RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 BTAF1O14981 1849 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 TMEM92Q6UXU6 159 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 ZNF784Q8NCA9 323 aaPredicted RBP9.27□□□□□ -0.93
USP8-213ENST00000560885 SYT17Q9BSW7 474 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 MTFR1LQ9H019 292 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 CEP350Q5VT06 3117 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 EVC2Q86UK5 1308 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 TTC21AQ8NDW8 1320 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 PAPPAQ13219 1627 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 TNS2Q63HR2 1409 aa9.26□□□□□ -0.93
USP8-213ENST00000560885 FHDC1Q9C0D6 1143 aaPredicted RBP9.26□□□□□ -0.93
USP8-213ENST00000560885 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
USP8-213ENST00000560885 COL24A1Q17RW2 1714 aa9.25□□□□□ -0.93
USP8-213ENST00000560885 CSB-PGBD3P0DP91 1061 aa9.25□□□□□ -0.93
USP8-213ENST00000560885 MAP3K5Q99683 1374 aa9.24□□□□□ -0.93
USP8-213ENST00000560885 KAT6BQ8WYB5 2073 aa9.24□□□□□ -0.93
USP8-213ENST00000560885 PBX2P40425 430 aa9.24□□□□□ -0.93
USP8-213ENST00000560885 IFNLR1Q8IU57 520 aaPredicted RBP9.24□□□□□ -0.93
USP8-213ENST00000560885 FAM208AQ9UK61 1670 aaKnown RBP9.23□□□□□ -0.93
USP8-213ENST00000560885 ZNF316A6NFI3 1004 aaPredicted RBP9.23□□□□□ -0.93
USP8-213ENST00000560885 ARXQ96QS3 562 aa9.23□□□□□ -0.93
USP8-213ENST00000560885 KTN1Q86UP2 1357 aaKnown RBP9.23□□□□□ -0.93
USP8-213ENST00000560885 LSM11P83369 360 aaKnown RBP eCLIP9.22□□□□□ -0.93
USP8-213ENST00000560885 TUBGCP6Q96RT7 1819 aa9.21□□□□□ -0.93
USP8-213ENST00000560885 C1QTNF8P60827 252 aa9.21□□□□□ -0.94
USP8-213ENST00000560885 USP31Q70CQ4 1352 aa9.21□□□□□ -0.94
USP8-213ENST00000560885 LY75O60449 1722 aa9.2□□□□□ -0.94
USP8-213ENST00000560885 SENP3-EIF4A1A0A087X0R7 540 aa9.2□□□□□ -0.94
USP8-213ENST00000560885 IL2RBP14784 551 aa9.2□□□□□ -0.94
USP8-213ENST00000560885 ANKRD13DQ6ZTN6 518 aa9.2□□□□□ -0.94
USP8-213ENST00000560885 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
USP8-213ENST00000560885 L3MBTL2Q969R5 705 aa9.2□□□□□ -0.94
USP8-213ENST00000560885 ACSBG1Q96GR2 724 aa9.2□□□□□ -0.94
USP8-213ENST00000560885 NLRP2Q9NX02 1062 aa9.2□□□□□ -0.94
USP8-213ENST00000560885 ARSIQ5FYB1 569 aa9.19□□□□□ -0.94
USP8-213ENST00000560885 ROCK2O75116 1388 aaKnown RBP9.19□□□□□ -0.94
USP8-213ENST00000560885 SBNO2Q9Y2G9 1366 aa9.19□□□□□ -0.94
USP8-213ENST00000560885 GPR162Q16538 588 aa9.18□□□□□ -0.94
USP8-213ENST00000560885 ZNF827Q17R98 1081 aa9.18□□□□□ -0.94
USP8-213ENST00000560885 SLC27A3Q5K4L6 730 aa9.18□□□□□ -0.94
USP8-213ENST00000560885 DOT1LQ8TEK3 1739 aa9.18□□□□□ -0.94
USP8-213ENST00000560885 MS4A4AQ96JQ5 239 aa9.18□□□□□ -0.94
USP8-213ENST00000560885 LRRC4BQ9NT99 713 aa9.18□□□□□ -0.94
USP8-213ENST00000560885 CD163L1Q9NR16 1453 aa9.17□□□□□ -0.94
USP8-213ENST00000560885 POLD1P28340 1107 aa9.17□□□□□ -0.94
USP8-213ENST00000560885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP8-213ENST00000560885 ANKRD24Q8TF21 1146 aa9.17□□□□□ -0.94
USP8-213ENST00000560885 SHANK3Q9BYB0 1731 aa9.17□□□□□ -0.94
USP8-213ENST00000560885 EDC4Q6P2E9 1401 aaKnown RBP9.16□□□□□ -0.94
USP8-213ENST00000560885 RGPD2P0DJD1 1756 aa9.16□□□□□ -0.94
USP8-213ENST00000560885 PNPLA7Q6ZV29 1317 aa9.15□□□□□ -0.94
USP8-213ENST00000560885 RIOK3O14730 519 aaKnown RBP9.15□□□□□ -0.94
USP8-213ENST00000560885 GIGYF1O75420 1035 aaPredicted RBP9.15□□□□□ -0.94
USP8-213ENST00000560885 HDGFL2Q7Z4V5 671 aaPredicted RBP9.15□□□□□ -0.94
USP8-213ENST00000560885 NME9Q86XW9 330 aa9.15□□□□□ -0.94
USP8-213ENST00000560885 ANKRD36BQ8N2N9 1353 aa9.14□□□□□ -0.95
USP8-213ENST00000560885 C5P01031 1676 aa9.14□□□□□ -0.95
USP8-213ENST00000560885 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
USP8-213ENST00000560885 IP6K1Q92551 441 aa9.14□□□□□ -0.95
USP8-213ENST00000560885 TERF2IPQ9NYB0 399 aa9.14□□□□□ -0.95
USP8-213ENST00000560885 TFCP2L1Q9NZI6 479 aa9.14□□□□□ -0.95
USP8-213ENST00000560885 HCSTQ9UBK5 93 aa9.14□□□□□ -0.95
USP8-213ENST00000560885 TAF1LQ8IZX4 1826 aa9.14□□□□□ -0.95
USP8-213ENST00000560885 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
USP8-213ENST00000560885 GRIN3BO60391 1043 aa9.12□□□□□ -0.95
USP8-213ENST00000560885 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
USP8-213ENST00000560885 NLGN2Q8NFZ4 835 aa9.12□□□□□ -0.95
USP8-213ENST00000560885 TMC1Q8TDI8 760 aa9.12□□□□□ -0.95
USP8-213ENST00000560885 SYTL4Q96C24 671 aaPredicted RBP9.12□□□□□ -0.95
USP8-213ENST00000560885 PUS7Q96PZ0 661 aaKnown RBP9.12□□□□□ -0.95
USP8-213ENST00000560885 SIN3AQ96ST3 1273 aa9.12□□□□□ -0.95
USP8-213ENST00000560885 SLC12A5Q9H2X9 1139 aa9.12□□□□□ -0.95
USP8-213ENST00000560885 A0A1W2PP64 1363 aa9.12□□□□□ -0.95
USP8-213ENST00000560885 NSD2O96028 1365 aa9.12□□□□□ -0.95
USP8-213ENST00000560885 HMGB2P26583 209 aaKnown RBP9.11□□□□□ -0.95
USP8-213ENST00000560885 NEUROD1Q13562 356 aa9.11□□□□□ -0.95
USP8-213ENST00000560885 IFFO2Q5TF58 517 aa9.11□□□□□ -0.95
USP8-213ENST00000560885 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.1□□□□□ -0.95
USP8-213ENST00000560885 KCNQ4P56696 695 aa9.1□□□□□ -0.95
USP8-213ENST00000560885 ZCRB1Q8TBF4 217 aaKnown RBP9.1□□□□□ -0.95
USP8-213ENST00000560885 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
USP8-213ENST00000560885 CARD11Q9BXL7 1154 aa9.1□□□□□ -0.95
USP8-213ENST00000560885 CCNL1Q9UK58 526 aaPredicted RBP9.1□□□□□ -0.95
USP8-213ENST00000560885 USP47Q96K76 1375 aa9.1□□□□□ -0.95
USP8-213ENST00000560885 ITGB4P16144 1822 aa9.1□□□□□ -0.95
USP8-213ENST00000560885 CGNL1Q0VF96 1302 aa9.09□□□□□ -0.95
USP8-213ENST00000560885 YBX3P16989 372 aaKnown RBP eCLIP9.09□□□□□ -0.95
USP8-213ENST00000560885 HOXC9P31274 260 aa9.09□□□□□ -0.95
USP8-213ENST00000560885 LTV1Q96GA3 475 aaPredicted RBP9.09□□□□□ -0.95
USP8-213ENST00000560885 MEGF6O75095 1541 aa9.09□□□□□ -0.95
USP8-213ENST00000560885 MAP3K19Q56UN5 1328 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 SLC34A2O95436 690 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 AMPHP49418 695 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 COL23A1Q86Y22 540 aaPredicted RBP9.08□□□□□ -0.96
USP8-213ENST00000560885 FLAD1Q8NFF5 587 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 COG3Q96JB2 828 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 TAOK2Q9UL54 1235 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 CD2APQ9Y5K6 639 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 RTL1A6NKG5 1358 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 UBR3Q6ZT12 1888 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms