RNA–Protein interactions for RNA: ENST00000563063.1

AC011840.2-201, humanhuman

BASIC

Gene AC011840.2, Length 1,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.2-201ENST00000563063 CABP4P57796 275 aa19.54■□□□□ 0.72
AC011840.2-201ENST00000563063 CALD1Q05682 793 aaKnown RBP19.54■□□□□ 0.72
AC011840.2-201ENST00000563063 NFATC2IPQ8NCF5 419 aa19.54■□□□□ 0.72
AC011840.2-201ENST00000563063 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
AC011840.2-201ENST00000563063 MIS18AQ9NYP9 233 aa19.54■□□□□ 0.72
AC011840.2-201ENST00000563063 NHSQ6T4R5 1651 aa19.54■□□□□ 0.72
AC011840.2-201ENST00000563063 BCL9O00512 1426 aa19.53■□□□□ 0.72
AC011840.2-201ENST00000563063 PRIM1P49642 420 aaKnown RBP19.53■□□□□ 0.72
AC011840.2-201ENST00000563063 KDM3BQ7LBC6 1761 aa19.53■□□□□ 0.72
AC011840.2-201ENST00000563063 IL16Q14005 1332 aa19.53■□□□□ 0.72
AC011840.2-201ENST00000563063 KCNQ2O43526 872 aa19.52■□□□□ 0.72
AC011840.2-201ENST00000563063 TSR2Q969E8 191 aaKnown RBP19.52■□□□□ 0.72
AC011840.2-201ENST00000563063 IFT57Q9NWB7 429 aa19.52■□□□□ 0.72
AC011840.2-201ENST00000563063 SUPT16HQ9Y5B9 1047 aaKnown RBP19.52■□□□□ 0.72
AC011840.2-201ENST00000563063 PAPPAQ13219 1627 aa19.52■□□□□ 0.71
AC011840.2-201ENST00000563063 ZNF853P0CG23 659 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 TAF7Q15545 349 aaPredicted RBP19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 PTF1AQ7RTS3 328 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 SLFN5Q08AF3 891 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 PIGBQ92521 554 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 CFAP44Q96MT7 982 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 MBIPQ9NS73 344 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
AC011840.2-201ENST00000563063 BTBD11A6QL63 1104 aa19.5■□□□□ 0.71
AC011840.2-201ENST00000563063 E9PSI1 815 aa19.5■□□□□ 0.71
AC011840.2-201ENST00000563063 GNAI1P63096 354 aa19.5■□□□□ 0.71
AC011840.2-201ENST00000563063 SLC39A6Q13433 755 aa19.5■□□□□ 0.71
AC011840.2-201ENST00000563063 ERICH6BQ5W0A0 696 aa19.5■□□□□ 0.71
AC011840.2-201ENST00000563063 BTAF1O14981 1849 aa19.49■□□□□ 0.71
AC011840.2-201ENST00000563063 CHL1O00533 1208 aa19.49■□□□□ 0.71
AC011840.2-201ENST00000563063 KCNQ3O43525 872 aa19.49■□□□□ 0.71
AC011840.2-201ENST00000563063 FAM196AQ6ZSG2 479 aa19.49■□□□□ 0.71
AC011840.2-201ENST00000563063 DUSP27Q5VZP5 1158 aa19.47■□□□□ 0.71
AC011840.2-201ENST00000563063 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
AC011840.2-201ENST00000563063 UBR2Q8IWV8 1755 aa19.46■□□□□ 0.71
AC011840.2-201ENST00000563063 FKBP8Q14318 412 aa19.46■□□□□ 0.71
AC011840.2-201ENST00000563063 ASAP1Q9ULH1 1129 aa19.46■□□□□ 0.71
AC011840.2-201ENST00000563063 TRMT2AQ8IZ69 625 aaKnown RBP19.46■□□□□ 0.71
AC011840.2-201ENST00000563063 KCPQ6ZWJ8 1503 aa19.45■□□□□ 0.7
AC011840.2-201ENST00000563063 TRIM37O94972 964 aa19.45■□□□□ 0.7
AC011840.2-201ENST00000563063 KRT24Q2M2I5 525 aa19.45■□□□□ 0.7
AC011840.2-201ENST00000563063 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
AC011840.2-201ENST00000563063 ZNF790Q6PG37 636 aa19.44■□□□□ 0.7
AC011840.2-201ENST00000563063 BABAM1Q9NWV8 329 aa19.44■□□□□ 0.7
AC011840.2-201ENST00000563063 TNS1Q9HBL0 1735 aaKnown RBP19.43■□□□□ 0.7
AC011840.2-201ENST00000563063 TTC5Q8N0Z6 440 aa19.42■□□□□ 0.7
AC011840.2-201ENST00000563063 C5P01031 1676 aa19.42■□□□□ 0.7
AC011840.2-201ENST00000563063 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
AC011840.2-201ENST00000563063 EXOSC9Q06265 439 aaKnown RBP19.41■□□□□ 0.7
AC011840.2-201ENST00000563063 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
AC011840.2-201ENST00000563063 BCL11BQ9C0K0 894 aaPredicted RBP19.41■□□□□ 0.7
AC011840.2-201ENST00000563063 PTCD1O75127 700 aaKnown RBP19.41■□□□□ 0.7
AC011840.2-201ENST00000563063 PALLDQ8WX93 1383 aa19.4■□□□□ 0.7
AC011840.2-201ENST00000563063 TSPYL6Q8N831 410 aa19.4■□□□□ 0.7
AC011840.2-201ENST00000563063 C8orf58Q8NAV2 365 aa19.4■□□□□ 0.7
AC011840.2-201ENST00000563063 RNF123Q5XPI4 1314 aa19.39■□□□□ 0.69
AC011840.2-201ENST00000563063 ELL2O00472 640 aaPredicted RBP19.39■□□□□ 0.69
AC011840.2-201ENST00000563063 PRAMEF22A3QJZ6 481 aa19.38■□□□□ 0.69
AC011840.2-201ENST00000563063 FMNL2Q96PY5 1086 aa19.37■□□□□ 0.69
AC011840.2-201ENST00000563063 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
AC011840.2-201ENST00000563063 HEG1Q9ULI3 1381 aa19.37■□□□□ 0.69
AC011840.2-201ENST00000563063 PELP1Q8IZL8 1130 aaKnown RBP19.36■□□□□ 0.69
AC011840.2-201ENST00000563063 SLC4A9Q96Q91 983 aa19.36■□□□□ 0.69
AC011840.2-201ENST00000563063 LY75O60449 1722 aa19.36■□□□□ 0.69
AC011840.2-201ENST00000563063 TJP1Q07157 1748 aa19.36■□□□□ 0.69
AC011840.2-201ENST00000563063 LAMB4A4D0S4 1761 aa19.36■□□□□ 0.69
AC011840.2-201ENST00000563063 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
AC011840.2-201ENST00000563063 SMARCC1Q92922 1105 aaPredicted RBP19.35■□□□□ 0.69
AC011840.2-201ENST00000563063 GIGYF1O75420 1035 aaPredicted RBP19.34■□□□□ 0.69
AC011840.2-201ENST00000563063 LOC102724428A0A0B4J2F2 783 aa19.33■□□□□ 0.68
AC011840.2-201ENST00000563063 APBA3O96018 575 aa19.33■□□□□ 0.68
AC011840.2-201ENST00000563063 KCNQ4P56696 695 aa19.33■□□□□ 0.68
AC011840.2-201ENST00000563063 SIK1P57059 783 aa19.33■□□□□ 0.68
AC011840.2-201ENST00000563063 ILDR2Q71H61 639 aa19.32■□□□□ 0.68
AC011840.2-201ENST00000563063 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
AC011840.2-201ENST00000563063 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
AC011840.2-201ENST00000563063 VAMP4O75379 141 aa19.31■□□□□ 0.68
AC011840.2-201ENST00000563063 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
AC011840.2-201ENST00000563063 DNAJC10Q8IXB1 793 aa19.31■□□□□ 0.68
AC011840.2-201ENST00000563063 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 ITPK1Q13572 414 aa19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 ZNF831Q5JPB2 1677 aa19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 COL5A3P25940 1745 aaPredicted RBP19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 ATP6V1AP38606 617 aa19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 RCAN3Q9UKA8 241 aa19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 USP16Q9Y5T5 823 aa19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 RGPD3A6NKT7 1758 aaPredicted RBP19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 RGPD4Q7Z3J3 1758 aa19.3■□□□□ 0.68
AC011840.2-201ENST00000563063 HOXB7P09629 217 aa19.29■□□□□ 0.68
AC011840.2-201ENST00000563063 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
AC011840.2-201ENST00000563063 VSIG10Q8N0Z9 540 aa19.29■□□□□ 0.68
AC011840.2-201ENST00000563063 CCNL1Q9UK58 526 aaPredicted RBP19.29■□□□□ 0.68
AC011840.2-201ENST00000563063 TAF1LQ8IZX4 1826 aa19.28■□□□□ 0.68
AC011840.2-201ENST00000563063 BCL2L13Q9BXK5 485 aa19.28■□□□□ 0.68
AC011840.2-201ENST00000563063 SOS1Q07889 1333 aaPredicted RBP19.27■□□□□ 0.68
AC011840.2-201ENST00000563063 CT47B1P0C2W7 299 aaPredicted RBP19.26■□□□□ 0.67
AC011840.2-201ENST00000563063 PIP4K2AP48426 406 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms