RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 AK7Q96M32 723 aa13.56□□□□□ -0.24
VAC14-204ENST00000563662 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
VAC14-204ENST00000563662 PNPLA7Q6ZV29 1317 aa13.55□□□□□ -0.24
VAC14-204ENST00000563662 ATP6V1AP38606 617 aa13.54□□□□□ -0.24
VAC14-204ENST00000563662 AKAP4Q5JQC9 854 aa13.54□□□□□ -0.24
VAC14-204ENST00000563662 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
VAC14-204ENST00000563662 SYT17Q9BSW7 474 aa13.54□□□□□ -0.24
VAC14-204ENST00000563662 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
VAC14-204ENST00000563662 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
VAC14-204ENST00000563662 AEBP1Q8IUX7 1158 aa13.53□□□□□ -0.24
VAC14-204ENST00000563662 FHDC1Q9C0D6 1143 aaPredicted RBP13.53□□□□□ -0.24
VAC14-204ENST00000563662 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
VAC14-204ENST00000563662 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
VAC14-204ENST00000563662 KDRP35968 1356 aa13.53□□□□□ -0.24
VAC14-204ENST00000563662 SSFA2P28290 1259 aa13.51□□□□□ -0.25
VAC14-204ENST00000563662 CNGB1Q14028 1251 aaPredicted RBP13.51□□□□□ -0.25
VAC14-204ENST00000563662 U2SURPO15042 1029 aaKnown RBP13.5□□□□□ -0.25
VAC14-204ENST00000563662 HMOX1P09601 288 aa13.5□□□□□ -0.25
VAC14-204ENST00000563662 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
VAC14-204ENST00000563662 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
VAC14-204ENST00000563662 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
VAC14-204ENST00000563662 MAP3K5Q99683 1374 aa13.49□□□□□ -0.25
VAC14-204ENST00000563662 BTAF1O14981 1849 aa13.49□□□□□ -0.25
VAC14-204ENST00000563662 SPDYE2BA6NHP3 402 aa13.49□□□□□ -0.25
VAC14-204ENST00000563662 SPDYE6P0CI01 402 aa13.49□□□□□ -0.25
VAC14-204ENST00000563662 SPDYE2Q495Y8 402 aa13.49□□□□□ -0.25
VAC14-204ENST00000563662 GAS2L2Q8NHY3 880 aa13.49□□□□□ -0.25
VAC14-204ENST00000563662 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
VAC14-204ENST00000563662 ANKRD26Q9UPS8 1709 aa13.49□□□□□ -0.25
VAC14-204ENST00000563662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
VAC14-204ENST00000563662 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
VAC14-204ENST00000563662 GNPATO15228 680 aa13.47□□□□□ -0.25
VAC14-204ENST00000563662 LINC00116Q8NCU8 138 aa13.47□□□□□ -0.25
VAC14-204ENST00000563662 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
VAC14-204ENST00000563662 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
VAC14-204ENST00000563662 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
VAC14-204ENST00000563662 PHF14O94880 888 aa13.46□□□□□ -0.25
VAC14-204ENST00000563662 YY1P25490 414 aa13.46□□□□□ -0.25
VAC14-204ENST00000563662 ITPK1Q13572 414 aa13.46□□□□□ -0.25
VAC14-204ENST00000563662 MTHFSDQ2M296 383 aaKnown RBP13.46□□□□□ -0.25
VAC14-204ENST00000563662 KLHL34Q8N239 644 aa13.46□□□□□ -0.25
VAC14-204ENST00000563662 CD2APQ9Y5K6 639 aa13.46□□□□□ -0.25
VAC14-204ENST00000563662 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.26
VAC14-204ENST00000563662 PAPPAQ13219 1627 aa13.46□□□□□ -0.26
VAC14-204ENST00000563662 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
VAC14-204ENST00000563662 PTCD1O75127 700 aaKnown RBP13.45□□□□□ -0.26
VAC14-204ENST00000563662 GPR162Q16538 588 aa13.45□□□□□ -0.26
VAC14-204ENST00000563662 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
VAC14-204ENST00000563662 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 GNAT3A8MTJ3 354 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 FCHSD2O94868 740 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 NEFMP07197 916 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 CASZ1Q86V15 1759 aa13.44□□□□□ -0.26
VAC14-204ENST00000563662 CNTNAP4Q9C0A0 1308 aa13.43□□□□□ -0.26
VAC14-204ENST00000563662 U2AF1L5P0DN76 240 aaPredicted RBP13.43□□□□□ -0.26
VAC14-204ENST00000563662 RFC4P35249 363 aa13.43□□□□□ -0.26
VAC14-204ENST00000563662 U2AF1Q01081 240 aaKnown RBP eCLIP13.43□□□□□ -0.26
VAC14-204ENST00000563662 TEFQ10587 303 aa13.43□□□□□ -0.26
VAC14-204ENST00000563662 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
VAC14-204ENST00000563662 PNNQ9H307 717 aaKnown RBP13.43□□□□□ -0.26
VAC14-204ENST00000563662 LGR6Q9HBX8 967 aa13.43□□□□□ -0.26
VAC14-204ENST00000563662 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
VAC14-204ENST00000563662 KDM6AO15550 1401 aaPredicted RBP13.42□□□□□ -0.26
VAC14-204ENST00000563662 TTC5Q8N0Z6 440 aa13.42□□□□□ -0.26
VAC14-204ENST00000563662 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
VAC14-204ENST00000563662 TEX13AQ9BXU3 409 aaPredicted RBP13.42□□□□□ -0.26
VAC14-204ENST00000563662 RTF1Q92541 710 aaKnown RBP13.41□□□□□ -0.26
VAC14-204ENST00000563662 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
VAC14-204ENST00000563662 SLC4A9Q96Q91 983 aa13.41□□□□□ -0.26
VAC14-204ENST00000563662 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
VAC14-204ENST00000563662 LY75O60449 1722 aa13.4□□□□□ -0.26
VAC14-204ENST00000563662 STARD3NLO95772 234 aa13.4□□□□□ -0.26
VAC14-204ENST00000563662 PRKAR2BP31323 418 aa13.4□□□□□ -0.26
VAC14-204ENST00000563662 HTATSF1O43719 755 aaKnown RBP13.39□□□□□ -0.27
VAC14-204ENST00000563662 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
VAC14-204ENST00000563662 RALBP1Q15311 655 aa13.39□□□□□ -0.27
VAC14-204ENST00000563662 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
VAC14-204ENST00000563662 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
VAC14-204ENST00000563662 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
VAC14-204ENST00000563662 CCDC87Q9NVE4 849 aa13.38□□□□□ -0.27
VAC14-204ENST00000563662 ZPR1O75312 459 aa13.37□□□□□ -0.27
VAC14-204ENST00000563662 MMP10P09238 476 aa13.37□□□□□ -0.27
VAC14-204ENST00000563662 SLC39A6Q13433 755 aa13.37□□□□□ -0.27
VAC14-204ENST00000563662 NPM2Q86SE8 214 aaKnown RBP13.37□□□□□ -0.27
VAC14-204ENST00000563662 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
VAC14-204ENST00000563662 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
VAC14-204ENST00000563662 A0A087WZG4 1122 aa13.36□□□□□ -0.27
VAC14-204ENST00000563662 CYP19A1P11511 503 aaPredicted RBP13.36□□□□□ -0.27
VAC14-204ENST00000563662 GYS1P13807 737 aa13.36□□□□□ -0.27
VAC14-204ENST00000563662 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
VAC14-204ENST00000563662 TGFB2P61812 414 aa13.36□□□□□ -0.27
VAC14-204ENST00000563662 INTS5Q6P9B9 1019 aaKnown RBP13.36□□□□□ -0.27
VAC14-204ENST00000563662 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
VAC14-204ENST00000563662 SMIM5Q71RC9 77 aa13.36□□□□□ -0.27
VAC14-204ENST00000563662 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
VAC14-204ENST00000563662 NLGN2Q8NFZ4 835 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms