RNA–Protein interactions for RNA: ENST00000562047.1

EDC3-203, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-203ENST00000562047 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
EDC3-203ENST00000562047 POLD1P28340 1107 aa14.97□□□□□ -0.01
EDC3-203ENST00000562047 PTGER2P43116 358 aa14.97□□□□□ -0.01
EDC3-203ENST00000562047 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
EDC3-203ENST00000562047 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.01
EDC3-203ENST00000562047 KDM6AO15550 1401 aaPredicted RBP14.96□□□□□ -0.01
EDC3-203ENST00000562047 ATP6V1AP38606 617 aa14.96□□□□□ -0.01
EDC3-203ENST00000562047 QSER1Q2KHR3 1735 aa14.96□□□□□ -0.01
EDC3-203ENST00000562047 NFATC2IPQ8NCF5 419 aa14.96□□□□□ -0.01
EDC3-203ENST00000562047 MTHFSDQ2M296 383 aaKnown RBP14.95□□□□□ -0.02
EDC3-203ENST00000562047 C5P01031 1676 aa14.94□□□□□ -0.02
EDC3-203ENST00000562047 FCHSD2O94868 740 aa14.94□□□□□ -0.02
EDC3-203ENST00000562047 U2AF1L5P0DN76 240 aaPredicted RBP14.94□□□□□ -0.02
EDC3-203ENST00000562047 U2AF1Q01081 240 aaKnown RBP eCLIP14.94□□□□□ -0.02
EDC3-203ENST00000562047 RALBP1Q15311 655 aa14.94□□□□□ -0.02
EDC3-203ENST00000562047 ARXQ96QS3 562 aa14.94□□□□□ -0.02
EDC3-203ENST00000562047 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
EDC3-203ENST00000562047 SLC52A2Q9HAB3 445 aa14.94□□□□□ -0.02
EDC3-203ENST00000562047 RNMTO43148 476 aaKnown RBP14.93□□□□□ -0.02
EDC3-203ENST00000562047 SSFA2P28290 1259 aa14.93□□□□□ -0.02
EDC3-203ENST00000562047 SGIP1Q9BQI5 828 aa14.93□□□□□ -0.02
EDC3-203ENST00000562047 GNAT3A8MTJ3 354 aa14.92□□□□□ -0.02
EDC3-203ENST00000562047 NEFMP07197 916 aa14.92□□□□□ -0.02
EDC3-203ENST00000562047 DDX10Q13206 875 aaKnown RBP14.92□□□□□ -0.02
EDC3-203ENST00000562047 COL23A1Q86Y22 540 aaPredicted RBP14.92□□□□□ -0.02
EDC3-203ENST00000562047 TAF1LQ8IZX4 1826 aa14.92□□□□□ -0.02
EDC3-203ENST00000562047 PRKAR2BP31323 418 aa14.91□□□□□ -0.02
EDC3-203ENST00000562047 RC3H1Q5TC82 1133 aaKnown RBP14.91□□□□□ -0.02
EDC3-203ENST00000562047 LINC00116Q8NCU8 138 aa14.91□□□□□ -0.02
EDC3-203ENST00000562047 RSPH6AQ9H0K4 717 aa14.91□□□□□ -0.02
EDC3-203ENST00000562047 PNNQ9H307 717 aaKnown RBP14.91□□□□□ -0.02
EDC3-203ENST00000562047 LGR6Q9HBX8 967 aa14.91□□□□□ -0.02
EDC3-203ENST00000562047 C4BP0C0L5 1744 aa14.91□□□□□ -0.02
EDC3-203ENST00000562047 MAP3K5Q99683 1374 aa14.9□□□□□ -0.02
EDC3-203ENST00000562047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.9□□□□□ -0.02
EDC3-203ENST00000562047 GNPATO15228 680 aa14.9□□□□□ -0.02
EDC3-203ENST00000562047 PTCD1O75127 700 aaKnown RBP14.9□□□□□ -0.02
EDC3-203ENST00000562047 TEFQ10587 303 aa14.9□□□□□ -0.02
EDC3-203ENST00000562047 ITPK1Q13572 414 aa14.9□□□□□ -0.02
EDC3-203ENST00000562047 RTCBQ9Y3I0 505 aaKnown RBP14.9□□□□□ -0.02
EDC3-203ENST00000562047 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
EDC3-203ENST00000562047 ZNF831Q5JPB2 1677 aa14.9□□□□□ -0.02
EDC3-203ENST00000562047 FHDC1Q9C0D6 1143 aaPredicted RBP14.89□□□□□ -0.03
EDC3-203ENST00000562047 GOLGB1Q14789 3259 aaKnown RBP14.89□□□□□ -0.03
EDC3-203ENST00000562047 PHF14O94880 888 aa14.88□□□□□ -0.03
EDC3-203ENST00000562047 RTF1Q92541 710 aaKnown RBP14.88□□□□□ -0.03
EDC3-203ENST00000562047 SYT17Q9BSW7 474 aa14.88□□□□□ -0.03
EDC3-203ENST00000562047 CNTNAP4Q9C0A0 1308 aa14.88□□□□□ -0.03
EDC3-203ENST00000562047 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
EDC3-203ENST00000562047 TRAPPC3LQ5T215 181 aa14.87□□□□□ -0.03
EDC3-203ENST00000562047 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
EDC3-203ENST00000562047 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
EDC3-203ENST00000562047 UTRNP46939 3433 aa14.87□□□□□ -0.03
EDC3-203ENST00000562047 MRC1P22897 1456 aa14.87□□□□□ -0.03
EDC3-203ENST00000562047 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
EDC3-203ENST00000562047 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
EDC3-203ENST00000562047 PHACTR3Q96KR7 559 aa14.86□□□□□ -0.03
EDC3-203ENST00000562047 RPS6KA4O75676 772 aa14.85□□□□□ -0.03
EDC3-203ENST00000562047 RFC4P35249 363 aa14.85□□□□□ -0.03
EDC3-203ENST00000562047 IL17REQ8NFR9 667 aa14.85□□□□□ -0.03
EDC3-203ENST00000562047 UBR3Q6ZT12 1888 aa14.84□□□□□ -0.03
EDC3-203ENST00000562047 ADAMTS7Q9UKP4 1686 aa14.84□□□□□ -0.03
EDC3-203ENST00000562047 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
EDC3-203ENST00000562047 MYBBP1AQ9BQG0 1328 aaKnown RBP14.84□□□□□ -0.03
EDC3-203ENST00000562047 CEMIPQ8WUJ3 1361 aa14.84□□□□□ -0.03
EDC3-203ENST00000562047 COL24A1Q17RW2 1714 aa14.83□□□□□ -0.03
EDC3-203ENST00000562047 STARD3NLO95772 234 aa14.83□□□□□ -0.04
EDC3-203ENST00000562047 SLC39A6Q13433 755 aa14.83□□□□□ -0.04
EDC3-203ENST00000562047 MSL1Q68DK7 614 aa14.83□□□□□ -0.04
EDC3-203ENST00000562047 ZNF790Q6PG37 636 aa14.83□□□□□ -0.04
EDC3-203ENST00000562047 NLGN1Q8N2Q7 840 aa14.83□□□□□ -0.04
EDC3-203ENST00000562047 TEX13AQ9BXU3 409 aaPredicted RBP14.83□□□□□ -0.04
EDC3-203ENST00000562047 AMIGO3Q86WK7 504 aa14.82□□□□□ -0.04
EDC3-203ENST00000562047 KLHL34Q8N239 644 aa14.82□□□□□ -0.04
EDC3-203ENST00000562047 ARHGEF1Q92888 912 aaKnown RBP14.82□□□□□ -0.04
EDC3-203ENST00000562047 CD2APQ9Y5K6 639 aa14.82□□□□□ -0.04
EDC3-203ENST00000562047 MAPK8IP3Q9UPT6 1336 aa14.82□□□□□ -0.04
EDC3-203ENST00000562047 BTBD11A6QL63 1104 aa14.81□□□□□ -0.04
EDC3-203ENST00000562047 CCDC87Q9NVE4 849 aa14.81□□□□□ -0.04
EDC3-203ENST00000562047 COL5A3P25940 1745 aaPredicted RBP14.8□□□□□ -0.04
EDC3-203ENST00000562047 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
EDC3-203ENST00000562047 CYP19A1P11511 503 aaPredicted RBP14.8□□□□□ -0.04
EDC3-203ENST00000562047 DNAJC10Q8IXB1 793 aa14.8□□□□□ -0.04
EDC3-203ENST00000562047 FMNL2Q96PY5 1086 aa14.8□□□□□ -0.04
EDC3-203ENST00000562047 CICQ96RK0 1608 aaPredicted RBP14.8□□□□□ -0.04
EDC3-203ENST00000562047 INTS5Q6P9B9 1019 aaKnown RBP14.79□□□□□ -0.04
EDC3-203ENST00000562047 SMIM5Q71RC9 77 aa14.79□□□□□ -0.04
EDC3-203ENST00000562047 PLEKHF1Q96S99 279 aa14.79□□□□□ -0.04
EDC3-203ENST00000562047 ZPR1O75312 459 aa14.78□□□□□ -0.04
EDC3-203ENST00000562047 MCM10Q7L590 875 aa14.78□□□□□ -0.04
EDC3-203ENST00000562047 NPM2Q86SE8 214 aaKnown RBP14.78□□□□□ -0.04
EDC3-203ENST00000562047 PRKRIP1Q9H875 184 aaPredicted RBP14.78□□□□□ -0.04
EDC3-203ENST00000562047 KCPQ6ZWJ8 1503 aa14.77□□□□□ -0.04
EDC3-203ENST00000562047 HEG1Q9ULI3 1381 aa14.77□□□□□ -0.04
EDC3-203ENST00000562047 WDR43Q15061 677 aaKnown RBP eCLIP14.77□□□□□ -0.05
EDC3-203ENST00000562047 TAF7Q15545 349 aaPredicted RBP14.77□□□□□ -0.05
EDC3-203ENST00000562047 NFE2L2Q16236 605 aa14.77□□□□□ -0.05
EDC3-203ENST00000562047 GPR162Q16538 588 aa14.77□□□□□ -0.05
EDC3-203ENST00000562047 PNISRQ8TF01 805 aaKnown RBP14.77□□□□□ -0.05
EDC3-203ENST00000562047 ZNF496Q96IT1 587 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms