00000564342 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
NSMCE1-207ENST00000564342 STK32BQ9NY57 414 aa11.14□□□□□ -0.63
NSMCE1-207ENST00000564342 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-207ENST00000564342 SCN11AQ9UI33 1791 aa11.13□□□□□ -0.63
NSMCE1-207ENST00000564342 POTEB2H3BUK9 544 aa11.13□□□□□ -0.63
NSMCE1-207ENST00000564342 DIAPH1O60610 1272 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-207ENST00000564342 SLC27A3Q5K4L6 730 aa11.13□□□□□ -0.63
NSMCE1-207ENST00000564342 MPRIPQ6WCQ1 1025 aa11.13□□□□□ -0.63
NSMCE1-207ENST00000564342 PDGFDQ9GZP0 370 aaPredicted RBP11.13□□□□□ -0.63
NSMCE1-207ENST00000564342 KDM6AO15550 1401 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-207ENST00000564342 ZNF827Q17R98 1081 aa11.12□□□□□ -0.63
NSMCE1-207ENST00000564342 AMOTQ4VCS5 1084 aa11.12□□□□□ -0.63
NSMCE1-207ENST00000564342 PLEKHO1Q53GL0 409 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-207ENST00000564342 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
NSMCE1-207ENST00000564342 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
NSMCE1-207ENST00000564342 KCNQ4P56696 695 aa11.11□□□□□ -0.63
NSMCE1-207ENST00000564342 ZNF530Q6P9A1 599 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-207ENST00000564342 PIGBQ92521 554 aa11.11□□□□□ -0.63
NSMCE1-207ENST00000564342 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
NSMCE1-207ENST00000564342 COL24A1Q17RW2 1714 aa11.1□□□□□ -0.63
NSMCE1-207ENST00000564342 HMOX1P09601 288 aa11.1□□□□□ -0.63
NSMCE1-207ENST00000564342 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
NSMCE1-207ENST00000564342 CCNL1Q9UK58 526 aaPredicted RBP11.1□□□□□ -0.63
NSMCE1-207ENST00000564342 ZNF831Q5JPB2 1677 aa11.1□□□□□ -0.63
NSMCE1-207ENST00000564342 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
NSMCE1-207ENST00000564342 HSP90AB1P08238 724 aaKnown RBP11.09□□□□□ -0.63
NSMCE1-207ENST00000564342 DCAF5Q96JK2 942 aa11.09□□□□□ -0.63
NSMCE1-207ENST00000564342 TMOD3Q9NYL9 352 aa11.09□□□□□ -0.63
NSMCE1-207ENST00000564342 ERVV-2B6SEH9 535 aa11.08□□□□□ -0.64
NSMCE1-207ENST00000564342 SMARCC1Q92922 1105 aaPredicted RBP11.08□□□□□ -0.64
NSMCE1-207ENST00000564342 SPON1Q9HCB6 807 aa11.08□□□□□ -0.64
NSMCE1-207ENST00000564342 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
NSMCE1-207ENST00000564342 COL5A3P25940 1745 aaPredicted RBP11.07□□□□□ -0.64
NSMCE1-207ENST00000564342 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
NSMCE1-207ENST00000564342 ZBTB7AO95365 584 aa11.07□□□□□ -0.64
NSMCE1-207ENST00000564342 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
NSMCE1-207ENST00000564342 CFAP53Q96M91 514 aa11.07□□□□□ -0.64
NSMCE1-207ENST00000564342 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
NSMCE1-207ENST00000564342 ASAP1Q9ULH1 1129 aa11.07□□□□□ -0.64
NSMCE1-207ENST00000564342 PNPLA7Q6ZV29 1317 aa11.07□□□□□ -0.64
NSMCE1-207ENST00000564342 MRC1P22897 1456 aa11.06□□□□□ -0.64
NSMCE1-207ENST00000564342 MTHFSDQ2M296 383 aaKnown RBP11.06□□□□□ -0.64
NSMCE1-207ENST00000564342 AKAP4Q5JQC9 854 aa11.06□□□□□ -0.64
NSMCE1-207ENST00000564342 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
NSMCE1-207ENST00000564342 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 ZEB1P37275 1124 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 PTGER2P43116 358 aa11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 SIK1P57059 783 aa11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 TJP1Q07157 1748 aa11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 DDX10Q13206 875 aaKnown RBP11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 MTFR1LQ9H019 292 aa11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 TFCP2L1Q9NZI6 479 aa11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-207ENST00000564342 CABP4P57796 275 aa11.04□□□□□ -0.64
NSMCE1-207ENST00000564342 SGIP1Q9BQI5 828 aa11.04□□□□□ -0.64
NSMCE1-207ENST00000564342 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
NSMCE1-207ENST00000564342 SRCAPQ6ZRS2 3230 aa11.04□□□□□ -0.64
NSMCE1-207ENST00000564342 HMGB2P26583 209 aaKnown RBP11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 ITPK1Q13572 414 aa11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 NFATC2IPQ8NCF5 419 aa11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 LINC00116Q8NCU8 138 aa11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 SLC16A10Q8TF71 515 aa11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 NUDCQ9Y266 331 aa11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 UBR2Q8IWV8 1755 aa11.03□□□□□ -0.64
NSMCE1-207ENST00000564342 RNMTO43148 476 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-207ENST00000564342 PRKAR2BP31323 418 aa11.02□□□□□ -0.65
NSMCE1-207ENST00000564342 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
NSMCE1-207ENST00000564342 COL23A1Q86Y22 540 aaPredicted RBP11.02□□□□□ -0.65
NSMCE1-207ENST00000564342 PPP1R1BQ9UD71 204 aaPredicted RBP11.02□□□□□ -0.65
NSMCE1-207ENST00000564342 MAP3K5Q99683 1374 aa11.02□□□□□ -0.65
NSMCE1-207ENST00000564342 U2AF1L5P0DN76 240 aaPredicted RBP11.01□□□□□ -0.65
NSMCE1-207ENST00000564342 U2AF1Q01081 240 aaKnown RBP eCLIP11.01□□□□□ -0.65
NSMCE1-207ENST00000564342 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
NSMCE1-207ENST00000564342 GAS2L2Q8NHY3 880 aa11.01□□□□□ -0.65
NSMCE1-207ENST00000564342 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
NSMCE1-207ENST00000564342 SLC52A2Q9HAB3 445 aa11.01□□□□□ -0.65
NSMCE1-207ENST00000564342 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
NSMCE1-207ENST00000564342 MYH14Q7Z406 1995 aaKnown RBP11.01□□□□□ -0.65
NSMCE1-207ENST00000564342 KCPQ6ZWJ8 1503 aa11□□□□□ -0.65
NSMCE1-207ENST00000564342 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
NSMCE1-207ENST00000564342 RALBP1Q15311 655 aa11□□□□□ -0.65
NSMCE1-207ENST00000564342 AK7Q96M32 723 aa11□□□□□ -0.65
NSMCE1-207ENST00000564342 C4AP0C0L4 1744 aa11□□□□□ -0.65
NSMCE1-207ENST00000564342 FCHSD2O94868 740 aa10.99□□□□□ -0.65
NSMCE1-207ENST00000564342 SMIM5Q71RC9 77 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms