RNA–Protein interactions for RNA: ENST00000563295.1

KIFC3-215, Transcript of kinesin family member C3, humanhuman

TSL 5

Gene KIFC3, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-215ENST00000563295 ARXQ96QS3 562 aa13.34□□□□□ -0.27
KIFC3-215ENST00000563295 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
KIFC3-215ENST00000563295 ITPK1Q13572 414 aa13.33□□□□□ -0.28
KIFC3-215ENST00000563295 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
KIFC3-215ENST00000563295 LINC00116Q8NCU8 138 aa13.33□□□□□ -0.28
KIFC3-215ENST00000563295 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
KIFC3-215ENST00000563295 C5P01031 1676 aa13.33□□□□□ -0.28
KIFC3-215ENST00000563295 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
KIFC3-215ENST00000563295 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
KIFC3-215ENST00000563295 LGR6Q9HBX8 967 aa13.32□□□□□ -0.28
KIFC3-215ENST00000563295 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
KIFC3-215ENST00000563295 SYT17Q9BSW7 474 aa13.31□□□□□ -0.28
KIFC3-215ENST00000563295 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
KIFC3-215ENST00000563295 TAF1LQ8IZX4 1826 aa13.31□□□□□ -0.28
KIFC3-215ENST00000563295 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
KIFC3-215ENST00000563295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.3□□□□□ -0.28
KIFC3-215ENST00000563295 GNPATO15228 680 aa13.3□□□□□ -0.28
KIFC3-215ENST00000563295 PTCD1O75127 700 aaKnown RBP13.3□□□□□ -0.28
KIFC3-215ENST00000563295 U2AF1L5P0DN76 240 aaPredicted RBP13.3□□□□□ -0.28
KIFC3-215ENST00000563295 SSFA2P28290 1259 aa13.3□□□□□ -0.28
KIFC3-215ENST00000563295 U2AF1Q01081 240 aaKnown RBP eCLIP13.3□□□□□ -0.28
KIFC3-215ENST00000563295 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
KIFC3-215ENST00000563295 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
KIFC3-215ENST00000563295 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
KIFC3-215ENST00000563295 FCHSD2O94868 740 aa13.29□□□□□ -0.28
KIFC3-215ENST00000563295 PHF14O94880 888 aa13.29□□□□□ -0.28
KIFC3-215ENST00000563295 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
KIFC3-215ENST00000563295 DDX10Q13206 875 aaKnown RBP13.29□□□□□ -0.28
KIFC3-215ENST00000563295 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
KIFC3-215ENST00000563295 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
KIFC3-215ENST00000563295 ZEB1P37275 1124 aaPredicted RBP13.28□□□□□ -0.28
KIFC3-215ENST00000563295 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
KIFC3-215ENST00000563295 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
KIFC3-215ENST00000563295 MAP3K5Q99683 1374 aa13.28□□□□□ -0.28
KIFC3-215ENST00000563295 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.28
KIFC3-215ENST00000563295 RALBP1Q15311 655 aa13.27□□□□□ -0.29
KIFC3-215ENST00000563295 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
KIFC3-215ENST00000563295 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
KIFC3-215ENST00000563295 ZNF831Q5JPB2 1677 aa13.26□□□□□ -0.29
KIFC3-215ENST00000563295 TRAPPC3LQ5T215 181 aa13.26□□□□□ -0.29
KIFC3-215ENST00000563295 SMIM5Q71RC9 77 aa13.26□□□□□ -0.29
KIFC3-215ENST00000563295 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
KIFC3-215ENST00000563295 CNTNAP4Q9C0A0 1308 aa13.26□□□□□ -0.29
KIFC3-215ENST00000563295 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
KIFC3-215ENST00000563295 MRC1P22897 1456 aa13.25□□□□□ -0.29
KIFC3-215ENST00000563295 RPS6KA4O75676 772 aa13.25□□□□□ -0.29
KIFC3-215ENST00000563295 ADRA2BP18089 450 aa13.25□□□□□ -0.29
KIFC3-215ENST00000563295 TEFQ10587 303 aa13.25□□□□□ -0.29
KIFC3-215ENST00000563295 SLC39A6Q13433 755 aa13.25□□□□□ -0.29
KIFC3-215ENST00000563295 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
KIFC3-215ENST00000563295 COL24A1Q17RW2 1714 aa13.25□□□□□ -0.29
KIFC3-215ENST00000563295 CRKLP46109 303 aaKnown RBP13.24□□□□□ -0.29
KIFC3-215ENST00000563295 TTC5Q8N0Z6 440 aa13.24□□□□□ -0.29
KIFC3-215ENST00000563295 NEFMP07197 916 aa13.23□□□□□ -0.29
KIFC3-215ENST00000563295 ADAMTS7Q9UKP4 1686 aa13.23□□□□□ -0.29
KIFC3-215ENST00000563295 RFC4P35249 363 aa13.22□□□□□ -0.29
KIFC3-215ENST00000563295 DNAJC10Q8IXB1 793 aa13.22□□□□□ -0.29
KIFC3-215ENST00000563295 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
KIFC3-215ENST00000563295 RTF1Q92541 710 aaKnown RBP13.22□□□□□ -0.29
KIFC3-215ENST00000563295 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
KIFC3-215ENST00000563295 GOLGB1Q14789 3259 aaKnown RBP13.22□□□□□ -0.29
KIFC3-215ENST00000563295 CEMIPQ8WUJ3 1361 aa13.21□□□□□ -0.29
KIFC3-215ENST00000563295 HTATSF1O43719 755 aaKnown RBP13.21□□□□□ -0.29
KIFC3-215ENST00000563295 INTS5Q6P9B9 1019 aaKnown RBP13.21□□□□□ -0.29
KIFC3-215ENST00000563295 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
KIFC3-215ENST00000563295 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
KIFC3-215ENST00000563295 PNNQ9H307 717 aaKnown RBP13.21□□□□□ -0.29
KIFC3-215ENST00000563295 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
KIFC3-215ENST00000563295 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.29
KIFC3-215ENST00000563295 COL5A3P25940 1745 aaPredicted RBP13.2□□□□□ -0.3
KIFC3-215ENST00000563295 STARD3NLO95772 234 aa13.2□□□□□ -0.3
KIFC3-215ENST00000563295 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
KIFC3-215ENST00000563295 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
KIFC3-215ENST00000563295 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
KIFC3-215ENST00000563295 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
KIFC3-215ENST00000563295 VIRMAQ69YN4 1812 aaKnown RBP13.19□□□□□ -0.3
KIFC3-215ENST00000563295 BTBD11A6QL63 1104 aa13.19□□□□□ -0.3
KIFC3-215ENST00000563295 MMP10P09238 476 aa13.19□□□□□ -0.3
KIFC3-215ENST00000563295 GPR162Q16538 588 aa13.19□□□□□ -0.3
KIFC3-215ENST00000563295 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
KIFC3-215ENST00000563295 TEX13AQ9BXU3 409 aaPredicted RBP13.19□□□□□ -0.3
KIFC3-215ENST00000563295 UTRNP46939 3433 aa13.19□□□□□ -0.3
KIFC3-215ENST00000563295 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
KIFC3-215ENST00000563295 CICQ96RK0 1608 aaPredicted RBP13.18□□□□□ -0.3
KIFC3-215ENST00000563295 GYS1P13807 737 aa13.18□□□□□ -0.3
KIFC3-215ENST00000563295 MCM10Q7L590 875 aa13.18□□□□□ -0.3
KIFC3-215ENST00000563295 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
KIFC3-215ENST00000563295 TJP1Q07157 1748 aa13.17□□□□□ -0.3
KIFC3-215ENST00000563295 ZPR1O75312 459 aa13.17□□□□□ -0.3
KIFC3-215ENST00000563295 YY1P25490 414 aa13.17□□□□□ -0.3
KIFC3-215ENST00000563295 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
KIFC3-215ENST00000563295 PLEKHF1Q96S99 279 aa13.17□□□□□ -0.3
KIFC3-215ENST00000563295 HEG1Q9ULI3 1381 aa13.17□□□□□ -0.3
KIFC3-215ENST00000563295 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
KIFC3-215ENST00000563295 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
KIFC3-215ENST00000563295 MAPK8IP3Q9UPT6 1336 aa13.16□□□□□ -0.3
KIFC3-215ENST00000563295 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
KIFC3-215ENST00000563295 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
KIFC3-215ENST00000563295 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
KIFC3-215ENST00000563295 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms