RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 CDK19Q9BWU1 502 aa8.25□□□□□ -1.09
CDH13-206ENST00000562601 PRR36Q9H6K5 1346 aa8.25□□□□□ -1.09
CDH13-206ENST00000562601 CENPJQ9HC77 1338 aaPredicted RBP8.25□□□□□ -1.09
CDH13-206ENST00000562601 ADGRB2O60241 1585 aa8.24□□□□□ -1.09
CDH13-206ENST00000562601 LRRC59Q96AG4 307 aaKnown RBP8.24□□□□□ -1.09
CDH13-206ENST00000562601 CARD11Q9BXL7 1154 aa8.24□□□□□ -1.09
CDH13-206ENST00000562601 SHPRHQ149N8 1683 aa8.24□□□□□ -1.09
CDH13-206ENST00000562601 MEX3CQ5U5Q3 659 aaKnown RBP8.23□□□□□ -1.09
CDH13-206ENST00000562601 ILDR2Q71H61 639 aa8.23□□□□□ -1.09
CDH13-206ENST00000562601 KRT28Q7Z3Y7 464 aa8.23□□□□□ -1.09
CDH13-206ENST00000562601 SULF1Q8IWU6 871 aa8.23□□□□□ -1.09
CDH13-206ENST00000562601 NUDT16Q96DE0 195 aaKnown RBP8.23□□□□□ -1.09
CDH13-206ENST00000562601 AK7Q96M32 723 aa8.23□□□□□ -1.09
CDH13-206ENST00000562601 PRR14Q9BWN1 585 aa8.23□□□□□ -1.09
CDH13-206ENST00000562601 DAXXQ9UER7 740 aaPredicted RBP8.23□□□□□ -1.09
CDH13-206ENST00000562601 KIF1AQ12756 1690 aa8.23□□□□□ -1.09
CDH13-206ENST00000562601 SOS2Q07890 1332 aaPredicted RBP8.23□□□□□ -1.09
CDH13-206ENST00000562601 LRP6O75581 1613 aa8.22□□□□□ -1.09
CDH13-206ENST00000562601 PXDNQ92626 1479 aa8.22□□□□□ -1.09
CDH13-206ENST00000562601 SRPK2P78362 688 aaKnown RBP8.22□□□□□ -1.09
CDH13-206ENST00000562601 PSME1Q06323 249 aa8.22□□□□□ -1.09
CDH13-206ENST00000562601 TULP4Q9NRJ4 1543 aa8.22□□□□□ -1.09
CDH13-206ENST00000562601 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
CDH13-206ENST00000562601 PNPLA6Q8IY17 1366 aa8.22□□□□□ -1.09
CDH13-206ENST00000562601 RALGAPBQ86X10 1494 aa8.21□□□□□ -1.09
CDH13-206ENST00000562601 ADAMTS2O95450 1211 aa8.21□□□□□ -1.1
CDH13-206ENST00000562601 CLCN1P35523 988 aa8.21□□□□□ -1.1
CDH13-206ENST00000562601 WBP1LQ9NX94 342 aa8.21□□□□□ -1.1
CDH13-206ENST00000562601 PLA2G2EQ9NZK7 142 aa8.21□□□□□ -1.1
CDH13-206ENST00000562601 RGS17Q9UGC6 210 aaPredicted RBP8.21□□□□□ -1.1
CDH13-206ENST00000562601 ANKARQ7Z5J8 1434 aa8.2□□□□□ -1.1
CDH13-206ENST00000562601 ITSN1Q15811 1721 aa8.2□□□□□ -1.1
CDH13-206ENST00000562601 NGDNQ8NEJ9 315 aaKnown RBP8.2□□□□□ -1.1
CDH13-206ENST00000562601 PHOX2BQ99453 314 aa8.2□□□□□ -1.1
CDH13-206ENST00000562601 SPATA31A6Q5VVP1 1343 aa8.2□□□□□ -1.1
CDH13-206ENST00000562601 GPRASP1Q5JY77 1395 aa8.2□□□□□ -1.1
CDH13-206ENST00000562601 ATP7BP35670 1465 aa8.19□□□□□ -1.1
CDH13-206ENST00000562601 KMT5BQ4FZB7 885 aa8.19□□□□□ -1.1
CDH13-206ENST00000562601 CABLES1Q8TDN4 633 aa8.19□□□□□ -1.1
CDH13-206ENST00000562601 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
CDH13-206ENST00000562601 SPATA31A3Q5VYP0 1347 aa8.19□□□□□ -1.1
CDH13-206ENST00000562601 CLSPNQ9HAW4 1339 aa8.19□□□□□ -1.1
CDH13-206ENST00000562601 EIF3AQ14152 1382 aaKnown RBP8.19□□□□□ -1.1
CDH13-206ENST00000562601 TOPAZ1Q8N9V7 1692 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 ST20-MTHFSA0A0A6YYL1 179 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 MDM2Q00987 491 aaPredicted RBP8.18□□□□□ -1.1
CDH13-206ENST00000562601 AMHR2Q16671 573 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 POTEAQ6S8J7 498 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 C8orf37Q96NL8 207 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 SLC24A3Q9HC58 644 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 CABP1Q9NZU7 370 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 ACEP12821 1306 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 EVC2Q86UK5 1308 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 PPIP5K1Q6PFW1 1433 aa8.18□□□□□ -1.1
CDH13-206ENST00000562601 TRPM3Q9HCF6 1732 aaPredicted RBP8.17□□□□□ -1.1
CDH13-206ENST00000562601 DDX11L8A8MPP1 907 aa8.17□□□□□ -1.1
CDH13-206ENST00000562601 NUTM2GQ5VZR2 741 aa8.17□□□□□ -1.1
CDH13-206ENST00000562601 RDH13Q8NBN7 331 aa8.17□□□□□ -1.1
CDH13-206ENST00000562601 TNS3Q68CZ2 1445 aa8.17□□□□□ -1.1
CDH13-206ENST00000562601 COL22A1Q8NFW1 1626 aaPredicted RBP8.17□□□□□ -1.1
CDH13-206ENST00000562601 PLEKHG3A1L390 1219 aa8.16□□□□□ -1.1
CDH13-206ENST00000562601 AFF2P51816 1311 aa8.16□□□□□ -1.1
CDH13-206ENST00000562601 TTLL12Q14166 644 aaPredicted RBP8.16□□□□□ -1.1
CDH13-206ENST00000562601 NLRP7Q8WX94 980 aa8.16□□□□□ -1.1
CDH13-206ENST00000562601 NGLY1Q96IV0 654 aa8.16□□□□□ -1.1
CDH13-206ENST00000562601 TIMELESSQ9UNS1 1208 aa8.16□□□□□ -1.1
CDH13-206ENST00000562601 MARF1Q9Y4F3 1742 aaKnown RBP8.16□□□□□ -1.1
CDH13-206ENST00000562601 ALS2Q96Q42 1657 aa8.15□□□□□ -1.1
CDH13-206ENST00000562601 SBNO1A3KN83 1393 aa8.15□□□□□ -1.1
CDH13-206ENST00000562601 TRIM66O15016 1216 aa8.15□□□□□ -1.1
CDH13-206ENST00000562601 CFHP08603 1231 aa8.15□□□□□ -1.1
CDH13-206ENST00000562601 TMC1Q8TDI8 760 aa8.15□□□□□ -1.1
CDH13-206ENST00000562601 USP47Q96K76 1375 aa8.14□□□□□ -1.11
CDH13-206ENST00000562601 TESK2Q96S53 571 aa8.14□□□□□ -1.11
CDH13-206ENST00000562601 ABCA3Q99758 1704 aa8.14□□□□□ -1.11
CDH13-206ENST00000562601 POLR3AO14802 1390 aaPredicted RBP8.13□□□□□ -1.11
CDH13-206ENST00000562601 SLC10A3P09131 477 aa8.13□□□□□ -1.11
CDH13-206ENST00000562601 APLP1P51693 650 aa8.13□□□□□ -1.11
CDH13-206ENST00000562601 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
CDH13-206ENST00000562601 ZNF772Q68DY9 489 aaPredicted RBP8.13□□□□□ -1.11
CDH13-206ENST00000562601 SLC12A5Q9H2X9 1139 aa8.13□□□□□ -1.11
CDH13-206ENST00000562601 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
CDH13-206ENST00000562601 AKAP12Q02952 1782 aa8.12□□□□□ -1.11
CDH13-206ENST00000562601 ARHGEF10O15013 1369 aa8.12□□□□□ -1.11
CDH13-206ENST00000562601 ACTN4O43707 911 aaKnown RBP8.12□□□□□ -1.11
CDH13-206ENST00000562601 ABTB2Q8N961 1025 aa8.12□□□□□ -1.11
CDH13-206ENST00000562601 TMUB1Q9BVT8 246 aa8.12□□□□□ -1.11
CDH13-206ENST00000562601 FAM217BQ9NTX9 383 aaPredicted RBP8.12□□□□□ -1.11
CDH13-206ENST00000562601 USP21Q9UK80 565 aa8.12□□□□□ -1.11
CDH13-206ENST00000562601 SBNO2Q9Y2G9 1366 aa8.11□□□□□ -1.11
CDH13-206ENST00000562601 FAM83GA6ND36 823 aa8.11□□□□□ -1.11
CDH13-206ENST00000562601 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
CDH13-206ENST00000562601 CD46P15529 392 aa8.11□□□□□ -1.11
CDH13-206ENST00000562601 PDE4DQ08499 809 aa8.11□□□□□ -1.11
CDH13-206ENST00000562601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDH13-206ENST00000562601 POLR3GLQ9BT43 218 aa8.11□□□□□ -1.11
CDH13-206ENST00000562601 PCDHB3Q9Y5E6 796 aa8.11□□□□□ -1.11
CDH13-206ENST00000562601 CRYBG1Q9Y4K1 1723 aa8.11□□□□□ -1.11
CDH13-206ENST00000562601 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
CDH13-206ENST00000562601 KTN1Q86UP2 1357 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms