RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 ZBTB7CA1YPR0 619 aa18.03■□□□□ 0.48
CRTC3-210ENST00000560927 ESCO1Q5FWF5 840 aa18.03■□□□□ 0.48
CRTC3-210ENST00000560927 ARXQ96QS3 562 aa18.03■□□□□ 0.48
CRTC3-210ENST00000560927 NFAT5O94916 1531 aa18.02■□□□□ 0.48
CRTC3-210ENST00000560927 OSBPL3Q9H4L5 887 aa18.02■□□□□ 0.48
CRTC3-210ENST00000560927 PHAXQ9H814 394 aaKnown RBP18.02■□□□□ 0.48
CRTC3-210ENST00000560927 LGR6Q9HBX8 967 aa18.02■□□□□ 0.48
CRTC3-210ENST00000560927 GNAI3P08754 354 aa18.01■□□□□ 0.47
CRTC3-210ENST00000560927 PSME1Q06323 249 aa18.01■□□□□ 0.47
CRTC3-210ENST00000560927 RABEP1Q15276 862 aa18.01■□□□□ 0.47
CRTC3-210ENST00000560927 HDGFL1Q5TGJ6 251 aa18.01■□□□□ 0.47
CRTC3-210ENST00000560927 BABAM1Q9NWV8 329 aa18.01■□□□□ 0.47
CRTC3-210ENST00000560927 DDX11L8A8MPP1 907 aa18.01■□□□□ 0.47
CRTC3-210ENST00000560927 LRRFIP2Q9Y608 721 aaKnown RBP18.01■□□□□ 0.47
CRTC3-210ENST00000560927 CEMIPQ8WUJ3 1361 aa18.01■□□□□ 0.47
CRTC3-210ENST00000560927 ATP8B2P98198 1209 aa18■□□□□ 0.47
CRTC3-210ENST00000560927 CASC1Q6TDU7 716 aa18■□□□□ 0.47
CRTC3-210ENST00000560927 SALL3Q9BXA9 1300 aa18■□□□□ 0.47
CRTC3-210ENST00000560927 EIF5BO60841 1220 aaKnown RBP18■□□□□ 0.47
CRTC3-210ENST00000560927 PLEKHG5O94827 1062 aa18■□□□□ 0.47
CRTC3-210ENST00000560927 LRRC59Q96AG4 307 aaKnown RBP18■□□□□ 0.47
CRTC3-210ENST00000560927 USP44Q9H0E7 712 aa18■□□□□ 0.47
CRTC3-210ENST00000560927 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
CRTC3-210ENST00000560927 SETD1BQ9UPS6 1966 aaKnown RBP18■□□□□ 0.47
CRTC3-210ENST00000560927 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
CRTC3-210ENST00000560927 ADGRL3Q9HAR2 1447 aa17.99■□□□□ 0.47
CRTC3-210ENST00000560927 EIF2S2P20042 333 aaKnown RBP17.98■□□□□ 0.47
CRTC3-210ENST00000560927 XPCQ01831 940 aaPredicted RBP17.98■□□□□ 0.47
CRTC3-210ENST00000560927 FSD2A1L4K1 749 aa17.98■□□□□ 0.47
CRTC3-210ENST00000560927 KCNQ3O43525 872 aa17.98■□□□□ 0.47
CRTC3-210ENST00000560927 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
CRTC3-210ENST00000560927 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
CRTC3-210ENST00000560927 SSFA2P28290 1259 aa17.97■□□□□ 0.47
CRTC3-210ENST00000560927 GOLGA6L3A6NEY3 463 aa17.97■□□□□ 0.47
CRTC3-210ENST00000560927 ERC2O15083 957 aa17.97■□□□□ 0.47
CRTC3-210ENST00000560927 EIF4A1P60842 406 aaKnown RBP17.97■□□□□ 0.47
CRTC3-210ENST00000560927 REC8O95072 547 aa17.96■□□□□ 0.47
CRTC3-210ENST00000560927 GBP4Q96PP9 640 aa17.96■□□□□ 0.47
CRTC3-210ENST00000560927 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
CRTC3-210ENST00000560927 PXDNLA1KZ92 1463 aa17.96■□□□□ 0.47
CRTC3-210ENST00000560927 CACNA1FO60840 1977 aa17.96■□□□□ 0.47
CRTC3-210ENST00000560927 UBTFL1P0CB47 393 aaPredicted RBP17.96■□□□□ 0.47
CRTC3-210ENST00000560927 MX1P20591 662 aa17.96■□□□□ 0.47
CRTC3-210ENST00000560927 KCNH5Q8NCM2 988 aa17.96■□□□□ 0.47
CRTC3-210ENST00000560927 RGPD2P0DJD1 1756 aa17.96■□□□□ 0.47
CRTC3-210ENST00000560927 MED1Q15648 1581 aaPredicted RBP17.96■□□□□ 0.47
CRTC3-210ENST00000560927 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
CRTC3-210ENST00000560927 CHPF2Q9P2E5 772 aa17.95■□□□□ 0.46
CRTC3-210ENST00000560927 N4BP2Q86UW6 1770 aaPredicted RBP17.94■□□□□ 0.46
CRTC3-210ENST00000560927 MPRIPQ6WCQ1 1025 aa17.94■□□□□ 0.46
CRTC3-210ENST00000560927 ZNF530Q6P9A1 599 aaPredicted RBP17.94■□□□□ 0.46
CRTC3-210ENST00000560927 ZNF142P52746 1687 aaPredicted RBP17.94■□□□□ 0.46
CRTC3-210ENST00000560927 ANXA1P04083 346 aa17.93■□□□□ 0.46
CRTC3-210ENST00000560927 GCP02774 474 aa17.93■□□□□ 0.46
CRTC3-210ENST00000560927 IL1RAPL2Q9NP60 686 aa17.93■□□□□ 0.46
CRTC3-210ENST00000560927 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
CRTC3-210ENST00000560927 PANK2Q9BZ23 570 aa17.92■□□□□ 0.46
CRTC3-210ENST00000560927 SRCIN1Q9C0H9 1055 aa17.92■□□□□ 0.46
CRTC3-210ENST00000560927 TUBGCP6Q96RT7 1819 aa17.92■□□□□ 0.46
CRTC3-210ENST00000560927 BTBD11A6QL63 1104 aa17.92■□□□□ 0.46
CRTC3-210ENST00000560927 NBPF7P0C2Y1 421 aaPredicted RBP17.92■□□□□ 0.46
CRTC3-210ENST00000560927 AKAP4Q5JQC9 854 aa17.92■□□□□ 0.46
CRTC3-210ENST00000560927 UNC5CLQ8IV45 518 aa17.92■□□□□ 0.46
CRTC3-210ENST00000560927 RILPL2Q969X0 211 aa17.92■□□□□ 0.46
CRTC3-210ENST00000560927 PI4KAP2A4QPH2 592 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 TEFQ10587 303 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 LMOD2Q6P5Q4 547 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 PPP1R42Q7Z4L9 355 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 ARHGEF25Q86VW2 580 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 PI4KAP1Q8N8J0 262 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 ESYT1Q9BSJ8 1104 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 PXDNQ92626 1479 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 KDM3BQ7LBC6 1761 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 STAP2Q9UGK3 403 aa17.91■□□□□ 0.46
CRTC3-210ENST00000560927 ST18O60284 1047 aa17.9■□□□□ 0.46
CRTC3-210ENST00000560927 PKP1Q13835 747 aa17.9■□□□□ 0.46
CRTC3-210ENST00000560927 AK9Q5TCS8 1911 aa17.9■□□□□ 0.46
CRTC3-210ENST00000560927 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
CRTC3-210ENST00000560927 CHMLP26374 656 aa17.9■□□□□ 0.46
CRTC3-210ENST00000560927 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
CRTC3-210ENST00000560927 BEND3Q5T5X7 828 aa17.9■□□□□ 0.46
CRTC3-210ENST00000560927 ZGPATQ8N5A5 531 aaKnown RBP17.9■□□□□ 0.46
CRTC3-210ENST00000560927 LMO7Q8WWI1 1683 aa17.89■□□□□ 0.45
CRTC3-210ENST00000560927 HOXB7P09629 217 aa17.89■□□□□ 0.45
CRTC3-210ENST00000560927 POLA2Q14181 598 aa17.89■□□□□ 0.45
CRTC3-210ENST00000560927 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.45
CRTC3-210ENST00000560927 DNAAF4Q8WXU2 420 aa17.89■□□□□ 0.45
CRTC3-210ENST00000560927 NPHP4O75161 1426 aaPredicted RBP17.89■□□□□ 0.45
CRTC3-210ENST00000560927 SURF6O75683 361 aaKnown RBP17.89■□□□□ 0.45
CRTC3-210ENST00000560927 BAG4O95429 457 aaKnown RBP17.89■□□□□ 0.45
CRTC3-210ENST00000560927 CLEC17AQ6ZS10 378 aa17.89■□□□□ 0.45
CRTC3-210ENST00000560927 ANKRD24Q8TF21 1146 aa17.89■□□□□ 0.45
CRTC3-210ENST00000560927 AXIN2Q9Y2T1 843 aa17.89■□□□□ 0.45
CRTC3-210ENST00000560927 RNMTO43148 476 aaKnown RBP17.88■□□□□ 0.45
CRTC3-210ENST00000560927 SRGAP3O43295 1099 aa17.88■□□□□ 0.45
CRTC3-210ENST00000560927 PALD1Q9ULE6 856 aa17.88■□□□□ 0.45
CRTC3-210ENST00000560927 ADCY9O60503 1353 aa17.88■□□□□ 0.45
CRTC3-210ENST00000560927 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
CRTC3-210ENST00000560927 SLIT3O75094 1523 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms