RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 IL2RAP01589 272 aa10.37□□□□□ -0.75
LINC00557-201ENST00000563184 TRIM26Q12899 539 aaPredicted RBP10.37□□□□□ -0.75
LINC00557-201ENST00000563184 PHLDB3Q6NSJ2 640 aa10.37□□□□□ -0.75
LINC00557-201ENST00000563184 MEIOBQ8N635 442 aa10.37□□□□□ -0.75
LINC00557-201ENST00000563184 BRD1O95696 1058 aa10.36□□□□□ -0.75
LINC00557-201ENST00000563184 PTGIRP43119 386 aa10.36□□□□□ -0.75
LINC00557-201ENST00000563184 EPHA4P54764 986 aa10.36□□□□□ -0.75
LINC00557-201ENST00000563184 SERTAD1Q9UHV2 236 aa10.36□□□□□ -0.75
LINC00557-201ENST00000563184 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
LINC00557-201ENST00000563184 OCLNQ16625 522 aa10.35□□□□□ -0.75
LINC00557-201ENST00000563184 XAGE2Q96GT9 111 aa10.35□□□□□ -0.75
LINC00557-201ENST00000563184 SLC4A9Q96Q91 983 aa10.35□□□□□ -0.75
LINC00557-201ENST00000563184 A0A1W2PRU2 124 aa10.34□□□□□ -0.75
LINC00557-201ENST00000563184 SSFA2P28290 1259 aa10.34□□□□□ -0.75
LINC00557-201ENST00000563184 AEBP1Q8IUX7 1158 aa10.34□□□□□ -0.75
LINC00557-201ENST00000563184 TNS4Q8IZW8 715 aa10.34□□□□□ -0.75
LINC00557-201ENST00000563184 PRMT3O60678 531 aa10.33□□□□□ -0.76
LINC00557-201ENST00000563184 RELBQ01201 579 aa10.33□□□□□ -0.76
LINC00557-201ENST00000563184 CLN3Q13286 438 aa10.33□□□□□ -0.76
LINC00557-201ENST00000563184 ESCO1Q5FWF5 840 aa10.33□□□□□ -0.76
LINC00557-201ENST00000563184 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
LINC00557-201ENST00000563184 PRIMPOLQ96LW4 560 aa10.33□□□□□ -0.76
LINC00557-201ENST00000563184 ATP13A2Q9NQ11 1180 aa10.33□□□□□ -0.76
LINC00557-201ENST00000563184 CAPN5O15484 640 aaPredicted RBP10.32□□□□□ -0.76
LINC00557-201ENST00000563184 ATP2B4P23634 1241 aa10.32□□□□□ -0.76
LINC00557-201ENST00000563184 WEE1P30291 646 aa10.32□□□□□ -0.76
LINC00557-201ENST00000563184 CNKSR1Q969H4 720 aa10.32□□□□□ -0.76
LINC00557-201ENST00000563184 HINFPQ9BQA5 517 aa10.32□□□□□ -0.76
LINC00557-201ENST00000563184 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
LINC00557-201ENST00000563184 DACH1Q9UI36 760 aa10.32□□□□□ -0.76
LINC00557-201ENST00000563184 POTECB2RU33 542 aa10.31□□□□□ -0.76
LINC00557-201ENST00000563184 BACH1O14867 736 aa10.31□□□□□ -0.76
LINC00557-201ENST00000563184 MTFR1Q15390 333 aa10.31□□□□□ -0.76
LINC00557-201ENST00000563184 ZNF395Q9H8N7 513 aaPredicted RBP10.31□□□□□ -0.76
LINC00557-201ENST00000563184 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
LINC00557-201ENST00000563184 A6NJY4 79 aa10.3□□□□□ -0.76
LINC00557-201ENST00000563184 SMTNP53814 917 aa10.3□□□□□ -0.76
LINC00557-201ENST00000563184 FOXK2Q01167 660 aa10.3□□□□□ -0.76
LINC00557-201ENST00000563184 GAS2L2Q8NHY3 880 aa10.3□□□□□ -0.76
LINC00557-201ENST00000563184 FHDC1Q9C0D6 1143 aaPredicted RBP10.3□□□□□ -0.76
LINC00557-201ENST00000563184 CXXC1Q9P0U4 656 aaPredicted RBP10.3□□□□□ -0.76
LINC00557-201ENST00000563184 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
LINC00557-201ENST00000563184 USP3Q9Y6I4 520 aa10.3□□□□□ -0.76
LINC00557-201ENST00000563184 MEN1O00255 615 aa10.29□□□□□ -0.76
LINC00557-201ENST00000563184 C21orf2O43822 256 aa10.29□□□□□ -0.76
LINC00557-201ENST00000563184 SCNN1AP37088 669 aa10.29□□□□□ -0.76
LINC00557-201ENST00000563184 KCNA1Q09470 495 aa10.29□□□□□ -0.76
LINC00557-201ENST00000563184 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
LINC00557-201ENST00000563184 TSPAN10Q9H1Z9 355 aaPredicted RBP10.29□□□□□ -0.76
LINC00557-201ENST00000563184 CENPCQ03188 943 aa10.28□□□□□ -0.76
LINC00557-201ENST00000563184 TLR1Q15399 786 aa10.28□□□□□ -0.76
LINC00557-201ENST00000563184 B4GALNT3Q6L9W6 998 aa10.28□□□□□ -0.76
LINC00557-201ENST00000563184 LINC00528Q8N1L1 170 aa10.28□□□□□ -0.76
LINC00557-201ENST00000563184 C1orf216Q8TAB5 229 aa10.28□□□□□ -0.76
LINC00557-201ENST00000563184 KIFC2Q96AC6 838 aa10.28□□□□□ -0.76
LINC00557-201ENST00000563184 TSEN34Q9BSV6 310 aaKnown RBP10.28□□□□□ -0.76
LINC00557-201ENST00000563184 SCHIP1Q9P0W5 487 aaPredicted RBP10.28□□□□□ -0.76
LINC00557-201ENST00000563184 IQSEC3Q9UPP2 1182 aaPredicted RBP10.28□□□□□ -0.76
LINC00557-201ENST00000563184 C11orf95C9JLR9 678 aaPredicted RBP10.27□□□□□ -0.77
LINC00557-201ENST00000563184 SPINT1O43278 529 aa10.27□□□□□ -0.77
LINC00557-201ENST00000563184 TAS1R3Q7RTX0 852 aa10.27□□□□□ -0.77
LINC00557-201ENST00000563184 TRIM47Q96LD4 638 aa10.27□□□□□ -0.77
LINC00557-201ENST00000563184 IGFBP4P22692 258 aa10.26□□□□□ -0.77
LINC00557-201ENST00000563184 FKBP5Q13451 457 aaPredicted RBP10.26□□□□□ -0.77
LINC00557-201ENST00000563184 TBCELQ5QJ74 424 aa10.26□□□□□ -0.77
LINC00557-201ENST00000563184 TXNDC2Q86VQ3 553 aa10.26□□□□□ -0.77
LINC00557-201ENST00000563184 SLC9A9Q8IVB4 645 aa10.26□□□□□ -0.77
LINC00557-201ENST00000563184 ZNF295-AS1Q8N0V1 137 aa10.26□□□□□ -0.77
LINC00557-201ENST00000563184 SCG3Q8WXD2 468 aaKnown RBP10.26□□□□□ -0.77
LINC00557-201ENST00000563184 INSM2Q96T92 566 aaPredicted RBP10.26□□□□□ -0.77
LINC00557-201ENST00000563184 ATAD2Q6PL18 1390 aa10.26□□□□□ -0.77
LINC00557-201ENST00000563184 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
LINC00557-201ENST00000563184 ZNF775Q96BV0 537 aaPredicted RBP10.25□□□□□ -0.77
LINC00557-201ENST00000563184 NLRP3Q96P20 1036 aa10.25□□□□□ -0.77
LINC00557-201ENST00000563184 ZBTB7CA1YPR0 619 aa10.24□□□□□ -0.77
LINC00557-201ENST00000563184 CDK2AP1O14519 115 aa10.24□□□□□ -0.77
LINC00557-201ENST00000563184 BMP1P13497 986 aa10.24□□□□□ -0.77
LINC00557-201ENST00000563184 MRPL14Q6P1L8 145 aaKnown RBP10.24□□□□□ -0.77
LINC00557-201ENST00000563184 TRIM46Q7Z4K8 759 aa10.24□□□□□ -0.77
LINC00557-201ENST00000563184 GNEQ9Y223 722 aaKnown RBP10.24□□□□□ -0.77
LINC00557-201ENST00000563184 CTSOP43234 321 aaPredicted RBP10.23□□□□□ -0.77
LINC00557-201ENST00000563184 RNF144AP50876 292 aaPredicted RBP10.23□□□□□ -0.77
LINC00557-201ENST00000563184 C6orf118Q5T5N4 469 aa10.23□□□□□ -0.77
LINC00557-201ENST00000563184 CAPN12Q6ZSI9 719 aa10.23□□□□□ -0.77
LINC00557-201ENST00000563184 GRIP2Q9C0E4 1043 aa10.23□□□□□ -0.77
LINC00557-201ENST00000563184 IVNS1ABPQ9Y6Y0 642 aa10.23□□□□□ -0.77
LINC00557-201ENST00000563184 GPC1P35052 558 aa10.22□□□□□ -0.77
LINC00557-201ENST00000563184 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
LINC00557-201ENST00000563184 ZDHHC1Q8WTX9 485 aa10.22□□□□□ -0.77
LINC00557-201ENST00000563184 PATL2C9JE40 543 aaKnown RBP10.21□□□□□ -0.77
LINC00557-201ENST00000563184 FOXO3O43524 673 aa10.21□□□□□ -0.77
LINC00557-201ENST00000563184 PPP1R12BO60237 982 aaPredicted RBP10.21□□□□□ -0.77
LINC00557-201ENST00000563184 BMP2P12643 396 aa10.21□□□□□ -0.77
LINC00557-201ENST00000563184 ARID4AP29374 1257 aaPredicted RBP10.21□□□□□ -0.77
LINC00557-201ENST00000563184 POTEAQ6S8J7 498 aa10.21□□□□□ -0.77
LINC00557-201ENST00000563184 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.77
LINC00557-201ENST00000563184 UPP2O95045 317 aa10.2□□□□□ -0.78
LINC00557-201ENST00000563184 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
LINC00557-201ENST00000563184 MKNK1Q9BUB5 465 aa10.2□□□□□ -0.78
LINC00557-201ENST00000563184 C2orf49Q9BVC5 232 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms