RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 SCN11AQ9UI33 1791 aa27.02■■□□□ 1.92
CMTM3-206ENST00000563672 ADAMTS7Q9UKP4 1686 aa27.02■■□□□ 1.92
CMTM3-206ENST00000563672 MRC1P22897 1456 aa27.01■■□□□ 1.91
CMTM3-206ENST00000563672 IL17REQ8NFR9 667 aa27.01■■□□□ 1.91
CMTM3-206ENST00000563672 LRP5O75197 1615 aa27.01■■□□□ 1.91
CMTM3-206ENST00000563672 CASZ1Q86V15 1759 aa27■■□□□ 1.91
CMTM3-206ENST00000563672 SLC4A9Q96Q91 983 aa27■■□□□ 1.91
CMTM3-206ENST00000563672 PLEKHF1Q96S99 279 aa27■■□□□ 1.91
CMTM3-206ENST00000563672 TFCP2L1Q9NZI6 479 aa27■■□□□ 1.91
CMTM3-206ENST00000563672 ATP6V1AP38606 617 aa26.99■■□□□ 1.91
CMTM3-206ENST00000563672 ITPK1Q13572 414 aa26.99■■□□□ 1.91
CMTM3-206ENST00000563672 PNPLA7Q6ZV29 1317 aa26.98■■□□□ 1.91
CMTM3-206ENST00000563672 SPON1Q9HCB6 807 aa26.98■■□□□ 1.91
CMTM3-206ENST00000563672 RBM42Q9BTD8 480 aaKnown RBP26.97■■□□□ 1.91
CMTM3-206ENST00000563672 C5P01031 1676 aa26.96■■□□□ 1.91
CMTM3-206ENST00000563672 LINC00116Q8NCU8 138 aa26.96■■□□□ 1.91
CMTM3-206ENST00000563672 PNNQ9H307 717 aaKnown RBP26.96■■□□□ 1.91
CMTM3-206ENST00000563672 CEMIPQ8WUJ3 1361 aa26.96■■□□□ 1.91
CMTM3-206ENST00000563672 ZBTB7AO95365 584 aa26.95■■□□□ 1.9
CMTM3-206ENST00000563672 PTCD1O75127 700 aaKnown RBP26.94■■□□□ 1.9
CMTM3-206ENST00000563672 TAF1LQ8IZX4 1826 aa26.94■■□□□ 1.9
CMTM3-206ENST00000563672 HTATSF1O43719 755 aaKnown RBP26.93■■□□□ 1.9
CMTM3-206ENST00000563672 NEFMP07197 916 aa26.93■■□□□ 1.9
CMTM3-206ENST00000563672 MTFR1LQ9H019 292 aa26.93■■□□□ 1.9
CMTM3-206ENST00000563672 TEFQ10587 303 aa26.92■■□□□ 1.9
CMTM3-206ENST00000563672 SLC39A6Q13433 755 aa26.92■■□□□ 1.9
CMTM3-206ENST00000563672 SLC16A10Q8TF71 515 aa26.92■■□□□ 1.9
CMTM3-206ENST00000563672 C4BP0C0L5 1744 aa26.92■■□□□ 1.9
CMTM3-206ENST00000563672 QSER1Q2KHR3 1735 aa26.92■■□□□ 1.9
CMTM3-206ENST00000563672 ZNF831Q5JPB2 1677 aa26.92■■□□□ 1.9
CMTM3-206ENST00000563672 COL23A1Q86Y22 540 aaPredicted RBP26.91■■□□□ 1.9
CMTM3-206ENST00000563672 AK7Q96M32 723 aa26.91■■□□□ 1.9
CMTM3-206ENST00000563672 RTF1Q92541 710 aaKnown RBP26.9■■□□□ 1.9
CMTM3-206ENST00000563672 ATF5Q9Y2D1 282 aaPredicted RBP26.9■■□□□ 1.9
CMTM3-206ENST00000563672 PTGER2P43116 358 aa26.89■■□□□ 1.9
CMTM3-206ENST00000563672 NFE2L2Q16236 605 aa26.89■■□□□ 1.9
CMTM3-206ENST00000563672 AMIGO3Q86WK7 504 aa26.89■■□□□ 1.9
CMTM3-206ENST00000563672 FLAD1Q8NFF5 587 aa26.89■■□□□ 1.9
CMTM3-206ENST00000563672 TUBGCP6Q96RT7 1819 aa26.88■■□□□ 1.89
CMTM3-206ENST00000563672 RC3H1Q5TC82 1133 aaKnown RBP26.88■■□□□ 1.89
CMTM3-206ENST00000563672 MCM10Q7L590 875 aa26.88■■□□□ 1.89
CMTM3-206ENST00000563672 VIRMAQ69YN4 1812 aaKnown RBP26.88■■□□□ 1.89
CMTM3-206ENST00000563672 WDR43Q15061 677 aaKnown RBP eCLIP26.87■■□□□ 1.89
CMTM3-206ENST00000563672 SGIP1Q9BQI5 828 aa26.87■■□□□ 1.89
CMTM3-206ENST00000563672 MAPK8IP3Q9UPT6 1336 aa26.87■■□□□ 1.89
CMTM3-206ENST00000563672 DCTN1Q14203 1278 aa26.86■■□□□ 1.89
CMTM3-206ENST00000563672 KCPQ6ZWJ8 1503 aa26.85■■□□□ 1.89
CMTM3-206ENST00000563672 SSFA2P28290 1259 aa26.85■■□□□ 1.89
CMTM3-206ENST00000563672 ZNF790Q6PG37 636 aa26.85■■□□□ 1.89
CMTM3-206ENST00000563672 ADAMTS8Q9UP79 889 aa26.85■■□□□ 1.89
CMTM3-206ENST00000563672 CNTNAP4Q9C0A0 1308 aa26.85■■□□□ 1.89
CMTM3-206ENST00000563672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.84■■□□□ 1.89
CMTM3-206ENST00000563672 GNPATO15228 680 aa26.84■■□□□ 1.89
CMTM3-206ENST00000563672 SMIM5Q71RC9 77 aa26.84■■□□□ 1.89
CMTM3-206ENST00000563672 MSH5O43196 834 aa26.83■■□□□ 1.89
CMTM3-206ENST00000563672 ANP32CO43423 234 aa26.83■■□□□ 1.89
CMTM3-206ENST00000563672 TTC5Q8N0Z6 440 aa26.83■■□□□ 1.89
CMTM3-206ENST00000563672 VSIG10Q8N0Z9 540 aa26.83■■□□□ 1.89
CMTM3-206ENST00000563672 SIPA1L3O60292 1781 aaPredicted RBP26.82■■□□□ 1.88
CMTM3-206ENST00000563672 BTBD11A6QL63 1104 aa26.82■■□□□ 1.88
CMTM3-206ENST00000563672 DNAJC10Q8IXB1 793 aa26.82■■□□□ 1.88
CMTM3-206ENST00000563672 CICQ96RK0 1608 aaPredicted RBP26.82■■□□□ 1.88
CMTM3-206ENST00000563672 PHF14O94880 888 aa26.81■■□□□ 1.88
CMTM3-206ENST00000563672 ZNF496Q96IT1 587 aaPredicted RBP26.81■■□□□ 1.88
CMTM3-206ENST00000563672 UBR3Q6ZT12 1888 aa26.81■■□□□ 1.88
CMTM3-206ENST00000563672 COL5A3P25940 1745 aaPredicted RBP26.8■■□□□ 1.88
CMTM3-206ENST00000563672 RPS6KA4O75676 772 aa26.8■■□□□ 1.88
CMTM3-206ENST00000563672 CRKLP46109 303 aaKnown RBP26.8■■□□□ 1.88
CMTM3-206ENST00000563672 CCDC184Q52MB2 194 aa26.8■■□□□ 1.88
CMTM3-206ENST00000563672 RUNDC1Q96C34 613 aa26.8■■□□□ 1.88
CMTM3-206ENST00000563672 PPP1R1BQ9UD71 204 aaPredicted RBP26.8■■□□□ 1.88
CMTM3-206ENST00000563672 RTCBQ9Y3I0 505 aaKnown RBP26.8■■□□□ 1.88
CMTM3-206ENST00000563672 TMPOP42166 694 aaKnown RBP26.79■■□□□ 1.88
CMTM3-206ENST00000563672 TAF7Q15545 349 aaPredicted RBP26.79■■□□□ 1.88
CMTM3-206ENST00000563672 CCDC146Q8IYE0 955 aa26.79■■□□□ 1.88
CMTM3-206ENST00000563672 TJP1Q07157 1748 aa26.79■■□□□ 1.88
CMTM3-206ENST00000563672 KCNQ3O43525 872 aa26.78■■□□□ 1.88
CMTM3-206ENST00000563672 CYP19A1P11511 503 aaPredicted RBP26.78■■□□□ 1.88
CMTM3-206ENST00000563672 RIPK4P57078 832 aa26.78■■□□□ 1.88
CMTM3-206ENST00000563672 INTS5Q6P9B9 1019 aaKnown RBP26.78■■□□□ 1.88
CMTM3-206ENST00000563672 UBR2Q8IWV8 1755 aa26.78■■□□□ 1.88
CMTM3-206ENST00000563672 HEG1Q9ULI3 1381 aa26.76■■□□□ 1.87
CMTM3-206ENST00000563672 ADRA2BP18089 450 aa26.76■■□□□ 1.87
CMTM3-206ENST00000563672 TRAPPC3LQ5T215 181 aa26.76■■□□□ 1.87
CMTM3-206ENST00000563672 FMNL2Q96PY5 1086 aa26.76■■□□□ 1.87
CMTM3-206ENST00000563672 ARXQ96QS3 562 aa26.75■■□□□ 1.87
CMTM3-206ENST00000563672 THUMPD2Q9BTF0 503 aaKnown RBP26.75■■□□□ 1.87
CMTM3-206ENST00000563672 COL24A1Q17RW2 1714 aa26.75■■□□□ 1.87
CMTM3-206ENST00000563672 MYH14Q7Z406 1995 aaKnown RBP26.75■■□□□ 1.87
CMTM3-206ENST00000563672 DLG5Q8TDM6 1919 aa26.75■■□□□ 1.87
CMTM3-206ENST00000563672 POLD1P28340 1107 aa26.74■■□□□ 1.87
CMTM3-206ENST00000563672 ARHGEF1Q92888 912 aaKnown RBP26.74■■□□□ 1.87
CMTM3-206ENST00000563672 CCDC87Q9NVE4 849 aa26.74■■□□□ 1.87
CMTM3-206ENST00000563672 MSL1Q68DK7 614 aa26.73■■□□□ 1.87
CMTM3-206ENST00000563672 TEX13AQ9BXU3 409 aaPredicted RBP26.73■■□□□ 1.87
CMTM3-206ENST00000563672 RRP7AQ9Y3A4 280 aaKnown RBP26.73■■□□□ 1.87
CMTM3-206ENST00000563672 PNISRQ8TF01 805 aaKnown RBP26.72■■□□□ 1.87
CMTM3-206ENST00000563672 STARD3NLO95772 234 aa26.71■■□□□ 1.87
CMTM3-206ENST00000563672 LMOD3Q0VAK6 560 aa26.71■■□□□ 1.87
CMTM3-206ENST00000563672 MIS18AQ9NYP9 233 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms