RNA–Protein interactions for RNA: ENST00000564201.1

NR4A1-220, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-220ENST00000564201 TEFQ10587 303 aa15.66■□□□□ 0.1
NR4A1-220ENST00000564201 YTHDC1Q96MU7 727 aaKnown RBP15.66■□□□□ 0.1
NR4A1-220ENST00000564201 TOGARAM1Q9Y4F4 1720 aa15.65■□□□□ 0.1
NR4A1-220ENST00000564201 ERVV-2B6SEH9 535 aa15.65■□□□□ 0.1
NR4A1-220ENST00000564201 TRIM37O94972 964 aa15.65■□□□□ 0.1
NR4A1-220ENST00000564201 NFATC2IPQ8NCF5 419 aa15.65■□□□□ 0.1
NR4A1-220ENST00000564201 TMOD3Q9NYL9 352 aa15.65■□□□□ 0.1
NR4A1-220ENST00000564201 PTF1AQ7RTS3 328 aa15.64■□□□□ 0.09
NR4A1-220ENST00000564201 WWC1Q8IX03 1113 aa15.64■□□□□ 0.09
NR4A1-220ENST00000564201 SLC52A2Q9HAB3 445 aa15.64■□□□□ 0.09
NR4A1-220ENST00000564201 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
NR4A1-220ENST00000564201 ITGB4P16144 1822 aa15.64■□□□□ 0.09
NR4A1-220ENST00000564201 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
NR4A1-220ENST00000564201 CEMIPQ8WUJ3 1361 aa15.62■□□□□ 0.09
NR4A1-220ENST00000564201 BCL9O00512 1426 aa15.62■□□□□ 0.09
NR4A1-220ENST00000564201 CCDC27Q2M243 656 aa15.62■□□□□ 0.09
NR4A1-220ENST00000564201 NGEFQ8N5V2 710 aa15.62■□□□□ 0.09
NR4A1-220ENST00000564201 PIGBQ92521 554 aa15.62■□□□□ 0.09
NR4A1-220ENST00000564201 ADAMTS7Q9UKP4 1686 aa15.62■□□□□ 0.09
NR4A1-220ENST00000564201 TAF7Q15545 349 aaPredicted RBP15.61■□□□□ 0.09
NR4A1-220ENST00000564201 MIS18AQ9NYP9 233 aa15.61■□□□□ 0.09
NR4A1-220ENST00000564201 NHSQ6T4R5 1651 aa15.6■□□□□ 0.09
NR4A1-220ENST00000564201 SLC39A6Q13433 755 aa15.6■□□□□ 0.09
NR4A1-220ENST00000564201 BCL11BQ9C0K0 894 aaPredicted RBP15.6■□□□□ 0.09
NR4A1-220ENST00000564201 BTBD11A6QL63 1104 aa15.59■□□□□ 0.09
NR4A1-220ENST00000564201 CALD1Q05682 793 aaKnown RBP15.59■□□□□ 0.09
NR4A1-220ENST00000564201 MRC1P22897 1456 aa15.59■□□□□ 0.09
NR4A1-220ENST00000564201 WDR63Q8IWG1 891 aa15.58■□□□□ 0.08
NR4A1-220ENST00000564201 ASAP1Q9ULH1 1129 aa15.58■□□□□ 0.08
NR4A1-220ENST00000564201 BTAF1O14981 1849 aa15.58■□□□□ 0.08
NR4A1-220ENST00000564201 SIPA1L3O60292 1781 aaPredicted RBP15.57■□□□□ 0.08
NR4A1-220ENST00000564201 APBA3O96018 575 aa15.57■□□□□ 0.08
NR4A1-220ENST00000564201 C1QBPQ07021 282 aaKnown RBP15.57■□□□□ 0.08
NR4A1-220ENST00000564201 ATG3Q9NT62 314 aa15.57■□□□□ 0.08
NR4A1-220ENST00000564201 TSPYL4Q9UJ04 414 aa15.57■□□□□ 0.08
NR4A1-220ENST00000564201 KCNQ3O43525 872 aa15.56■□□□□ 0.08
NR4A1-220ENST00000564201 GNAI1P63096 354 aa15.56■□□□□ 0.08
NR4A1-220ENST00000564201 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
NR4A1-220ENST00000564201 SF3B2Q13435 895 aaKnown RBP15.56■□□□□ 0.08
NR4A1-220ENST00000564201 TTC5Q8N0Z6 440 aa15.56■□□□□ 0.08
NR4A1-220ENST00000564201 ZNF521Q96K83 1311 aa15.56■□□□□ 0.08
NR4A1-220ENST00000564201 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
NR4A1-220ENST00000564201 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
NR4A1-220ENST00000564201 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
NR4A1-220ENST00000564201 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
NR4A1-220ENST00000564201 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
NR4A1-220ENST00000564201 IFT57Q9NWB7 429 aa15.55■□□□□ 0.08
NR4A1-220ENST00000564201 IL16Q14005 1332 aa15.54■□□□□ 0.08
NR4A1-220ENST00000564201 ZBED9Q6R2W3 1325 aa15.54■□□□□ 0.08
NR4A1-220ENST00000564201 CHL1O00533 1208 aa15.54■□□□□ 0.08
NR4A1-220ENST00000564201 SMARCC1Q92922 1105 aaPredicted RBP15.54■□□□□ 0.08
NR4A1-220ENST00000564201 TSR2Q969E8 191 aaKnown RBP15.54■□□□□ 0.08
NR4A1-220ENST00000564201 CDCA7LQ96GN5 454 aa15.54■□□□□ 0.08
NR4A1-220ENST00000564201 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
NR4A1-220ENST00000564201 PALLDQ8WX93 1383 aa15.53■□□□□ 0.08
NR4A1-220ENST00000564201 ZNF853P0CG23 659 aa15.53■□□□□ 0.08
NR4A1-220ENST00000564201 TNS1Q9HBL0 1735 aaKnown RBP15.53■□□□□ 0.08
NR4A1-220ENST00000564201 UPF1Q92900 1129 aaKnown RBP eCLIP15.52■□□□□ 0.08
NR4A1-220ENST00000564201 BABAM1Q9NWV8 329 aa15.52■□□□□ 0.08
NR4A1-220ENST00000564201 PAPPAQ13219 1627 aa15.51■□□□□ 0.07
NR4A1-220ENST00000564201 E9PSI1 815 aa15.51■□□□□ 0.07
NR4A1-220ENST00000564201 KCNQ4P56696 695 aa15.51■□□□□ 0.07
NR4A1-220ENST00000564201 EN1Q05925 392 aaPredicted RBP15.51■□□□□ 0.07
NR4A1-220ENST00000564201 SLFN5Q08AF3 891 aa15.51■□□□□ 0.07
NR4A1-220ENST00000564201 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
NR4A1-220ENST00000564201 MYH16Q9H6N6 1097 aa15.51■□□□□ 0.07
NR4A1-220ENST00000564201 KDM3BQ7LBC6 1761 aa15.51■□□□□ 0.07
NR4A1-220ENST00000564201 FANCIQ9NVI1 1328 aa15.5■□□□□ 0.07
NR4A1-220ENST00000564201 BAG6P46379 1132 aa15.5■□□□□ 0.07
NR4A1-220ENST00000564201 EIF4A1P60842 406 aaKnown RBP15.5■□□□□ 0.07
NR4A1-220ENST00000564201 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
NR4A1-220ENST00000564201 DEFB132Q7Z7B7 95 aa15.5■□□□□ 0.07
NR4A1-220ENST00000564201 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
NR4A1-220ENST00000564201 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
NR4A1-220ENST00000564201 EP400Q96L91 3159 aa15.49■□□□□ 0.07
NR4A1-220ENST00000564201 LOC102724428A0A0B4J2F2 783 aa15.49■□□□□ 0.07
NR4A1-220ENST00000564201 ELL2O00472 640 aaPredicted RBP15.49■□□□□ 0.07
NR4A1-220ENST00000564201 PLSCR1O15162 318 aa15.49■□□□□ 0.07
NR4A1-220ENST00000564201 ATP6V1AP38606 617 aa15.49■□□□□ 0.07
NR4A1-220ENST00000564201 SIK1P57059 783 aa15.49■□□□□ 0.07
NR4A1-220ENST00000564201 CCNL1Q9UK58 526 aaPredicted RBP15.49■□□□□ 0.07
NR4A1-220ENST00000564201 KCPQ6ZWJ8 1503 aa15.48■□□□□ 0.07
NR4A1-220ENST00000564201 EZH2Q15910 746 aaKnown RBP15.48■□□□□ 0.07
NR4A1-220ENST00000564201 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
NR4A1-220ENST00000564201 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
NR4A1-220ENST00000564201 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
NR4A1-220ENST00000564201 PRAMEF22A3QJZ6 481 aa15.47■□□□□ 0.07
NR4A1-220ENST00000564201 EXOSC9Q06265 439 aaKnown RBP15.47■□□□□ 0.07
NR4A1-220ENST00000564201 TXNRD1Q16881 649 aa15.47■□□□□ 0.07
NR4A1-220ENST00000564201 HEG1Q9ULI3 1381 aa15.47■□□□□ 0.07
NR4A1-220ENST00000564201 LY75O60449 1722 aa15.46■□□□□ 0.07
NR4A1-220ENST00000564201 SNRPA1P09661 255 aaKnown RBP15.46■□□□□ 0.07
NR4A1-220ENST00000564201 DNAJC10Q8IXB1 793 aa15.46■□□□□ 0.07
NR4A1-220ENST00000564201 PROM2Q8N271 834 aa15.46■□□□□ 0.07
NR4A1-220ENST00000564201 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
NR4A1-220ENST00000564201 CAMKK2Q96RR4 588 aa15.46■□□□□ 0.07
NR4A1-220ENST00000564201 GIGYF1O75420 1035 aaPredicted RBP15.45■□□□□ 0.06
NR4A1-220ENST00000564201 ITPK1Q13572 414 aa15.45■□□□□ 0.06
NR4A1-220ENST00000564201 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
NR4A1-220ENST00000564201 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms