RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 ABCA3Q99758 1704 aa9.83□□□□□ -0.84
TCF4-213ENST00000562543 KIAA1210Q9ULL0 1709 aa9.83□□□□□ -0.84
TCF4-213ENST00000562543 ZPR1O75312 459 aa9.83□□□□□ -0.84
TCF4-213ENST00000562543 PTGDRQ13258 359 aa9.83□□□□□ -0.84
TCF4-213ENST00000562543 KLRG1Q96E93 195 aa9.83□□□□□ -0.84
TCF4-213ENST00000562543 ADCY9O60503 1353 aa9.83□□□□□ -0.84
TCF4-213ENST00000562543 NRG2O14511 850 aaPredicted RBP9.82□□□□□ -0.84
TCF4-213ENST00000562543 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
TCF4-213ENST00000562543 NRXN3Q9Y4C0 1643 aa9.82□□□□□ -0.84
TCF4-213ENST00000562543 LMTK2Q8IWU2 1503 aa9.82□□□□□ -0.84
TCF4-213ENST00000562543 FAM196AQ6ZSG2 479 aa9.81□□□□□ -0.84
TCF4-213ENST00000562543 PDZRN3Q9UPQ7 1066 aa9.81□□□□□ -0.84
TCF4-213ENST00000562543 PCDHB3Q9Y5E6 796 aa9.81□□□□□ -0.84
TCF4-213ENST00000562543 NPHP3Q7Z494 1330 aa9.81□□□□□ -0.84
TCF4-213ENST00000562543 NUTM2FA1L443 756 aa9.8□□□□□ -0.84
TCF4-213ENST00000562543 TLL1O43897 1013 aa9.8□□□□□ -0.84
TCF4-213ENST00000562543 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
TCF4-213ENST00000562543 EMID1Q96A84 441 aaPredicted RBP9.79□□□□□ -0.84
TCF4-213ENST00000562543 SLC52A1Q9NWF4 448 aa9.79□□□□□ -0.84
TCF4-213ENST00000562543 ADGRG1Q9Y653 693 aa9.79□□□□□ -0.84
TCF4-213ENST00000562543 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
TCF4-213ENST00000562543 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
TCF4-213ENST00000562543 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
TCF4-213ENST00000562543 DNAJB2P25686 324 aa9.77□□□□□ -0.85
TCF4-213ENST00000562543 GGCXP38435 758 aa9.77□□□□□ -0.85
TCF4-213ENST00000562543 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
TCF4-213ENST00000562543 DUOX2Q9NRD8 1548 aa9.77□□□□□ -0.85
TCF4-213ENST00000562543 RCCD1A6NED2 376 aa9.76□□□□□ -0.85
TCF4-213ENST00000562543 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.76□□□□□ -0.85
TCF4-213ENST00000562543 RBM46Q8TBY0 533 aaKnown RBP9.76□□□□□ -0.85
TCF4-213ENST00000562543 ARXQ96QS3 562 aa9.76□□□□□ -0.85
TCF4-213ENST00000562543 TMEM134Q9H6X4 195 aa9.76□□□□□ -0.85
TCF4-213ENST00000562543 SEMA3EO15041 775 aa9.75□□□□□ -0.85
TCF4-213ENST00000562543 MTFR1LQ9H019 292 aa9.75□□□□□ -0.85
TCF4-213ENST00000562543 SLC10A3P09131 477 aa9.74□□□□□ -0.85
TCF4-213ENST00000562543 XPCQ01831 940 aaPredicted RBP9.74□□□□□ -0.85
TCF4-213ENST00000562543 TRIM67Q6ZTA4 783 aa9.74□□□□□ -0.85
TCF4-213ENST00000562543 ZNF526Q8TF50 670 aaPredicted RBP9.74□□□□□ -0.85
TCF4-213ENST00000562543 TMUB1Q9BVT8 246 aa9.74□□□□□ -0.85
TCF4-213ENST00000562543 SPATA31A5Q5VU36 1347 aa9.74□□□□□ -0.85
TCF4-213ENST00000562543 SPATA31A7Q8IWB4 1347 aa9.74□□□□□ -0.85
TCF4-213ENST00000562543 HSPA1AP0DMV8 641 aaKnown RBP9.73□□□□□ -0.85
TCF4-213ENST00000562543 HSPA1BP0DMV9 641 aaKnown RBP9.73□□□□□ -0.85
TCF4-213ENST00000562543 SLC19A1P41440 591 aa9.73□□□□□ -0.85
TCF4-213ENST00000562543 SPATA31A3Q5VYP0 1347 aa9.73□□□□□ -0.85
TCF4-213ENST00000562543 GRIN3BO60391 1043 aa9.72□□□□□ -0.85
TCF4-213ENST00000562543 S1PR4O95977 384 aa9.72□□□□□ -0.85
TCF4-213ENST00000562543 CFHP08603 1231 aa9.72□□□□□ -0.85
TCF4-213ENST00000562543 TSPY4P0CV99 314 aa9.72□□□□□ -0.85
TCF4-213ENST00000562543 TSPY10P0CW01 314 aa9.72□□□□□ -0.85
TCF4-213ENST00000562543 HTRA3P83110 453 aa9.72□□□□□ -0.85
TCF4-213ENST00000562543 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
TCF4-213ENST00000562543 COL14A1Q05707 1796 aaKnown RBP9.72□□□□□ -0.85
TCF4-213ENST00000562543 RRBP1Q9P2E9 1410 aaKnown RBP9.72□□□□□ -0.85
TCF4-213ENST00000562543 ARHGEF28Q8N1W1 1705 aaKnown RBP9.71□□□□□ -0.85
TCF4-213ENST00000562543 ACTN4O43707 911 aaKnown RBP9.71□□□□□ -0.86
TCF4-213ENST00000562543 YBX3P16989 372 aaKnown RBP eCLIP9.71□□□□□ -0.86
TCF4-213ENST00000562543 METP08581 1390 aa9.71□□□□□ -0.86
TCF4-213ENST00000562543 ERBINQ96RT1 1412 aa9.71□□□□□ -0.86
TCF4-213ENST00000562543 COL24A1Q17RW2 1714 aa9.7□□□□□ -0.86
TCF4-213ENST00000562543 FOXO3O43524 673 aa9.7□□□□□ -0.86
TCF4-213ENST00000562543 ZNF787Q6DD87 383 aa9.7□□□□□ -0.86
TCF4-213ENST00000562543 LRPPRCP42704 1394 aaKnown RBP9.7□□□□□ -0.86
TCF4-213ENST00000562543 CDC42BPGQ6DT37 1551 aa9.7□□□□□ -0.86
TCF4-213ENST00000562543 LIAT1Q6ZQX7 453 aa9.69□□□□□ -0.86
TCF4-213ENST00000562543 SBF2Q86WG5 1849 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 EEA1Q15075 1411 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 TNS3Q68CZ2 1445 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 KANK1Q14678 1352 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 PLSCR1O15162 318 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 TOMM70O94826 608 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 FCHSD2O94868 740 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 MLLT1Q03111 559 aaPredicted RBP9.68□□□□□ -0.86
TCF4-213ENST00000562543 PUS10Q3MIT2 529 aaKnown RBP9.68□□□□□ -0.86
TCF4-213ENST00000562543 KMT5BQ4FZB7 885 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 SPRYD7Q5W111 196 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 BTG4Q9NY30 223 aa9.68□□□□□ -0.86
TCF4-213ENST00000562543 TNRC18O15417 2968 aaPredicted RBP9.67□□□□□ -0.86
TCF4-213ENST00000562543 CEP162Q5TB80 1403 aa9.67□□□□□ -0.86
TCF4-213ENST00000562543 HAP1P54257 671 aaPredicted RBP9.67□□□□□ -0.86
TCF4-213ENST00000562543 ESCO1Q5FWF5 840 aa9.67□□□□□ -0.86
TCF4-213ENST00000562543 CABLES1Q8TDN4 633 aa9.67□□□□□ -0.86
TCF4-213ENST00000562543 KIF1AQ12756 1690 aa9.67□□□□□ -0.86
TCF4-213ENST00000562543 IQGAP3Q86VI3 1631 aa9.67□□□□□ -0.86
TCF4-213ENST00000562543 TULP4Q9NRJ4 1543 aa9.66□□□□□ -0.86
TCF4-213ENST00000562543 CCDC144AA2RUR9 1427 aa9.66□□□□□ -0.86
TCF4-213ENST00000562543 PEAK1Q9H792 1746 aa9.66□□□□□ -0.86
TCF4-213ENST00000562543 FECHP22830 423 aa9.66□□□□□ -0.86
TCF4-213ENST00000562543 PLA2G2CQ5R387 149 aa9.66□□□□□ -0.86
TCF4-213ENST00000562543 RBM26Q5T8P6 1007 aaKnown RBP9.66□□□□□ -0.86
TCF4-213ENST00000562543 NLGN2Q8NFZ4 835 aa9.66□□□□□ -0.86
TCF4-213ENST00000562543 PXYLP1Q8TE99 480 aa9.66□□□□□ -0.86
TCF4-213ENST00000562543 PDE4DIPQ5VU43 2346 aa9.65□□□□□ -0.86
TCF4-213ENST00000562543 USP19O94966 1318 aa9.65□□□□□ -0.86
TCF4-213ENST00000562543 RGS19P49795 217 aa9.65□□□□□ -0.86
TCF4-213ENST00000562543 ANKLE1Q8NAG6 615 aa9.65□□□□□ -0.86
TCF4-213ENST00000562543 PRAG1Q86YV5 1406 aa9.65□□□□□ -0.87
TCF4-213ENST00000562543 TOPAZ1Q8N9V7 1692 aa9.64□□□□□ -0.87
TCF4-213ENST00000562543 SPATA31A1Q5TZJ5 1347 aa9.64□□□□□ -0.87
TCF4-213ENST00000562543 TNFRSF10AO00220 468 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms