RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
USB1-204ENST00000561568 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
USB1-204ENST00000561568 TAF7Q15545 349 aaPredicted RBP21.49■■□□□ 1.03
USB1-204ENST00000561568 TXNRD1Q16881 649 aa21.49■■□□□ 1.03
USB1-204ENST00000561568 SLC27A3Q5K4L6 730 aa21.48■■□□□ 1.03
USB1-204ENST00000561568 PROM2Q8N271 834 aa21.48■■□□□ 1.03
USB1-204ENST00000561568 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
USB1-204ENST00000561568 TNS1Q9HBL0 1735 aaKnown RBP21.47■■□□□ 1.03
USB1-204ENST00000561568 NGEFQ8N5V2 710 aa21.47■■□□□ 1.03
USB1-204ENST00000561568 TRIM35Q9UPQ4 493 aa21.47■■□□□ 1.03
USB1-204ENST00000561568 ITGB4P16144 1822 aa21.47■■□□□ 1.03
USB1-204ENST00000561568 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
USB1-204ENST00000561568 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
USB1-204ENST00000561568 BTAF1O14981 1849 aa21.45■■□□□ 1.03
USB1-204ENST00000561568 ADAMTS7Q9UKP4 1686 aa21.45■■□□□ 1.02
USB1-204ENST00000561568 PALLDQ8WX93 1383 aa21.45■■□□□ 1.02
USB1-204ENST00000561568 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
USB1-204ENST00000561568 CCDC27Q2M243 656 aa21.44■■□□□ 1.02
USB1-204ENST00000561568 TTC5Q8N0Z6 440 aa21.44■■□□□ 1.02
USB1-204ENST00000561568 LOC102724428A0A0B4J2F2 783 aa21.43■■□□□ 1.02
USB1-204ENST00000561568 SIK1P57059 783 aa21.43■■□□□ 1.02
USB1-204ENST00000561568 ZNF790Q6PG37 636 aa21.43■■□□□ 1.02
USB1-204ENST00000561568 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
USB1-204ENST00000561568 THUMPD2Q9BTF0 503 aaKnown RBP21.43■■□□□ 1.02
USB1-204ENST00000561568 BABAM1Q9NWV8 329 aa21.43■■□□□ 1.02
USB1-204ENST00000561568 CCNL1Q9UK58 526 aaPredicted RBP21.43■■□□□ 1.02
USB1-204ENST00000561568 MRC1P22897 1456 aa21.42■■□□□ 1.02
USB1-204ENST00000561568 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
USB1-204ENST00000561568 NBPF14Q5TI25 921 aa21.42■■□□□ 1.02
USB1-204ENST00000561568 PTCD1O75127 700 aaKnown RBP21.41■■□□□ 1.02
USB1-204ENST00000561568 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
USB1-204ENST00000561568 ATP6V1AP38606 617 aa21.4■■□□□ 1.02
USB1-204ENST00000561568 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
USB1-204ENST00000561568 WWC1Q8IX03 1113 aa21.39■■□□□ 1.01
USB1-204ENST00000561568 VSIG10Q8N0Z9 540 aa21.39■■□□□ 1.01
USB1-204ENST00000561568 RGPD3A6NKT7 1758 aaPredicted RBP21.38■■□□□ 1.01
USB1-204ENST00000561568 RGPD4Q7Z3J3 1758 aa21.38■■□□□ 1.01
USB1-204ENST00000561568 MIS18AQ9NYP9 233 aa21.38■■□□□ 1.01
USB1-204ENST00000561568 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
USB1-204ENST00000561568 KCNQ4P56696 695 aa21.37■■□□□ 1.01
USB1-204ENST00000561568 FMNL2Q96PY5 1086 aa21.37■■□□□ 1.01
USB1-204ENST00000561568 SALL2Q9Y467 1007 aaPredicted RBP21.37■■□□□ 1.01
USB1-204ENST00000561568 CHL1O00533 1208 aa21.36■■□□□ 1.01
USB1-204ENST00000561568 WDR63Q8IWG1 891 aa21.36■■□□□ 1.01
USB1-204ENST00000561568 CFAP44Q96MT7 982 aa21.36■■□□□ 1.01
USB1-204ENST00000561568 TEX13AQ9BXU3 409 aaPredicted RBP21.36■■□□□ 1.01
USB1-204ENST00000561568 TSPYL4Q9UJ04 414 aa21.36■■□□□ 1.01
USB1-204ENST00000561568 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
USB1-204ENST00000561568 KCNQ3O43525 872 aa21.35■■□□□ 1.01
USB1-204ENST00000561568 ZNF496Q96IT1 587 aaPredicted RBP21.35■■□□□ 1.01
USB1-204ENST00000561568 SLC4A9Q96Q91 983 aa21.35■■□□□ 1.01
USB1-204ENST00000561568 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
USB1-204ENST00000561568 GNAI1P63096 354 aa21.34■■□□□ 1.01
USB1-204ENST00000561568 STK32BQ9NY57 414 aa21.34■■□□□ 1.01
USB1-204ENST00000561568 LY75O60449 1722 aa21.34■■□□□ 1.01
USB1-204ENST00000561568 ITPK1Q13572 414 aa21.33■■□□□ 1.01
USB1-204ENST00000561568 IFT57Q9NWB7 429 aa21.33■■□□□ 1.01
USB1-204ENST00000561568 ZNF853P0CG23 659 aa21.32■■□□□ 1
USB1-204ENST00000561568 SLC15A2Q16348 729 aa21.32■■□□□ 1
USB1-204ENST00000561568 SIPA1L3O60292 1781 aaPredicted RBP21.32■■□□□ 1
USB1-204ENST00000561568 IL16Q14005 1332 aa21.31■■□□□ 1
USB1-204ENST00000561568 SNRPA1P09661 255 aaKnown RBP21.31■■□□□ 1
USB1-204ENST00000561568 EIF4A1P60842 406 aaKnown RBP21.31■■□□□ 1
USB1-204ENST00000561568 RC3H1Q5TC82 1133 aaKnown RBP21.31■■□□□ 1
USB1-204ENST00000561568 HEG1Q9ULI3 1381 aa21.31■■□□□ 1
USB1-204ENST00000561568 STARD3NLO95772 234 aa21.3■■□□□ 1
USB1-204ENST00000561568 AKT1S1Q96B36 256 aa21.3■■□□□ 1
USB1-204ENST00000561568 RREB1Q92766 1687 aa21.29■■□□□ 1
USB1-204ENST00000561568 DNAJC10Q8IXB1 793 aa21.29■■□□□ 1
USB1-204ENST00000561568 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
USB1-204ENST00000561568 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
USB1-204ENST00000561568 AK7Q96M32 723 aa21.28■■□□□ 1
USB1-204ENST00000561568 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
USB1-204ENST00000561568 CYP19A1P11511 503 aaPredicted RBP21.27■■□□□ 1
USB1-204ENST00000561568 MBIPQ9NS73 344 aa21.27■■□□□ 1
USB1-204ENST00000561568 KCPQ6ZWJ8 1503 aa21.27■■□□□ 1
USB1-204ENST00000561568 ZNF831Q5JPB2 1677 aa21.27■■□□□ 1
USB1-204ENST00000561568 PAPPAQ13219 1627 aa21.26■□□□□ 0.99
USB1-204ENST00000561568 FLAD1Q8NFF5 587 aa21.26■□□□□ 0.99
USB1-204ENST00000561568 ANO8Q9HCE9 1232 aaPredicted RBP21.26■□□□□ 0.99
USB1-204ENST00000561568 CNTNAP4Q9C0A0 1308 aa21.26■□□□□ 0.99
USB1-204ENST00000561568 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
USB1-204ENST00000561568 R3HDM1Q15032 1099 aaKnown RBP21.25■□□□□ 0.99
USB1-204ENST00000561568 ZNF827Q17R98 1081 aa21.25■□□□□ 0.99
USB1-204ENST00000561568 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
USB1-204ENST00000561568 NUP188Q5SRE5 1749 aa21.24■□□□□ 0.99
USB1-204ENST00000561568 RPS6KA4O75676 772 aa21.24■□□□□ 0.99
USB1-204ENST00000561568 CCDC87Q9NVE4 849 aa21.24■□□□□ 0.99
USB1-204ENST00000561568 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
USB1-204ENST00000561568 ZNF521Q96K83 1311 aa21.24■□□□□ 0.99
USB1-204ENST00000561568 GOLGA2Q08379 1002 aa21.23■□□□□ 0.99
USB1-204ENST00000561568 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
USB1-204ENST00000561568 MYH16Q9H6N6 1097 aa21.23■□□□□ 0.99
USB1-204ENST00000561568 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
USB1-204ENST00000561568 GNPATO15228 680 aa21.22■□□□□ 0.99
USB1-204ENST00000561568 HNRNPUQ00839 825 aaKnown RBP eCLIP21.22■□□□□ 0.99
USB1-204ENST00000561568 CHMP4AQ9BY43 222 aa21.22■□□□□ 0.99
USB1-204ENST00000561568 PRAMEF22A3QJZ6 481 aa21.21■□□□□ 0.99
USB1-204ENST00000561568 PSDA5PKW4 1024 aaPredicted RBP21.21■□□□□ 0.99
USB1-204ENST00000561568 HOXB7P09629 217 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms