RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 KDM6AO15550 1401 aaPredicted RBP18.05■□□□□ 0.48
SHF-210ENST00000561239 ANP32CO43423 234 aa18.04■□□□□ 0.48
SHF-210ENST00000561239 PRKAR2BP31323 418 aa18.04■□□□□ 0.48
SHF-210ENST00000561239 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
SHF-210ENST00000561239 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
SHF-210ENST00000561239 AK7Q96M32 723 aa18.04■□□□□ 0.48
SHF-210ENST00000561239 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
SHF-210ENST00000561239 QSER1Q2KHR3 1735 aa18.03■□□□□ 0.48
SHF-210ENST00000561239 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
SHF-210ENST00000561239 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
SHF-210ENST00000561239 PLEKHF1Q96S99 279 aa18.03■□□□□ 0.48
SHF-210ENST00000561239 C5P01031 1676 aa18.03■□□□□ 0.48
SHF-210ENST00000561239 NFATC2IPQ8NCF5 419 aa18.02■□□□□ 0.48
SHF-210ENST00000561239 MSH5O43196 834 aa18.01■□□□□ 0.47
SHF-210ENST00000561239 POLD1P28340 1107 aa18.01■□□□□ 0.47
SHF-210ENST00000561239 CCDC184Q52MB2 194 aa18.01■□□□□ 0.47
SHF-210ENST00000561239 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
SHF-210ENST00000561239 RNMTO43148 476 aaKnown RBP18■□□□□ 0.47
SHF-210ENST00000561239 PTGER2P43116 358 aa18■□□□□ 0.47
SHF-210ENST00000561239 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
SHF-210ENST00000561239 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
SHF-210ENST00000561239 NEFMP07197 916 aa17.99■□□□□ 0.47
SHF-210ENST00000561239 MRC1P22897 1456 aa17.99■□□□□ 0.47
SHF-210ENST00000561239 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
SHF-210ENST00000561239 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
SHF-210ENST00000561239 SSFA2P28290 1259 aa17.98■□□□□ 0.47
SHF-210ENST00000561239 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
SHF-210ENST00000561239 PNNQ9H307 717 aaKnown RBP17.98■□□□□ 0.47
SHF-210ENST00000561239 LGR6Q9HBX8 967 aa17.98■□□□□ 0.47
SHF-210ENST00000561239 MAP3K5Q99683 1374 aa17.98■□□□□ 0.47
SHF-210ENST00000561239 SCN11AQ9UI33 1791 aa17.98■□□□□ 0.47
SHF-210ENST00000561239 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
SHF-210ENST00000561239 LINC00116Q8NCU8 138 aa17.97■□□□□ 0.47
SHF-210ENST00000561239 ARXQ96QS3 562 aa17.97■□□□□ 0.47
SHF-210ENST00000561239 SGIP1Q9BQI5 828 aa17.97■□□□□ 0.47
SHF-210ENST00000561239 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
SHF-210ENST00000561239 ITPK1Q13572 414 aa17.96■□□□□ 0.47
SHF-210ENST00000561239 ADAMTS8Q9UP79 889 aa17.96■□□□□ 0.47
SHF-210ENST00000561239 CEMIPQ8WUJ3 1361 aa17.95■□□□□ 0.46
SHF-210ENST00000561239 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
SHF-210ENST00000561239 TEFQ10587 303 aa17.95■□□□□ 0.46
SHF-210ENST00000561239 RC3H1Q5TC82 1133 aaKnown RBP17.95■□□□□ 0.46
SHF-210ENST00000561239 TUBGCP6Q96RT7 1819 aa17.94■□□□□ 0.46
SHF-210ENST00000561239 GNPATO15228 680 aa17.94■□□□□ 0.46
SHF-210ENST00000561239 IL17REQ8NFR9 667 aa17.94■□□□□ 0.46
SHF-210ENST00000561239 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
SHF-210ENST00000561239 RTF1Q92541 710 aaKnown RBP17.94■□□□□ 0.46
SHF-210ENST00000561239 RTCBQ9Y3I0 505 aaKnown RBP17.94■□□□□ 0.46
SHF-210ENST00000561239 CNTNAP4Q9C0A0 1308 aa17.94■□□□□ 0.46
SHF-210ENST00000561239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.93■□□□□ 0.46
SHF-210ENST00000561239 WDR43Q15061 677 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHF-210ENST00000561239 HTATSF1O43719 755 aaKnown RBP17.92■□□□□ 0.46
SHF-210ENST00000561239 PHF14O94880 888 aa17.92■□□□□ 0.46
SHF-210ENST00000561239 ADRA2BP18089 450 aa17.92■□□□□ 0.46
SHF-210ENST00000561239 TRAPPC3LQ5T215 181 aa17.92■□□□□ 0.46
SHF-210ENST00000561239 TTC5Q8N0Z6 440 aa17.92■□□□□ 0.46
SHF-210ENST00000561239 SLC4A9Q96Q91 983 aa17.92■□□□□ 0.46
SHF-210ENST00000561239 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
SHF-210ENST00000561239 NFE2L2Q16236 605 aa17.91■□□□□ 0.46
SHF-210ENST00000561239 VSIG10Q8N0Z9 540 aa17.91■□□□□ 0.46
SHF-210ENST00000561239 FHDC1Q9C0D6 1143 aaPredicted RBP17.91■□□□□ 0.46
SHF-210ENST00000561239 MRS2Q9HD23 443 aa17.91■□□□□ 0.46
SHF-210ENST00000561239 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
SHF-210ENST00000561239 RUNDC1Q96C34 613 aa17.9■□□□□ 0.46
SHF-210ENST00000561239 SYT17Q9BSW7 474 aa17.9■□□□□ 0.46
SHF-210ENST00000561239 UBR3Q6ZT12 1888 aa17.89■□□□□ 0.45
SHF-210ENST00000561239 RPS6KA4O75676 772 aa17.89■□□□□ 0.45
SHF-210ENST00000561239 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.45
SHF-210ENST00000561239 COL24A1Q17RW2 1714 aa17.89■□□□□ 0.45
SHF-210ENST00000561239 DLG5Q8TDM6 1919 aa17.88■□□□□ 0.45
SHF-210ENST00000561239 SLC39A6Q13433 755 aa17.88■□□□□ 0.45
SHF-210ENST00000561239 RFC4P35249 363 aa17.87■□□□□ 0.45
SHF-210ENST00000561239 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
SHF-210ENST00000561239 CRKLP46109 303 aaKnown RBP17.87■□□□□ 0.45
SHF-210ENST00000561239 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
SHF-210ENST00000561239 ZNF790Q6PG37 636 aa17.87■□□□□ 0.45
SHF-210ENST00000561239 CCDC146Q8IYE0 955 aa17.87■□□□□ 0.45
SHF-210ENST00000561239 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
SHF-210ENST00000561239 COL5A3P25940 1745 aaPredicted RBP17.86■□□□□ 0.45
SHF-210ENST00000561239 BTBD11A6QL63 1104 aa17.86■□□□□ 0.45
SHF-210ENST00000561239 MSL1Q68DK7 614 aa17.86■□□□□ 0.45
SHF-210ENST00000561239 AMIGO3Q86WK7 504 aa17.86■□□□□ 0.45
SHF-210ENST00000561239 TEX13AQ9BXU3 409 aaPredicted RBP17.86■□□□□ 0.45
SHF-210ENST00000561239 STARD3NLO95772 234 aa17.85■□□□□ 0.45
SHF-210ENST00000561239 MCM10Q7L590 875 aa17.85■□□□□ 0.45
SHF-210ENST00000561239 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
SHF-210ENST00000561239 NLGN1Q8N2Q7 840 aa17.85■□□□□ 0.45
SHF-210ENST00000561239 ARHGEF1Q92888 912 aaKnown RBP17.85■□□□□ 0.45
SHF-210ENST00000561239 KCPQ6ZWJ8 1503 aa17.84■□□□□ 0.45
SHF-210ENST00000561239 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
SHF-210ENST00000561239 DCTN1Q14203 1278 aa17.84■□□□□ 0.45
SHF-210ENST00000561239 DNAJC10Q8IXB1 793 aa17.84■□□□□ 0.45
SHF-210ENST00000561239 FMNL2Q96PY5 1086 aa17.84■□□□□ 0.45
SHF-210ENST00000561239 CCDC87Q9NVE4 849 aa17.84■□□□□ 0.45
SHF-210ENST00000561239 UBR2Q8IWV8 1755 aa17.84■□□□□ 0.45
SHF-210ENST00000561239 CYP19A1P11511 503 aaPredicted RBP17.83■□□□□ 0.44
SHF-210ENST00000561239 SMIM5Q71RC9 77 aa17.83■□□□□ 0.44
SHF-210ENST00000561239 TJP1Q07157 1748 aa17.82■□□□□ 0.44
SHF-210ENST00000561239 RIPK4P57078 832 aa17.82■□□□□ 0.44
SHF-210ENST00000561239 INTS5Q6P9B9 1019 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms