RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 TUBGCP6Q96RT7 1819 aa20.62■□□□□ 0.89
LPCAT4-204ENST00000563240 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
LPCAT4-204ENST00000563240 KDRP35968 1356 aa20.61■□□□□ 0.89
LPCAT4-204ENST00000563240 C5P01031 1676 aa20.61■□□□□ 0.89
LPCAT4-204ENST00000563240 YY1P25490 414 aa20.61■□□□□ 0.89
LPCAT4-204ENST00000563240 FLAD1Q8NFF5 587 aa20.61■□□□□ 0.89
LPCAT4-204ENST00000563240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.6■□□□□ 0.89
LPCAT4-204ENST00000563240 NFATC2IPQ8NCF5 419 aa20.6■□□□□ 0.89
LPCAT4-204ENST00000563240 QSER1Q2KHR3 1735 aa20.6■□□□□ 0.89
LPCAT4-204ENST00000563240 U2SURPO15042 1029 aaKnown RBP20.59■□□□□ 0.89
LPCAT4-204ENST00000563240 GNPATO15228 680 aa20.59■□□□□ 0.89
LPCAT4-204ENST00000563240 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
LPCAT4-204ENST00000563240 NPC1L1Q9UHC9 1359 aa20.59■□□□□ 0.89
LPCAT4-204ENST00000563240 C4BP0C0L5 1744 aa20.58■□□□□ 0.89
LPCAT4-204ENST00000563240 PTCD1O75127 700 aaKnown RBP20.58■□□□□ 0.89
LPCAT4-204ENST00000563240 AKAP4Q5JQC9 854 aa20.57■□□□□ 0.88
LPCAT4-204ENST00000563240 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
LPCAT4-204ENST00000563240 NLGN2Q8NFZ4 835 aa20.57■□□□□ 0.88
LPCAT4-204ENST00000563240 LGR6Q9HBX8 967 aa20.57■□□□□ 0.88
LPCAT4-204ENST00000563240 TAF1LQ8IZX4 1826 aa20.56■□□□□ 0.88
LPCAT4-204ENST00000563240 MTHFSDQ2M296 383 aaKnown RBP20.56■□□□□ 0.88
LPCAT4-204ENST00000563240 SSFA2P28290 1259 aa20.55■□□□□ 0.88
LPCAT4-204ENST00000563240 GPR162Q16538 588 aa20.55■□□□□ 0.88
LPCAT4-204ENST00000563240 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
LPCAT4-204ENST00000563240 RNMTO43148 476 aaKnown RBP20.52■□□□□ 0.88
LPCAT4-204ENST00000563240 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.88
LPCAT4-204ENST00000563240 TRAPPC3LQ5T215 181 aa20.51■□□□□ 0.87
LPCAT4-204ENST00000563240 CFAP53Q96M91 514 aa20.51■□□□□ 0.87
LPCAT4-204ENST00000563240 SLC52A2Q9HAB3 445 aa20.51■□□□□ 0.87
LPCAT4-204ENST00000563240 COL3A1P02461 1466 aaPredicted RBP20.5■□□□□ 0.87
LPCAT4-204ENST00000563240 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
LPCAT4-204ENST00000563240 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
LPCAT4-204ENST00000563240 COL24A1Q17RW2 1714 aa20.48■□□□□ 0.87
LPCAT4-204ENST00000563240 ARHGEF1Q92888 912 aaKnown RBP20.48■□□□□ 0.87
LPCAT4-204ENST00000563240 UBR3Q6ZT12 1888 aa20.47■□□□□ 0.87
LPCAT4-204ENST00000563240 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
LPCAT4-204ENST00000563240 CNTNAP4Q9C0A0 1308 aa20.47■□□□□ 0.87
LPCAT4-204ENST00000563240 RPS6KA4O75676 772 aa20.46■□□□□ 0.87
LPCAT4-204ENST00000563240 CRKLP46109 303 aaKnown RBP20.46■□□□□ 0.87
LPCAT4-204ENST00000563240 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
LPCAT4-204ENST00000563240 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
LPCAT4-204ENST00000563240 PRKAR2BP31323 418 aa20.45■□□□□ 0.86
LPCAT4-204ENST00000563240 RFC4P35249 363 aa20.45■□□□□ 0.86
LPCAT4-204ENST00000563240 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
LPCAT4-204ENST00000563240 DNAJC10Q8IXB1 793 aa20.45■□□□□ 0.86
LPCAT4-204ENST00000563240 PHACTR3Q96KR7 559 aa20.45■□□□□ 0.86
LPCAT4-204ENST00000563240 WWC3Q9ULE0 1092 aa20.45■□□□□ 0.86
LPCAT4-204ENST00000563240 CD2APQ9Y5K6 639 aa20.45■□□□□ 0.86
LPCAT4-204ENST00000563240 MMP10P09238 476 aa20.44■□□□□ 0.86
LPCAT4-204ENST00000563240 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
LPCAT4-204ENST00000563240 GNAT3A8MTJ3 354 aa20.43■□□□□ 0.86
LPCAT4-204ENST00000563240 YBX3P16989 372 aaKnown RBP eCLIP20.43■□□□□ 0.86
LPCAT4-204ENST00000563240 RSPH6AQ9H0K4 717 aa20.43■□□□□ 0.86
LPCAT4-204ENST00000563240 SCN11AQ9UI33 1791 aa20.43■□□□□ 0.86
LPCAT4-204ENST00000563240 ADRA2BP18089 450 aa20.42■□□□□ 0.86
LPCAT4-204ENST00000563240 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
LPCAT4-204ENST00000563240 INTS5Q6P9B9 1019 aaKnown RBP20.41■□□□□ 0.86
LPCAT4-204ENST00000563240 NLGN1Q8N2Q7 840 aa20.41■□□□□ 0.86
LPCAT4-204ENST00000563240 GYS1P13807 737 aa20.4■□□□□ 0.86
LPCAT4-204ENST00000563240 TEFQ10587 303 aa20.4■□□□□ 0.86
LPCAT4-204ENST00000563240 SRP68Q9UHB9 627 aaKnown RBP20.4■□□□□ 0.86
LPCAT4-204ENST00000563240 TTC5Q8N0Z6 440 aa20.39■□□□□ 0.85
LPCAT4-204ENST00000563240 CCDC87Q9NVE4 849 aa20.39■□□□□ 0.85
LPCAT4-204ENST00000563240 COL5A3P25940 1745 aaPredicted RBP20.38■□□□□ 0.85
LPCAT4-204ENST00000563240 ZNF831Q5JPB2 1677 aa20.38■□□□□ 0.85
LPCAT4-204ENST00000563240 MRC1P22897 1456 aa20.37■□□□□ 0.85
LPCAT4-204ENST00000563240 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
LPCAT4-204ENST00000563240 CYP19A1P11511 503 aaPredicted RBP20.37■□□□□ 0.85
LPCAT4-204ENST00000563240 ZNF784Q8NCA9 323 aaPredicted RBP20.37■□□□□ 0.85
LPCAT4-204ENST00000563240 MYH14Q7Z406 1995 aaKnown RBP20.37■□□□□ 0.85
LPCAT4-204ENST00000563240 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
LPCAT4-204ENST00000563240 FCHSD2O94868 740 aa20.35■□□□□ 0.85
LPCAT4-204ENST00000563240 FKBP8Q14318 412 aa20.35■□□□□ 0.85
LPCAT4-204ENST00000563240 ZNF496Q96IT1 587 aaPredicted RBP20.35■□□□□ 0.85
LPCAT4-204ENST00000563240 TJP1Q07157 1748 aa20.35■□□□□ 0.85
LPCAT4-204ENST00000563240 KCPQ6ZWJ8 1503 aa20.34■□□□□ 0.85
LPCAT4-204ENST00000563240 CANXP27824 592 aaKnown RBP20.34■□□□□ 0.85
LPCAT4-204ENST00000563240 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
LPCAT4-204ENST00000563240 ZNF790Q6PG37 636 aa20.34■□□□□ 0.85
LPCAT4-204ENST00000563240 ZBTB1Q9Y2K1 713 aa20.34■□□□□ 0.85
LPCAT4-204ENST00000563240 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.85
LPCAT4-204ENST00000563240 KCNQ3O43525 872 aa20.33■□□□□ 0.85
LPCAT4-204ENST00000563240 ZPR1O75312 459 aa20.33■□□□□ 0.85
LPCAT4-204ENST00000563240 MCM10Q7L590 875 aa20.33■□□□□ 0.85
LPCAT4-204ENST00000563240 VSIG10Q8N0Z9 540 aa20.33■□□□□ 0.85
LPCAT4-204ENST00000563240 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
LPCAT4-204ENST00000563240 A0A0G2JLW4 131 aa20.32■□□□□ 0.84
LPCAT4-204ENST00000563240 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
LPCAT4-204ENST00000563240 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
LPCAT4-204ENST00000563240 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
LPCAT4-204ENST00000563240 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
LPCAT4-204ENST00000563240 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
LPCAT4-204ENST00000563240 CICQ96RK0 1608 aaPredicted RBP20.31■□□□□ 0.84
LPCAT4-204ENST00000563240 STARD3NLO95772 234 aa20.3■□□□□ 0.84
LPCAT4-204ENST00000563240 DDR1Q08345 913 aa20.3■□□□□ 0.84
LPCAT4-204ENST00000563240 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
LPCAT4-204ENST00000563240 UTRNP46939 3433 aa20.3■□□□□ 0.84
LPCAT4-204ENST00000563240 VIRMAQ69YN4 1812 aaKnown RBP20.3■□□□□ 0.84
LPCAT4-204ENST00000563240 FMNL2Q96PY5 1086 aa20.29■□□□□ 0.84
LPCAT4-204ENST00000563240 CEMIPQ8WUJ3 1361 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms