RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 CCDC146Q8IYE0 955 aa31.03■■■□□ 2.56
SMPD3-202ENST00000561749 PNNQ9H307 717 aaKnown RBP31.03■■■□□ 2.56
SMPD3-202ENST00000561749 ATG3Q9NT62 314 aa31.03■■■□□ 2.56
SMPD3-202ENST00000561749 C5P01031 1676 aa31.03■■■□□ 2.56
SMPD3-202ENST00000561749 SLC27A3Q5K4L6 730 aa31.02■■■□□ 2.56
SMPD3-202ENST00000561749 IL17REQ8NFR9 667 aa31.02■■■□□ 2.56
SMPD3-202ENST00000561749 SLC52A2Q9HAB3 445 aa31.02■■■□□ 2.56
SMPD3-202ENST00000561749 ADAMTS8Q9UP79 889 aa31.02■■■□□ 2.56
SMPD3-202ENST00000561749 SIPA1L3O60292 1781 aaPredicted RBP31.02■■■□□ 2.56
SMPD3-202ENST00000561749 MRS2Q9HD23 443 aa30.98■■■□□ 2.55
SMPD3-202ENST00000561749 STK32BQ9NY57 414 aa30.98■■■□□ 2.55
SMPD3-202ENST00000561749 TUBGCP6Q96RT7 1819 aa30.97■■■□□ 2.55
SMPD3-202ENST00000561749 DCTN1Q14203 1278 aa30.97■■■□□ 2.55
SMPD3-202ENST00000561749 NFE2L2Q16236 605 aa30.97■■■□□ 2.55
SMPD3-202ENST00000561749 MCM10Q7L590 875 aa30.97■■■□□ 2.55
SMPD3-202ENST00000561749 RTF1Q92541 710 aaKnown RBP30.97■■■□□ 2.55
SMPD3-202ENST00000561749 RBM42Q9BTD8 480 aaKnown RBP30.96■■■□□ 2.55
SMPD3-202ENST00000561749 LOC102724428A0A0B4J2F2 783 aa30.95■■■□□ 2.55
SMPD3-202ENST00000561749 SIK1P57059 783 aa30.95■■■□□ 2.55
SMPD3-202ENST00000561749 TEFQ10587 303 aa30.95■■■□□ 2.55
SMPD3-202ENST00000561749 ZNF827Q17R98 1081 aa30.95■■■□□ 2.55
SMPD3-202ENST00000561749 SLC39A6Q13433 755 aa30.94■■■□□ 2.54
SMPD3-202ENST00000561749 CEMIPQ8WUJ3 1361 aa30.93■■■□□ 2.54
SMPD3-202ENST00000561749 SLC15A2Q16348 729 aa30.93■■■□□ 2.54
SMPD3-202ENST00000561749 PTCD1O75127 700 aaKnown RBP30.92■■■□□ 2.54
SMPD3-202ENST00000561749 RUNDC1Q96C34 613 aa30.92■■■□□ 2.54
SMPD3-202ENST00000561749 RRP7AQ9Y3A4 280 aaKnown RBP30.92■■■□□ 2.54
SMPD3-202ENST00000561749 C4BP0C0L5 1744 aa30.91■■■□□ 2.54
SMPD3-202ENST00000561749 ATP6V1AP38606 617 aa30.91■■■□□ 2.54
SMPD3-202ENST00000561749 ITPK1Q13572 414 aa30.9■■■□□ 2.54
SMPD3-202ENST00000561749 AKT1S1Q96B36 256 aa30.9■■■□□ 2.54
SMPD3-202ENST00000561749 SLC4A9Q96Q91 983 aa30.9■■■□□ 2.54
SMPD3-202ENST00000561749 UBR2Q8IWV8 1755 aa30.89■■■□□ 2.54
SMPD3-202ENST00000561749 HTATSF1O43719 755 aaKnown RBP30.89■■■□□ 2.54
SMPD3-202ENST00000561749 ZNF831Q5JPB2 1677 aa30.89■■■□□ 2.54
SMPD3-202ENST00000561749 TJP1Q07157 1748 aa30.89■■■□□ 2.54
SMPD3-202ENST00000561749 CASZ1Q86V15 1759 aa30.89■■■□□ 2.54
SMPD3-202ENST00000561749 TMPOP42166 694 aaKnown RBP30.88■■■□□ 2.53
SMPD3-202ENST00000561749 RIPK4P57078 832 aa30.88■■■□□ 2.53
SMPD3-202ENST00000561749 NEUROD2Q15784 382 aa30.88■■■□□ 2.53
SMPD3-202ENST00000561749 THUMPD2Q9BTF0 503 aaKnown RBP30.88■■■□□ 2.53
SMPD3-202ENST00000561749 COL5A3P25940 1745 aaPredicted RBP30.87■■■□□ 2.53
SMPD3-202ENST00000561749 QSER1Q2KHR3 1735 aa30.87■■■□□ 2.53
SMPD3-202ENST00000561749 LINC00116Q8NCU8 138 aa30.87■■■□□ 2.53
SMPD3-202ENST00000561749 PNISRQ8TF01 805 aaKnown RBP30.87■■■□□ 2.53
SMPD3-202ENST00000561749 KCPQ6ZWJ8 1503 aa30.87■■■□□ 2.53
SMPD3-202ENST00000561749 PDGFDQ9GZP0 370 aaPredicted RBP30.86■■■□□ 2.53
SMPD3-202ENST00000561749 TFCP2L1Q9NZI6 479 aa30.84■■■□□ 2.53
SMPD3-202ENST00000561749 UBR3Q6ZT12 1888 aa30.83■■■□□ 2.53
SMPD3-202ENST00000561749 BTBD11A6QL63 1104 aa30.82■■■□□ 2.52
SMPD3-202ENST00000561749 TTC5Q8N0Z6 440 aa30.82■■■□□ 2.52
SMPD3-202ENST00000561749 CICQ96RK0 1608 aaPredicted RBP30.81■■■□□ 2.52
SMPD3-202ENST00000561749 KCNQ3O43525 872 aa30.81■■■□□ 2.52
SMPD3-202ENST00000561749 SENP3-EIF4A1A0A087X0R7 540 aa30.8■■■□□ 2.52
SMPD3-202ENST00000561749 DIEXFQ68CQ4 756 aaKnown RBP30.8■■■□□ 2.52
SMPD3-202ENST00000561749 ZNF790Q6PG37 636 aa30.8■■■□□ 2.52
SMPD3-202ENST00000561749 AK7Q96M32 723 aa30.8■■■□□ 2.52
SMPD3-202ENST00000561749 MYH14Q7Z406 1995 aaKnown RBP30.79■■■□□ 2.52
SMPD3-202ENST00000561749 APAF1O14727 1248 aa30.79■■■□□ 2.52
SMPD3-202ENST00000561749 KDM3BQ7LBC6 1761 aa30.79■■■□□ 2.52
SMPD3-202ENST00000561749 PNPLA7Q6ZV29 1317 aa30.78■■■□□ 2.52
SMPD3-202ENST00000561749 SMIM5Q71RC9 77 aa30.78■■■□□ 2.52
SMPD3-202ENST00000561749 MIS18AQ9NYP9 233 aa30.78■■■□□ 2.52
SMPD3-202ENST00000561749 LMOD3Q0VAK6 560 aa30.77■■■□□ 2.52
SMPD3-202ENST00000561749 TAF7Q15545 349 aaPredicted RBP30.77■■■□□ 2.52
SMPD3-202ENST00000561749 DNAJC10Q8IXB1 793 aa30.77■■■□□ 2.52
SMPD3-202ENST00000561749 ZNF496Q96IT1 587 aaPredicted RBP30.77■■■□□ 2.52
SMPD3-202ENST00000561749 FAM9BQ8IZU0 186 aa30.76■■■□□ 2.51
SMPD3-202ENST00000561749 HMGB2P26583 209 aaKnown RBP30.75■■■□□ 2.51
SMPD3-202ENST00000561749 AMIGO3Q86WK7 504 aa30.75■■■□□ 2.51
SMPD3-202ENST00000561749 TRIM35Q9UPQ4 493 aa30.75■■■□□ 2.51
SMPD3-202ENST00000561749 GNPATO15228 680 aa30.74■■■□□ 2.51
SMPD3-202ENST00000561749 PHF14O94880 888 aa30.74■■■□□ 2.51
SMPD3-202ENST00000561749 ZBTB7AO95365 584 aa30.74■■■□□ 2.51
SMPD3-202ENST00000561749 MSH5O43196 834 aa30.73■■■□□ 2.51
SMPD3-202ENST00000561749 HEG1Q9ULI3 1381 aa30.72■■■□□ 2.51
SMPD3-202ENST00000561749 COL23A1Q86Y22 540 aaPredicted RBP30.72■■■□□ 2.51
SMPD3-202ENST00000561749 LRP5O75197 1615 aa30.72■■■□□ 2.51
SMPD3-202ENST00000561749 FMNL2Q96PY5 1086 aa30.71■■■□□ 2.51
SMPD3-202ENST00000561749 CNTNAP4Q9C0A0 1308 aa30.71■■■□□ 2.51
SMPD3-202ENST00000561749 CRKLP46109 303 aaKnown RBP30.7■■■□□ 2.51
SMPD3-202ENST00000561749 VSIG10Q8N0Z9 540 aa30.69■■■□□ 2.5
SMPD3-202ENST00000561749 ATF5Q9Y2D1 282 aaPredicted RBP30.69■■■□□ 2.5
SMPD3-202ENST00000561749 RC3H1Q5TC82 1133 aaKnown RBP30.68■■■□□ 2.5
SMPD3-202ENST00000561749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.67■■■□□ 2.5
SMPD3-202ENST00000561749 CYP19A1P11511 503 aaPredicted RBP30.67■■■□□ 2.5
SMPD3-202ENST00000561749 C4AP0C0L4 1744 aa30.65■■■□□ 2.5
SMPD3-202ENST00000561749 PRAMEF22A3QJZ6 481 aa30.65■■■□□ 2.5
SMPD3-202ENST00000561749 INTS5Q6P9B9 1019 aaKnown RBP30.65■■■□□ 2.5
SMPD3-202ENST00000561749 SPON1Q9HCB6 807 aa30.65■■■□□ 2.5
SMPD3-202ENST00000561749 TSPYL4Q9UJ04 414 aa30.65■■■□□ 2.5
SMPD3-202ENST00000561749 RTCBQ9Y3I0 505 aaKnown RBP30.65■■■□□ 2.5
SMPD3-202ENST00000561749 LAS1LQ9Y4W2 734 aaKnown RBP30.65■■■□□ 2.5
SMPD3-202ENST00000561749 SSFA2P28290 1259 aa30.64■■■□□ 2.5
SMPD3-202ENST00000561749 MIER1Q8N108 512 aa30.64■■■□□ 2.5
SMPD3-202ENST00000561749 FLAD1Q8NFF5 587 aa30.64■■■□□ 2.5
SMPD3-202ENST00000561749 CCDC87Q9NVE4 849 aa30.64■■■□□ 2.5
SMPD3-202ENST00000561749 CCER2I3L3R5 266 aa30.63■■■□□ 2.49
SMPD3-202ENST00000561749 RPS6KA4O75676 772 aa30.63■■■□□ 2.49
SMPD3-202ENST00000561749 MTFR1LQ9H019 292 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms