RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TBC1D9Q6ZT07 1266 aa22.57■■□□□ 1.2
RAB40C-206ENST00000561781 TRIM34Q9BYJ4 488 aa22.57■■□□□ 1.2
RAB40C-206ENST00000561781 YY1AP1Q9H869 796 aa22.57■■□□□ 1.2
RAB40C-206ENST00000561781 MORC2Q9Y6X9 1032 aaPredicted RBP22.57■■□□□ 1.2
RAB40C-206ENST00000561781 MSH6P52701 1360 aa22.57■■□□□ 1.2
RAB40C-206ENST00000561781 UVSSAQ2YD98 709 aa22.57■■□□□ 1.2
RAB40C-206ENST00000561781 C19orf44Q9H6X5 657 aa22.57■■□□□ 1.2
RAB40C-206ENST00000561781 CWC22Q9HCG8 908 aaKnown RBP22.57■■□□□ 1.2
RAB40C-206ENST00000561781 SMC4Q9NTJ3 1288 aa22.57■■□□□ 1.2
RAB40C-206ENST00000561781 CREBRFQ8IUR6 639 aa22.56■■□□□ 1.2
RAB40C-206ENST00000561781 SIRT1Q96EB6 747 aa22.56■■□□□ 1.2
RAB40C-206ENST00000561781 SRPK2P78362 688 aaKnown RBP22.56■■□□□ 1.2
RAB40C-206ENST00000561781 CDK19Q9BWU1 502 aa22.56■■□□□ 1.2
RAB40C-206ENST00000561781 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
RAB40C-206ENST00000561781 FAM184AQ8NB25 1140 aa22.55■■□□□ 1.2
RAB40C-206ENST00000561781 ZBTB40Q9NUA8 1239 aa22.55■■□□□ 1.2
RAB40C-206ENST00000561781 PRR36Q9H6K5 1346 aa22.54■■□□□ 1.2
RAB40C-206ENST00000561781 WASLO00401 505 aaPredicted RBP22.54■■□□□ 1.2
RAB40C-206ENST00000561781 ATF3P18847 181 aa22.53■■□□□ 1.2
RAB40C-206ENST00000561781 PIP4K2BP78356 416 aa22.53■■□□□ 1.2
RAB40C-206ENST00000561781 ATF7IPQ6VMQ6 1270 aa22.53■■□□□ 1.2
RAB40C-206ENST00000561781 MMP14P50281 582 aa22.52■■□□□ 1.2
RAB40C-206ENST00000561781 TMEM57Q8N5G2 664 aa22.52■■□□□ 1.2
RAB40C-206ENST00000561781 SYAP1Q96A49 352 aaPredicted RBP22.52■■□□□ 1.2
RAB40C-206ENST00000561781 TTC12Q9H892 705 aaPredicted RBP22.52■■□□□ 1.2
RAB40C-206ENST00000561781 EFCC1Q9HA90 598 aa22.52■■□□□ 1.2
RAB40C-206ENST00000561781 NCBP1Q09161 790 aaKnown RBP22.51■■□□□ 1.19
RAB40C-206ENST00000561781 DDX17Q92841 729 aaKnown RBP22.51■■□□□ 1.19
RAB40C-206ENST00000561781 TSR2Q969E8 191 aaKnown RBP22.51■■□□□ 1.19
RAB40C-206ENST00000561781 ORAI2Q96SN7 254 aa22.51■■□□□ 1.19
RAB40C-206ENST00000561781 NSFL1CQ9UNZ2 370 aaKnown RBP22.51■■□□□ 1.19
RAB40C-206ENST00000561781 CERS3Q8IU89 383 aa22.51■■□□□ 1.19
RAB40C-206ENST00000561781 C17orf53Q8N3J3 647 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-206ENST00000561781 AEBP1Q8IUX7 1158 aa22.5■■□□□ 1.19
RAB40C-206ENST00000561781 KRT222Q8N1A0 295 aa22.5■■□□□ 1.19
RAB40C-206ENST00000561781 GEMIN8Q9NWZ8 242 aaKnown RBP22.5■■□□□ 1.19
RAB40C-206ENST00000561781 UBAP1LF5GYI3 381 aa22.5■■□□□ 1.19
RAB40C-206ENST00000561781 SSH1Q8WYL5 1049 aa22.5■■□□□ 1.19
RAB40C-206ENST00000561781 PHF14O94880 888 aa22.49■■□□□ 1.19
RAB40C-206ENST00000561781 RNF216Q9NWF9 866 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-206ENST00000561781 RABEP1Q15276 862 aa22.49■■□□□ 1.19
RAB40C-206ENST00000561781 NOB1Q9ULX3 412 aaKnown RBP22.49■■□□□ 1.19
RAB40C-206ENST00000561781 CDC42BPGQ6DT37 1551 aa22.49■■□□□ 1.19
RAB40C-206ENST00000561781 CT47B1P0C2W7 299 aaPredicted RBP22.48■■□□□ 1.19
RAB40C-206ENST00000561781 ADGRB2O60241 1585 aa22.48■■□□□ 1.19
RAB40C-206ENST00000561781 EVC2Q86UK5 1308 aa22.48■■□□□ 1.19
RAB40C-206ENST00000561781 MST1RQ04912 1400 aa22.48■■□□□ 1.19
RAB40C-206ENST00000561781 CHAMP1Q96JM3 812 aa22.48■■□□□ 1.19
RAB40C-206ENST00000561781 RGPD8O14715 1765 aaPredicted RBP22.48■■□□□ 1.19
RAB40C-206ENST00000561781 TPM3P06753 285 aa22.47■■□□□ 1.19
RAB40C-206ENST00000561781 KIAA1524Q8TCG1 905 aa22.47■■□□□ 1.19
RAB40C-206ENST00000561781 USP32Q8NFA0 1604 aa22.47■■□□□ 1.19
RAB40C-206ENST00000561781 EXOSC9Q06265 439 aaKnown RBP22.47■■□□□ 1.19
RAB40C-206ENST00000561781 ESCO1Q5FWF5 840 aa22.47■■□□□ 1.19
RAB40C-206ENST00000561781 ANKRD45Q5TZF3 282 aa22.47■■□□□ 1.19
RAB40C-206ENST00000561781 CADPS2Q86UW7 1296 aa22.47■■□□□ 1.19
RAB40C-206ENST00000561781 SBNO2Q9Y2G9 1366 aa22.47■■□□□ 1.19
RAB40C-206ENST00000561781 MPNDQ8N594 471 aa22.46■■□□□ 1.19
RAB40C-206ENST00000561781 KIF18AQ8NI77 898 aa22.46■■□□□ 1.19
RAB40C-206ENST00000561781 NUDT16Q96DE0 195 aaKnown RBP22.46■■□□□ 1.19
RAB40C-206ENST00000561781 SLAIN2Q9P270 581 aa22.46■■□□□ 1.19
RAB40C-206ENST00000561781 ATP7BP35670 1465 aa22.46■■□□□ 1.19
RAB40C-206ENST00000561781 ZDHHC9Q9Y397 364 aa22.46■■□□□ 1.19
RAB40C-206ENST00000561781 FEZ2Q9UHY8 353 aaPredicted RBP22.45■■□□□ 1.18
RAB40C-206ENST00000561781 ZGPATQ8N5A5 531 aaKnown RBP22.45■■□□□ 1.18
RAB40C-206ENST00000561781 FMN2Q9NZ56 1722 aa22.44■■□□□ 1.18
RAB40C-206ENST00000561781 C1orf167Q5SNV9 1468 aa22.44■■□□□ 1.18
RAB40C-206ENST00000561781 ADCY5O95622 1261 aa22.44■■□□□ 1.18
RAB40C-206ENST00000561781 MORC1Q86VD1 984 aa22.44■■□□□ 1.18
RAB40C-206ENST00000561781 USP25Q9UHP3 1055 aa22.43■■□□□ 1.18
RAB40C-206ENST00000561781 SLC12A5Q9H2X9 1139 aa22.42■■□□□ 1.18
RAB40C-206ENST00000561781 CABP1Q9NZU7 370 aa22.42■■□□□ 1.18
RAB40C-206ENST00000561781 ERICH4A6NGS2 130 aa22.42■■□□□ 1.18
RAB40C-206ENST00000561781 CLGNO14967 610 aa22.42■■□□□ 1.18
RAB40C-206ENST00000561781 CDC45O75419 566 aa22.42■■□□□ 1.18
RAB40C-206ENST00000561781 ANKRD36BQ8N2N9 1353 aa22.42■■□□□ 1.18
RAB40C-206ENST00000561781 DCCP43146 1447 aa22.42■■□□□ 1.18
RAB40C-206ENST00000561781 BRINP3Q76B58 766 aa22.41■■□□□ 1.18
RAB40C-206ENST00000561781 TNNT3P45378 269 aaPredicted RBP22.41■■□□□ 1.18
RAB40C-206ENST00000561781 FOXO3O43524 673 aa22.4■■□□□ 1.18
RAB40C-206ENST00000561781 SMTNL1A8MU46 457 aa22.39■■□□□ 1.18
RAB40C-206ENST00000561781 PPIP5K1Q6PFW1 1433 aa22.39■■□□□ 1.18
RAB40C-206ENST00000561781 HDAC5Q9UQL6 1122 aa22.39■■□□□ 1.17
RAB40C-206ENST00000561781 GCC1Q96CN9 775 aa22.38■■□□□ 1.17
RAB40C-206ENST00000561781 TOM1O60784 492 aa22.38■■□□□ 1.17
RAB40C-206ENST00000561781 NCBP3Q53F19 620 aaKnown RBP22.38■■□□□ 1.17
RAB40C-206ENST00000561781 AXDND1Q5T1B0 1012 aaPredicted RBP22.38■■□□□ 1.17
RAB40C-206ENST00000561781 MTHFSP49914 203 aa22.37■■□□□ 1.17
RAB40C-206ENST00000561781 FAM53CQ9NYF3 392 aa22.37■■□□□ 1.17
RAB40C-206ENST00000561781 PSEN1P49768 467 aa22.37■■□□□ 1.17
RAB40C-206ENST00000561781 FOXD4L5Q5VV16 416 aaPredicted RBP22.37■■□□□ 1.17
RAB40C-206ENST00000561781 FOXD4L4Q8WXT5 416 aaPredicted RBP22.37■■□□□ 1.17
RAB40C-206ENST00000561781 CFAP44Q96MT7 982 aa22.37■■□□□ 1.17
RAB40C-206ENST00000561781 CCDC61Q9Y6R9 512 aa22.37■■□□□ 1.17
RAB40C-206ENST00000561781 NSD3Q9BZ95 1437 aa22.36■■□□□ 1.17
RAB40C-206ENST00000561781 ROBO1Q9Y6N7 1651 aa22.35■■□□□ 1.17
RAB40C-206ENST00000561781 SOX12O15370 315 aa22.35■■□□□ 1.17
RAB40C-206ENST00000561781 PHF8Q9UPP1 1060 aa22.35■■□□□ 1.17
RAB40C-206ENST00000561781 IPO8O15397 1037 aaKnown RBP22.35■■□□□ 1.17
RAB40C-206ENST00000561781 GSPT1P15170 499 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms