RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 PLEKHF1Q96S99 279 aa22.79■■□□□ 1.24
KNSTRN-213ENST00000561169 CCDC184Q52MB2 194 aa22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 NFATC2IPQ8NCF5 419 aa22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 IL17REQ8NFR9 667 aa22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 SMARCC1Q92922 1105 aaPredicted RBP22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 PDGFDQ9GZP0 370 aaPredicted RBP22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 UBR2Q8IWV8 1755 aa22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 ZNF831Q5JPB2 1677 aa22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 UBR3Q6ZT12 1888 aa22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 C4BP0C0L5 1744 aa22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 COL5A3P25940 1745 aaPredicted RBP22.78■■□□□ 1.24
KNSTRN-213ENST00000561169 MYH14Q7Z406 1995 aaKnown RBP22.77■■□□□ 1.24
KNSTRN-213ENST00000561169 TJP1Q07157 1748 aa22.77■■□□□ 1.24
KNSTRN-213ENST00000561169 GNAT3A8MTJ3 354 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 SLC15A2Q16348 729 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 AKT1S1Q96B36 256 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 SLC4A9Q96Q91 983 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 SLC52A2Q9HAB3 445 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 LRP5O75197 1615 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 LOC102724428A0A0B4J2F2 783 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 SIK1P57059 783 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 STK32BQ9NY57 414 aa22.76■■□□□ 1.23
KNSTRN-213ENST00000561169 CEMIPQ8WUJ3 1361 aa22.75■■□□□ 1.23
KNSTRN-213ENST00000561169 ITPK1Q13572 414 aa22.74■■□□□ 1.23
KNSTRN-213ENST00000561169 CICQ96RK0 1608 aaPredicted RBP22.74■■□□□ 1.23
KNSTRN-213ENST00000561169 KCPQ6ZWJ8 1503 aa22.73■■□□□ 1.23
KNSTRN-213ENST00000561169 SLC39A6Q13433 755 aa22.71■■□□□ 1.23
KNSTRN-213ENST00000561169 DCTN1Q14203 1278 aa22.71■■□□□ 1.23
KNSTRN-213ENST00000561169 LINC00116Q8NCU8 138 aa22.71■■□□□ 1.23
KNSTRN-213ENST00000561169 MCM10Q7L590 875 aa22.7■■□□□ 1.22
KNSTRN-213ENST00000561169 AMIGO3Q86WK7 504 aa22.7■■□□□ 1.22
KNSTRN-213ENST00000561169 ADAMTS8Q9UP79 889 aa22.7■■□□□ 1.22
KNSTRN-213ENST00000561169 ANP32CO43423 234 aa22.69■■□□□ 1.22
KNSTRN-213ENST00000561169 PTCD1O75127 700 aaKnown RBP22.69■■□□□ 1.22
KNSTRN-213ENST00000561169 CCDC146Q8IYE0 955 aa22.69■■□□□ 1.22
KNSTRN-213ENST00000561169 RBM42Q9BTD8 480 aaKnown RBP22.69■■□□□ 1.22
KNSTRN-213ENST00000561169 PNPLA7Q6ZV29 1317 aa22.68■■□□□ 1.22
KNSTRN-213ENST00000561169 WDR43Q15061 677 aaKnown RBP eCLIP22.68■■□□□ 1.22
KNSTRN-213ENST00000561169 NFE2L2Q16236 605 aa22.68■■□□□ 1.22
KNSTRN-213ENST00000561169 ATP6V1AP38606 617 aa22.67■■□□□ 1.22
KNSTRN-213ENST00000561169 MAPK8IP3Q9UPT6 1336 aa22.66■■□□□ 1.22
KNSTRN-213ENST00000561169 SMIM5Q71RC9 77 aa22.66■■□□□ 1.22
KNSTRN-213ENST00000561169 COL24A1Q17RW2 1714 aa22.66■■□□□ 1.22
KNSTRN-213ENST00000561169 TEFQ10587 303 aa22.65■■□□□ 1.22
KNSTRN-213ENST00000561169 KDM3BQ7LBC6 1761 aa22.65■■□□□ 1.22
KNSTRN-213ENST00000561169 THUMPD2Q9BTF0 503 aaKnown RBP22.64■■□□□ 1.22
KNSTRN-213ENST00000561169 TFCP2L1Q9NZI6 479 aa22.64■■□□□ 1.22
KNSTRN-213ENST00000561169 ZBTB7AO95365 584 aa22.63■■□□□ 1.21
KNSTRN-213ENST00000561169 NEFMP07197 916 aa22.63■■□□□ 1.21
KNSTRN-213ENST00000561169 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
KNSTRN-213ENST00000561169 KCNQ3O43525 872 aa22.63■■□□□ 1.21
KNSTRN-213ENST00000561169 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
KNSTRN-213ENST00000561169 RTF1Q92541 710 aaKnown RBP22.63■■□□□ 1.21
KNSTRN-213ENST00000561169 RRP7AQ9Y3A4 280 aaKnown RBP22.63■■□□□ 1.21
KNSTRN-213ENST00000561169 C4AP0C0L4 1744 aa22.62■■□□□ 1.21
KNSTRN-213ENST00000561169 TMPOP42166 694 aaKnown RBP22.62■■□□□ 1.21
KNSTRN-213ENST00000561169 COL23A1Q86Y22 540 aaPredicted RBP22.61■■□□□ 1.21
KNSTRN-213ENST00000561169 RUNDC1Q96C34 613 aa22.61■■□□□ 1.21
KNSTRN-213ENST00000561169 MRS2Q9HD23 443 aa22.61■■□□□ 1.21
KNSTRN-213ENST00000561169 ZNF790Q6PG37 636 aa22.6■■□□□ 1.21
KNSTRN-213ENST00000561169 DNAJC10Q8IXB1 793 aa22.6■■□□□ 1.21
KNSTRN-213ENST00000561169 ZNF496Q96IT1 587 aaPredicted RBP22.6■■□□□ 1.21
KNSTRN-213ENST00000561169 AK7Q96M32 723 aa22.6■■□□□ 1.21
KNSTRN-213ENST00000561169 PNISRQ8TF01 805 aaKnown RBP22.59■■□□□ 1.21
KNSTRN-213ENST00000561169 ATF5Q9Y2D1 282 aaPredicted RBP22.59■■□□□ 1.21
KNSTRN-213ENST00000561169 CNTNAP4Q9C0A0 1308 aa22.58■■□□□ 1.21
KNSTRN-213ENST00000561169 GNPATO15228 680 aa22.58■■□□□ 1.21
KNSTRN-213ENST00000561169 RIPK4P57078 832 aa22.58■■□□□ 1.21
KNSTRN-213ENST00000561169 BTBD11A6QL63 1104 aa22.57■■□□□ 1.2
KNSTRN-213ENST00000561169 PHF14O94880 888 aa22.56■■□□□ 1.2
KNSTRN-213ENST00000561169 PTGER2P43116 358 aa22.56■■□□□ 1.2
KNSTRN-213ENST00000561169 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
KNSTRN-213ENST00000561169 NEUROD2Q15784 382 aa22.56■■□□□ 1.2
KNSTRN-213ENST00000561169 SPON1Q9HCB6 807 aa22.56■■□□□ 1.2
KNSTRN-213ENST00000561169 MIS18AQ9NYP9 233 aa22.56■■□□□ 1.2
KNSTRN-213ENST00000561169 HEG1Q9ULI3 1381 aa22.55■■□□□ 1.2
KNSTRN-213ENST00000561169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.55■■□□□ 1.2
KNSTRN-213ENST00000561169 TTC5Q8N0Z6 440 aa22.55■■□□□ 1.2
KNSTRN-213ENST00000561169 SGIP1Q9BQI5 828 aa22.55■■□□□ 1.2
KNSTRN-213ENST00000561169 MTFR1LQ9H019 292 aa22.55■■□□□ 1.2
KNSTRN-213ENST00000561169 TRIM35Q9UPQ4 493 aa22.55■■□□□ 1.2
KNSTRN-213ENST00000561169 RC3H1Q5TC82 1133 aaKnown RBP22.54■■□□□ 1.2
KNSTRN-213ENST00000561169 LAMB4A4D0S4 1761 aa22.53■■□□□ 1.2
KNSTRN-213ENST00000561169 APAF1O14727 1248 aa22.53■■□□□ 1.2
KNSTRN-213ENST00000561169 CYP19A1P11511 503 aaPredicted RBP22.53■■□□□ 1.2
KNSTRN-213ENST00000561169 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
KNSTRN-213ENST00000561169 INTS5Q6P9B9 1019 aaKnown RBP22.53■■□□□ 1.2
KNSTRN-213ENST00000561169 SSFA2P28290 1259 aa22.52■■□□□ 1.2
KNSTRN-213ENST00000561169 VSIG10Q8N0Z9 540 aa22.52■■□□□ 1.2
KNSTRN-213ENST00000561169 SENP3-EIF4A1A0A087X0R7 540 aa22.51■■□□□ 1.19
KNSTRN-213ENST00000561169 PRAMEF22A3QJZ6 481 aa22.51■■□□□ 1.19
KNSTRN-213ENST00000561169 MSH5O43196 834 aa22.51■■□□□ 1.19
KNSTRN-213ENST00000561169 HMGB2P26583 209 aaKnown RBP22.51■■□□□ 1.19
KNSTRN-213ENST00000561169 MSL1Q68DK7 614 aa22.51■■□□□ 1.19
KNSTRN-213ENST00000561169 RPS6KA4O75676 772 aa22.5■■□□□ 1.19
KNSTRN-213ENST00000561169 SLC16A10Q8TF71 515 aa22.5■■□□□ 1.19
KNSTRN-213ENST00000561169 FMNL2Q96PY5 1086 aa22.5■■□□□ 1.19
KNSTRN-213ENST00000561169 FLAD1Q8NFF5 587 aa22.5■■□□□ 1.19
KNSTRN-213ENST00000561169 CCDC87Q9NVE4 849 aa22.5■■□□□ 1.19
KNSTRN-213ENST00000561169 ZBTB1Q9Y2K1 713 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms