RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 COL23A1Q86Y22 540 aaPredicted RBP10.21□□□□□ -0.77
CNEP1R1-204ENST00000562576 CARD10Q9BWT7 1032 aa10.21□□□□□ -0.77
CNEP1R1-204ENST00000562576 TFCP2L1Q9NZI6 479 aa10.21□□□□□ -0.77
CNEP1R1-204ENST00000562576 USP6P35125 1406 aa10.21□□□□□ -0.78
CNEP1R1-204ENST00000562576 RGPD5Q99666 1765 aa10.21□□□□□ -0.78
CNEP1R1-204ENST00000562576 TUBGCP6Q96RT7 1819 aa10.21□□□□□ -0.78
CNEP1R1-204ENST00000562576 EIF3AQ14152 1382 aaKnown RBP10.2□□□□□ -0.78
CNEP1R1-204ENST00000562576 SLC16A10Q8TF71 515 aa10.2□□□□□ -0.78
CNEP1R1-204ENST00000562576 TAOK2Q9UL54 1235 aa10.2□□□□□ -0.78
CNEP1R1-204ENST00000562576 BTAF1O14981 1849 aa10.19□□□□□ -0.78
CNEP1R1-204ENST00000562576 NHSQ6T4R5 1651 aa10.19□□□□□ -0.78
CNEP1R1-204ENST00000562576 CSB-PGBD3P0DP91 1061 aa10.19□□□□□ -0.78
CNEP1R1-204ENST00000562576 NMRK2Q9NPI5 230 aa10.19□□□□□ -0.78
CNEP1R1-204ENST00000562576 POTEB3A0JP26 581 aa10.18□□□□□ -0.78
CNEP1R1-204ENST00000562576 POTEBQ6S5H4 581 aa10.18□□□□□ -0.78
CNEP1R1-204ENST00000562576 ARHGEF25Q86VW2 580 aa10.18□□□□□ -0.78
CNEP1R1-204ENST00000562576 ARHGEF28Q8N1W1 1705 aaKnown RBP10.17□□□□□ -0.78
CNEP1R1-204ENST00000562576 JMYQ8N9B5 988 aa10.17□□□□□ -0.78
CNEP1R1-204ENST00000562576 KLRG1Q96E93 195 aa10.17□□□□□ -0.78
CNEP1R1-204ENST00000562576 CDCA7Q9BWT1 371 aaPredicted RBP10.17□□□□□ -0.78
CNEP1R1-204ENST00000562576 KRTAP3-3Q9BYR6 98 aa10.17□□□□□ -0.78
CNEP1R1-204ENST00000562576 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
CNEP1R1-204ENST00000562576 ITSN1Q15811 1721 aa10.16□□□□□ -0.78
CNEP1R1-204ENST00000562576 BRD4O60885 1362 aaPredicted RBP10.16□□□□□ -0.78
CNEP1R1-204ENST00000562576 AMIGO3Q86WK7 504 aa10.16□□□□□ -0.78
CNEP1R1-204ENST00000562576 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
CNEP1R1-204ENST00000562576 SLIT3O75094 1523 aa10.16□□□□□ -0.78
CNEP1R1-204ENST00000562576 TNS2Q63HR2 1409 aa10.16□□□□□ -0.78
CNEP1R1-204ENST00000562576 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.15□□□□□ -0.78
CNEP1R1-204ENST00000562576 ZFP91Q96JP5 570 aaPredicted RBP10.15□□□□□ -0.78
CNEP1R1-204ENST00000562576 ZSWIM6Q9HCJ5 1215 aa10.15□□□□□ -0.78
CNEP1R1-204ENST00000562576 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
CNEP1R1-204ENST00000562576 PPIP5K1Q6PFW1 1433 aa10.15□□□□□ -0.79
CNEP1R1-204ENST00000562576 ERBB3P21860 1342 aa10.14□□□□□ -0.79
CNEP1R1-204ENST00000562576 TOMM70O94826 608 aa10.14□□□□□ -0.79
CNEP1R1-204ENST00000562576 PRIM1P49642 420 aaKnown RBP10.14□□□□□ -0.79
CNEP1R1-204ENST00000562576 DCAF11Q8TEB1 546 aa10.14□□□□□ -0.79
CNEP1R1-204ENST00000562576 CPSF1Q10570 1443 aaKnown RBP10.14□□□□□ -0.79
CNEP1R1-204ENST00000562576 IGSF1Q8N6C5 1336 aa10.13□□□□□ -0.79
CNEP1R1-204ENST00000562576 KAT6BQ8WYB5 2073 aa10.13□□□□□ -0.79
CNEP1R1-204ENST00000562576 DDX54Q8TDD1 881 aaKnown RBP10.13□□□□□ -0.79
CNEP1R1-204ENST00000562576 CD2APQ9Y5K6 639 aa10.13□□□□□ -0.79
CNEP1R1-204ENST00000562576 QSER1Q2KHR3 1735 aa10.13□□□□□ -0.79
CNEP1R1-204ENST00000562576 WDR90Q96KV7 1748 aa10.13□□□□□ -0.79
CNEP1R1-204ENST00000562576 SLC27A3Q5K4L6 730 aa10.12□□□□□ -0.79
CNEP1R1-204ENST00000562576 RNF25Q96BH1 459 aaPredicted RBP10.12□□□□□ -0.79
CNEP1R1-204ENST00000562576 SYTL4Q96C24 671 aaPredicted RBP10.12□□□□□ -0.79
CNEP1R1-204ENST00000562576 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
CNEP1R1-204ENST00000562576 NSD2O96028 1365 aa10.12□□□□□ -0.79
CNEP1R1-204ENST00000562576 PIK3C2AO00443 1686 aa10.12□□□□□ -0.79
CNEP1R1-204ENST00000562576 SRPK2P78362 688 aaKnown RBP10.11□□□□□ -0.79
CNEP1R1-204ENST00000562576 TRPM1Q7Z4N2 1603 aa10.11□□□□□ -0.79
CNEP1R1-204ENST00000562576 IL2RBP14784 551 aa10.1□□□□□ -0.79
CNEP1R1-204ENST00000562576 NBPF1Q3BBV0 1214 aa10.1□□□□□ -0.79
CNEP1R1-204ENST00000562576 ABCC6O95255 1503 aa10.1□□□□□ -0.79
CNEP1R1-204ENST00000562576 CCDC7Q96M83 1385 aa10.1□□□□□ -0.79
CNEP1R1-204ENST00000562576 HSPA1AP0DMV8 641 aaKnown RBP10.09□□□□□ -0.79
CNEP1R1-204ENST00000562576 HSPA1BP0DMV9 641 aaKnown RBP10.09□□□□□ -0.79
CNEP1R1-204ENST00000562576 CCNL1Q9UK58 526 aaPredicted RBP10.09□□□□□ -0.79
CNEP1R1-204ENST00000562576 MS4A4AQ96JQ5 239 aa10.08□□□□□ -0.8
CNEP1R1-204ENST00000562576 TTC21BQ7Z4L5 1316 aa10.07□□□□□ -0.8
CNEP1R1-204ENST00000562576 NFAT5O94916 1531 aa10.07□□□□□ -0.8
CNEP1R1-204ENST00000562576 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
CNEP1R1-204ENST00000562576 RBM46Q8TBY0 533 aaKnown RBP10.06□□□□□ -0.8
CNEP1R1-204ENST00000562576 ANKRD24Q8TF21 1146 aa10.06□□□□□ -0.8
CNEP1R1-204ENST00000562576 LY75O60449 1722 aa10.05□□□□□ -0.8
CNEP1R1-204ENST00000562576 A0A0G2JLW4 131 aa10.05□□□□□ -0.8
CNEP1R1-204ENST00000562576 ARHGAP27Q6ZUM4 889 aa10.05□□□□□ -0.8
CNEP1R1-204ENST00000562576 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
CNEP1R1-204ENST00000562576 RRAGCQ9HB90 399 aa10.05□□□□□ -0.8
CNEP1R1-204ENST00000562576 PHF14O94880 888 aa10.04□□□□□ -0.8
CNEP1R1-204ENST00000562576 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-204ENST00000562576 KCNH5Q8NCM2 988 aa10.04□□□□□ -0.8
CNEP1R1-204ENST00000562576 ANKRD36BQ8N2N9 1353 aa10.03□□□□□ -0.8
CNEP1R1-204ENST00000562576 C9orf131Q5VYM1 1079 aa10.03□□□□□ -0.8
CNEP1R1-204ENST00000562576 GPR153Q6NV75 609 aa10.03□□□□□ -0.8
CNEP1R1-204ENST00000562576 ZNF687Q8N1G0 1237 aa10.03□□□□□ -0.8
CNEP1R1-204ENST00000562576 BCS1LQ9Y276 419 aa10.03□□□□□ -0.8
CNEP1R1-204ENST00000562576 KCPQ6ZWJ8 1503 aa10.02□□□□□ -0.8
CNEP1R1-204ENST00000562576 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.8
CNEP1R1-204ENST00000562576 FBLN1P23142 703 aa10.02□□□□□ -0.81
CNEP1R1-204ENST00000562576 FAM161AQ3B820 660 aa10.02□□□□□ -0.81
CNEP1R1-204ENST00000562576 NME9Q86XW9 330 aa10.02□□□□□ -0.81
CNEP1R1-204ENST00000562576 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.02□□□□□ -0.81
CNEP1R1-204ENST00000562576 CICQ96RK0 1608 aaPredicted RBP10.01□□□□□ -0.81
CNEP1R1-204ENST00000562576 FSTL1Q12841 308 aa10.01□□□□□ -0.81
CNEP1R1-204ENST00000562576 C16orf71Q8IYS4 520 aaPredicted RBP10.01□□□□□ -0.81
CNEP1R1-204ENST00000562576 PXDNLA1KZ92 1463 aa10.01□□□□□ -0.81
CNEP1R1-204ENST00000562576 TOGARAM1Q9Y4F4 1720 aa10.01□□□□□ -0.81
CNEP1R1-204ENST00000562576 USP54Q70EL1 1684 aa10□□□□□ -0.81
CNEP1R1-204ENST00000562576 QRICH2Q9H0J4 1663 aa10□□□□□ -0.81
CNEP1R1-204ENST00000562576 KIAA1551Q9HCM1 1747 aa10□□□□□ -0.81
CNEP1R1-204ENST00000562576 DPEP1P16444 411 aa10□□□□□ -0.81
CNEP1R1-204ENST00000562576 STK24Q9Y6E0 443 aa10□□□□□ -0.81
CNEP1R1-204ENST00000562576 N4BP2Q86UW6 1770 aaPredicted RBP10□□□□□ -0.81
CNEP1R1-204ENST00000562576 CENPJQ9HC77 1338 aaPredicted RBP10□□□□□ -0.81
CNEP1R1-204ENST00000562576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.99□□□□□ -0.81
CNEP1R1-204ENST00000562576 FOXN1O15353 648 aa9.99□□□□□ -0.81
CNEP1R1-204ENST00000562576 FBXO22Q8NEZ5 403 aa9.99□□□□□ -0.81
CNEP1R1-204ENST00000562576 MMP10P09238 476 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms