RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 PALD1Q9ULE6 856 aa16.99■□□□□ 0.31
VPS9D1-202ENST00000561976 METP08581 1390 aa16.98■□□□□ 0.31
VPS9D1-202ENST00000561976 MX1P20591 662 aa16.98■□□□□ 0.31
VPS9D1-202ENST00000561976 CSPP1Q1MSJ5 1256 aa16.98■□□□□ 0.31
VPS9D1-202ENST00000561976 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
VPS9D1-202ENST00000561976 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
VPS9D1-202ENST00000561976 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
VPS9D1-202ENST00000561976 CYB5RLQ6IPT4 315 aa16.97■□□□□ 0.31
VPS9D1-202ENST00000561976 SYAP1Q96A49 352 aaPredicted RBP16.97■□□□□ 0.31
VPS9D1-202ENST00000561976 TSPY26PQ9H489 355 aa16.97■□□□□ 0.31
VPS9D1-202ENST00000561976 UQCRHLA0A096LP55 91 aa16.97■□□□□ 0.31
VPS9D1-202ENST00000561976 UQCRHP07919 91 aa16.97■□□□□ 0.31
VPS9D1-202ENST00000561976 MCM5P33992 734 aa16.97■□□□□ 0.31
VPS9D1-202ENST00000561976 CUL4AQ13619 759 aa16.97■□□□□ 0.31
VPS9D1-202ENST00000561976 STK31Q9BXU1 1019 aa16.97■□□□□ 0.31
VPS9D1-202ENST00000561976 MLECQ14165 292 aa16.96■□□□□ 0.31
VPS9D1-202ENST00000561976 FOXO3O43524 673 aa16.96■□□□□ 0.31
VPS9D1-202ENST00000561976 UPF3BQ9BZI7 483 aaKnown RBP16.96■□□□□ 0.31
VPS9D1-202ENST00000561976 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
VPS9D1-202ENST00000561976 CHMLP26374 656 aa16.95■□□□□ 0.3
VPS9D1-202ENST00000561976 CRB1P82279 1406 aa16.95■□□□□ 0.3
VPS9D1-202ENST00000561976 INTS4Q96HW7 963 aaKnown RBP16.95■□□□□ 0.3
VPS9D1-202ENST00000561976 GDPD2Q9HCC8 539 aa16.95■□□□□ 0.3
VPS9D1-202ENST00000561976 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
VPS9D1-202ENST00000561976 PRR36Q9H6K5 1346 aa16.95■□□□□ 0.3
VPS9D1-202ENST00000561976 ANAPC15P60006 121 aa16.94■□□□□ 0.3
VPS9D1-202ENST00000561976 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
VPS9D1-202ENST00000561976 MON2Q7Z3U7 1717 aa16.94■□□□□ 0.3
VPS9D1-202ENST00000561976 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
VPS9D1-202ENST00000561976 GNAI3P08754 354 aa16.94■□□□□ 0.3
VPS9D1-202ENST00000561976 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
VPS9D1-202ENST00000561976 PHF14O94880 888 aa16.93■□□□□ 0.3
VPS9D1-202ENST00000561976 MTHFSDQ2M296 383 aaKnown RBP16.93■□□□□ 0.3
VPS9D1-202ENST00000561976 TPRNQ4KMQ1 711 aa16.93■□□□□ 0.3
VPS9D1-202ENST00000561976 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
VPS9D1-202ENST00000561976 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
VPS9D1-202ENST00000561976 NRKQ7Z2Y5 1582 aa16.92■□□□□ 0.3
VPS9D1-202ENST00000561976 C3P01024 1663 aa16.92■□□□□ 0.3
VPS9D1-202ENST00000561976 GADD45BO75293 160 aaPredicted RBP16.92■□□□□ 0.3
VPS9D1-202ENST00000561976 ACEP12821 1306 aa16.92■□□□□ 0.3
VPS9D1-202ENST00000561976 ATP8B2P98198 1209 aa16.91■□□□□ 0.3
VPS9D1-202ENST00000561976 ITSN1Q15811 1721 aa16.91■□□□□ 0.3
VPS9D1-202ENST00000561976 FLIIQ13045 1269 aa16.91■□□□□ 0.3
VPS9D1-202ENST00000561976 USP48Q86UV5 1035 aa16.91■□□□□ 0.3
VPS9D1-202ENST00000561976 MAP7D2Q96T17 732 aa16.91■□□□□ 0.3
VPS9D1-202ENST00000561976 MAP3K19Q56UN5 1328 aa16.91■□□□□ 0.3
VPS9D1-202ENST00000561976 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
VPS9D1-202ENST00000561976 ZBTB7CA1YPR0 619 aa16.9■□□□□ 0.3
VPS9D1-202ENST00000561976 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
VPS9D1-202ENST00000561976 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
VPS9D1-202ENST00000561976 LRRFIP2Q9Y608 721 aaKnown RBP16.9■□□□□ 0.3
VPS9D1-202ENST00000561976 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.3
VPS9D1-202ENST00000561976 DNTTIP2Q5QJE6 756 aaKnown RBP16.89■□□□□ 0.3
VPS9D1-202ENST00000561976 SASS6Q6UVJ0 657 aa16.89■□□□□ 0.3
VPS9D1-202ENST00000561976 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.3
VPS9D1-202ENST00000561976 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
VPS9D1-202ENST00000561976 MPNDQ8N594 471 aa16.89■□□□□ 0.29
VPS9D1-202ENST00000561976 SSH2Q76I76 1423 aa16.89■□□□□ 0.29
VPS9D1-202ENST00000561976 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
VPS9D1-202ENST00000561976 AKAP12Q02952 1782 aa16.88■□□□□ 0.29
VPS9D1-202ENST00000561976 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
VPS9D1-202ENST00000561976 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
VPS9D1-202ENST00000561976 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
VPS9D1-202ENST00000561976 DYNC1I1O14576 645 aa16.88■□□□□ 0.29
VPS9D1-202ENST00000561976 MAP4K4O95819 1239 aaPredicted RBP16.88■□□□□ 0.29
VPS9D1-202ENST00000561976 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
VPS9D1-202ENST00000561976 ARID3AQ99856 593 aa16.87■□□□□ 0.29
VPS9D1-202ENST00000561976 HDGFP51858 240 aaKnown RBP16.87■□□□□ 0.29
VPS9D1-202ENST00000561976 OVOS2A0A0J9YW53 1432 aa16.86■□□□□ 0.29
VPS9D1-202ENST00000561976 OVOS2Q6IE36 1432 aa16.86■□□□□ 0.29
VPS9D1-202ENST00000561976 NRXN3Q9Y4C0 1643 aa16.86■□□□□ 0.29
VPS9D1-202ENST00000561976 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
VPS9D1-202ENST00000561976 UBTFL1P0CB47 393 aaPredicted RBP16.86■□□□□ 0.29
VPS9D1-202ENST00000561976 FAM184AQ8NB25 1140 aa16.86■□□□□ 0.29
VPS9D1-202ENST00000561976 IL25Q9H293 177 aa16.86■□□□□ 0.29
VPS9D1-202ENST00000561976 HSPA4P34932 840 aa16.85■□□□□ 0.29
VPS9D1-202ENST00000561976 USP25Q9UHP3 1055 aa16.85■□□□□ 0.29
VPS9D1-202ENST00000561976 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
VPS9D1-202ENST00000561976 AMPHP49418 695 aa16.84■□□□□ 0.29
VPS9D1-202ENST00000561976 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
VPS9D1-202ENST00000561976 ZNF830Q96NB3 372 aaPredicted RBP16.84■□□□□ 0.29
VPS9D1-202ENST00000561976 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
VPS9D1-202ENST00000561976 CNPY2Q9Y2B0 182 aa16.84■□□□□ 0.29
VPS9D1-202ENST00000561976 UVSSAQ2YD98 709 aa16.84■□□□□ 0.29
VPS9D1-202ENST00000561976 LARP6Q9BRS8 491 aaKnown RBP16.84■□□□□ 0.29
VPS9D1-202ENST00000561976 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
VPS9D1-202ENST00000561976 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.29
VPS9D1-202ENST00000561976 ROBO2Q9HCK4 1378 aa16.83■□□□□ 0.29
VPS9D1-202ENST00000561976 TECPR2O15040 1411 aa16.83■□□□□ 0.28
VPS9D1-202ENST00000561976 USP6P35125 1406 aa16.83■□□□□ 0.28
VPS9D1-202ENST00000561976 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
VPS9D1-202ENST00000561976 EYA1Q99502 592 aa16.83■□□□□ 0.28
VPS9D1-202ENST00000561976 AOX1Q06278 1338 aa16.83■□□□□ 0.28
VPS9D1-202ENST00000561976 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
VPS9D1-202ENST00000561976 USP44Q9H0E7 712 aa16.83■□□□□ 0.28
VPS9D1-202ENST00000561976 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
VPS9D1-202ENST00000561976 IL17RAQ96F46 866 aa16.82■□□□□ 0.28
VPS9D1-202ENST00000561976 ADCY5O95622 1261 aa16.82■□□□□ 0.28
VPS9D1-202ENST00000561976 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
VPS9D1-202ENST00000561976 HCLS1P14317 486 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms