RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
UBR1-203ENST00000562173 NR5A1Q13285 461 aa9.34□□□□□ -0.91
UBR1-203ENST00000562173 ZNF775Q96BV0 537 aaPredicted RBP9.34□□□□□ -0.91
UBR1-203ENST00000562173 KCTD15Q96SI1 283 aaPredicted RBP9.34□□□□□ -0.91
UBR1-203ENST00000562173 CDK13Q14004 1512 aaKnown RBP9.34□□□□□ -0.91
UBR1-203ENST00000562173 ZFYVE16Q7Z3T8 1539 aa9.34□□□□□ -0.91
UBR1-203ENST00000562173 C3P01024 1663 aa9.33□□□□□ -0.92
UBR1-203ENST00000562173 FSHRP23945 695 aa9.33□□□□□ -0.92
UBR1-203ENST00000562173 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
UBR1-203ENST00000562173 CEP126Q9P2H0 1117 aa9.33□□□□□ -0.92
UBR1-203ENST00000562173 ZNF777Q9ULD5 760 aaPredicted RBP9.33□□□□□ -0.92
UBR1-203ENST00000562173 LTBP4Q8N2S1 1624 aa9.33□□□□□ -0.92
UBR1-203ENST00000562173 LRRIQ1Q96JM4 1722 aa9.33□□□□□ -0.92
UBR1-203ENST00000562173 NEO1Q92859 1461 aa9.33□□□□□ -0.92
UBR1-203ENST00000562173 AKNAQ7Z591 1439 aa9.32□□□□□ -0.92
UBR1-203ENST00000562173 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
UBR1-203ENST00000562173 SLFNL1Q499Z3 407 aa9.32□□□□□ -0.92
UBR1-203ENST00000562173 GMPR2Q9P2T1 348 aaKnown RBP9.32□□□□□ -0.92
UBR1-203ENST00000562173 CHIC2Q9UKJ5 165 aa9.32□□□□□ -0.92
UBR1-203ENST00000562173 PRXQ9BXM0 1461 aa9.32□□□□□ -0.92
UBR1-203ENST00000562173 INTS6LQ5JSJ4 861 aaKnown RBP9.31□□□□□ -0.92
UBR1-203ENST00000562173 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
UBR1-203ENST00000562173 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
UBR1-203ENST00000562173 DENND4BO75064 1496 aaPredicted RBP9.31□□□□□ -0.92
UBR1-203ENST00000562173 GOLGA3Q08378 1498 aa9.31□□□□□ -0.92
UBR1-203ENST00000562173 KIF14Q15058 1648 aa9.31□□□□□ -0.92
UBR1-203ENST00000562173 ZMYM4Q5VZL5 1548 aa9.31□□□□□ -0.92
UBR1-203ENST00000562173 ARHGEF12Q9NZN5 1544 aa9.31□□□□□ -0.92
UBR1-203ENST00000562173 ARID5BQ14865 1188 aa9.3□□□□□ -0.92
UBR1-203ENST00000562173 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
UBR1-203ENST00000562173 UCN2Q96RP3 112 aa9.3□□□□□ -0.92
UBR1-203ENST00000562173 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
UBR1-203ENST00000562173 FANCAO15360 1455 aa9.29□□□□□ -0.92
UBR1-203ENST00000562173 LZTS3O60299 673 aaPredicted RBP9.29□□□□□ -0.92
UBR1-203ENST00000562173 GRM5P41594 1212 aa9.29□□□□□ -0.92
UBR1-203ENST00000562173 MAP7D1Q3KQU3 841 aa9.29□□□□□ -0.92
UBR1-203ENST00000562173 CCDC116Q8IYX3 515 aa9.29□□□□□ -0.92
UBR1-203ENST00000562173 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
UBR1-203ENST00000562173 ATP13A2Q9NQ11 1180 aa9.29□□□□□ -0.92
UBR1-203ENST00000562173 ABCA6Q8N139 1617 aa9.28□□□□□ -0.92
UBR1-203ENST00000562173 C1orf115Q9H7X2 142 aa9.28□□□□□ -0.92
UBR1-203ENST00000562173 ATP9BO43861 1147 aa9.27□□□□□ -0.93
UBR1-203ENST00000562173 GIGYF1O75420 1035 aaPredicted RBP9.27□□□□□ -0.93
UBR1-203ENST00000562173 NNTQ13423 1086 aa9.27□□□□□ -0.93
UBR1-203ENST00000562173 PLEKHM2Q8IWE5 1019 aa9.27□□□□□ -0.93
UBR1-203ENST00000562173 EMILIN1Q9Y6C2 1016 aa9.27□□□□□ -0.93
UBR1-203ENST00000562173 CCDC82Q8N4S0 544 aa9.26□□□□□ -0.93
UBR1-203ENST00000562173 PGPEP1Q9NXJ5 209 aa9.26□□□□□ -0.93
UBR1-203ENST00000562173 DOLKQ9UPQ8 538 aa9.26□□□□□ -0.93
UBR1-203ENST00000562173 EFCAB5A4FU69 1503 aa9.26□□□□□ -0.93
UBR1-203ENST00000562173 DIP2CQ9Y2E4 1556 aa9.25□□□□□ -0.93
UBR1-203ENST00000562173 SCAPERQ9BY12 1400 aa9.25□□□□□ -0.93
UBR1-203ENST00000562173 C11orf95C9JLR9 678 aaPredicted RBP9.25□□□□□ -0.93
UBR1-203ENST00000562173 PLPP7Q8NBV4 271 aa9.25□□□□□ -0.93
UBR1-203ENST00000562173 PPP1R12CQ9BZL4 782 aa9.25□□□□□ -0.93
UBR1-203ENST00000562173 MYO5CQ9NQX4 1742 aa9.25□□□□□ -0.93
UBR1-203ENST00000562173 USP17L5A8MUK1 530 aa9.24□□□□□ -0.93
UBR1-203ENST00000562173 NR3C2P08235 984 aa9.24□□□□□ -0.93
UBR1-203ENST00000562173 SIRT1Q96EB6 747 aa9.24□□□□□ -0.93
UBR1-203ENST00000562173 MAFBQ9Y5Q3 323 aaPredicted RBP9.24□□□□□ -0.93
UBR1-203ENST00000562173 POGZQ7Z3K3 1410 aa9.23□□□□□ -0.93
UBR1-203ENST00000562173 CDC42BPBQ9Y5S2 1711 aa9.23□□□□□ -0.93
UBR1-203ENST00000562173 PALM3A6NDB9 673 aaPredicted RBP9.23□□□□□ -0.93
UBR1-203ENST00000562173 ERVH48-1M5A8F1 160 aa9.23□□□□□ -0.93
UBR1-203ENST00000562173 PIK3CDO00329 1044 aa9.23□□□□□ -0.93
UBR1-203ENST00000562173 SKIP12755 728 aa9.23□□□□□ -0.93
UBR1-203ENST00000562173 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
UBR1-203ENST00000562173 PPP1R26Q5T8A7 1209 aaPredicted RBP9.23□□□□□ -0.93
UBR1-203ENST00000562173 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
UBR1-203ENST00000562173 PCDHB11Q9Y5F2 797 aa9.23□□□□□ -0.93
UBR1-203ENST00000562173 CFAP74Q9C0B2 1584 aa9.22□□□□□ -0.93
UBR1-203ENST00000562173 USP17L3A6NCW0 530 aa9.22□□□□□ -0.93
UBR1-203ENST00000562173 USP17L4A6NCW7 530 aa9.22□□□□□ -0.93
UBR1-203ENST00000562173 ERVK-9P63128 1117 aa9.22□□□□□ -0.93
UBR1-203ENST00000562173 USP17L2Q6R6M4 530 aa9.22□□□□□ -0.93
UBR1-203ENST00000562173 USP17L1Q7RTZ2 530 aa9.22□□□□□ -0.93
UBR1-203ENST00000562173 TRIM47Q96LD4 638 aa9.22□□□□□ -0.93
UBR1-203ENST00000562173 SETD1BQ9UPS6 1966 aaKnown RBP9.22□□□□□ -0.93
UBR1-203ENST00000562173 ZNF335Q9H4Z2 1342 aaPredicted RBP9.22□□□□□ -0.93
UBR1-203ENST00000562173 SUPT6HQ7KZ85 1726 aaKnown RBP9.22□□□□□ -0.93
UBR1-203ENST00000562173 MED1Q15648 1581 aaPredicted RBP9.21□□□□□ -0.93
UBR1-203ENST00000562173 CAPN5O15484 640 aaPredicted RBP9.21□□□□□ -0.94
UBR1-203ENST00000562173 BMP1P13497 986 aa9.21□□□□□ -0.94
UBR1-203ENST00000562173 EML3Q32P44 896 aa9.21□□□□□ -0.94
UBR1-203ENST00000562173 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
UBR1-203ENST00000562173 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
UBR1-203ENST00000562173 TRIM46Q7Z4K8 759 aa9.21□□□□□ -0.94
UBR1-203ENST00000562173 AFAP1Q8N556 730 aa9.21□□□□□ -0.94
UBR1-203ENST00000562173 KLF16Q9BXK1 252 aaPredicted RBP9.21□□□□□ -0.94
UBR1-203ENST00000562173 ATP10AO60312 1499 aa9.21□□□□□ -0.94
UBR1-203ENST00000562173 CAMSAP1Q5T5Y3 1602 aa9.2□□□□□ -0.94
UBR1-203ENST00000562173 MYCP01106 439 aaPredicted RBP9.2□□□□□ -0.94
UBR1-203ENST00000562173 RAB15P59190 212 aa9.2□□□□□ -0.94
UBR1-203ENST00000562173 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
UBR1-203ENST00000562173 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
UBR1-203ENST00000562173 FAM9AQ8IZU1 332 aaPredicted RBP9.2□□□□□ -0.94
UBR1-203ENST00000562173 PHLDB1Q86UU1 1377 aa9.2□□□□□ -0.94
UBR1-203ENST00000562173 C9orf84Q5VXU9 1444 aa9.2□□□□□ -0.94
UBR1-203ENST00000562173 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
UBR1-203ENST00000562173 TIMP2P16035 220 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms