RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
ALDH1A3-206ENST00000560555 ADAMTS7Q9UKP4 1686 aa16.35■□□□□ 0.21
ALDH1A3-206ENST00000560555 LGR6Q9HBX8 967 aa16.35■□□□□ 0.21
ALDH1A3-206ENST00000560555 SCN11AQ9UI33 1791 aa16.35■□□□□ 0.21
ALDH1A3-206ENST00000560555 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
ALDH1A3-206ENST00000560555 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
ALDH1A3-206ENST00000560555 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
ALDH1A3-206ENST00000560555 MYBBP1AQ9BQG0 1328 aaKnown RBP16.34■□□□□ 0.21
ALDH1A3-206ENST00000560555 KCNQ4P56696 695 aa16.33■□□□□ 0.2
ALDH1A3-206ENST00000560555 MPRIPQ6WCQ1 1025 aa16.33■□□□□ 0.2
ALDH1A3-206ENST00000560555 PAPPAQ13219 1627 aa16.33■□□□□ 0.2
ALDH1A3-206ENST00000560555 FCHSD2O94868 740 aa16.32■□□□□ 0.2
ALDH1A3-206ENST00000560555 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
ALDH1A3-206ENST00000560555 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
ALDH1A3-206ENST00000560555 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
ALDH1A3-206ENST00000560555 PNPLA7Q6ZV29 1317 aa16.32■□□□□ 0.2
ALDH1A3-206ENST00000560555 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
ALDH1A3-206ENST00000560555 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
ALDH1A3-206ENST00000560555 IL17REQ8NFR9 667 aa16.31■□□□□ 0.2
ALDH1A3-206ENST00000560555 DCAF5Q96JK2 942 aa16.31■□□□□ 0.2
ALDH1A3-206ENST00000560555 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
ALDH1A3-206ENST00000560555 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
ALDH1A3-206ENST00000560555 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
ALDH1A3-206ENST00000560555 ATG3Q9NT62 314 aa16.3■□□□□ 0.2
ALDH1A3-206ENST00000560555 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
ALDH1A3-206ENST00000560555 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
ALDH1A3-206ENST00000560555 GOLGB1Q14789 3259 aaKnown RBP16.3■□□□□ 0.2
ALDH1A3-206ENST00000560555 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
ALDH1A3-206ENST00000560555 NUDCQ9Y266 331 aa16.29■□□□□ 0.2
ALDH1A3-206ENST00000560555 DLG5Q8TDM6 1919 aa16.28■□□□□ 0.2
ALDH1A3-206ENST00000560555 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
ALDH1A3-206ENST00000560555 NFATC2IPQ8NCF5 419 aa16.28■□□□□ 0.2
ALDH1A3-206ENST00000560555 TAF1LQ8IZX4 1826 aa16.28■□□□□ 0.2
ALDH1A3-206ENST00000560555 ADCY9O60503 1353 aa16.26■□□□□ 0.19
ALDH1A3-206ENST00000560555 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
ALDH1A3-206ENST00000560555 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
ALDH1A3-206ENST00000560555 DNAJC5GQ8N7S2 189 aa16.26■□□□□ 0.19
ALDH1A3-206ENST00000560555 MRC1P22897 1456 aa16.25■□□□□ 0.19
ALDH1A3-206ENST00000560555 KIF3CO14782 793 aa16.25■□□□□ 0.19
ALDH1A3-206ENST00000560555 APLP1P51693 650 aa16.25■□□□□ 0.19
ALDH1A3-206ENST00000560555 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
ALDH1A3-206ENST00000560555 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
ALDH1A3-206ENST00000560555 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
ALDH1A3-206ENST00000560555 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
ALDH1A3-206ENST00000560555 ITPK1Q13572 414 aa16.24■□□□□ 0.19
ALDH1A3-206ENST00000560555 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
ALDH1A3-206ENST00000560555 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
ALDH1A3-206ENST00000560555 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
ALDH1A3-206ENST00000560555 CABP4P57796 275 aa16.23■□□□□ 0.19
ALDH1A3-206ENST00000560555 AMIGO3Q86WK7 504 aa16.23■□□□□ 0.19
ALDH1A3-206ENST00000560555 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
ALDH1A3-206ENST00000560555 GNAT3A8MTJ3 354 aa16.22■□□□□ 0.19
ALDH1A3-206ENST00000560555 CAPN15O75808 1086 aa16.22■□□□□ 0.19
ALDH1A3-206ENST00000560555 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
ALDH1A3-206ENST00000560555 COL13A1Q5TAT6 717 aaPredicted RBP16.22■□□□□ 0.19
ALDH1A3-206ENST00000560555 CD2APQ9Y5K6 639 aa16.22■□□□□ 0.19
ALDH1A3-206ENST00000560555 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
ALDH1A3-206ENST00000560555 COL24A1Q17RW2 1714 aa16.22■□□□□ 0.19
ALDH1A3-206ENST00000560555 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
ALDH1A3-206ENST00000560555 MSH5O43196 834 aa16.21■□□□□ 0.19
ALDH1A3-206ENST00000560555 SIK1P57059 783 aa16.21■□□□□ 0.19
ALDH1A3-206ENST00000560555 CCNL1Q9UK58 526 aaPredicted RBP16.21■□□□□ 0.19
ALDH1A3-206ENST00000560555 SLC39A6Q13433 755 aa16.2■□□□□ 0.18
ALDH1A3-206ENST00000560555 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
ALDH1A3-206ENST00000560555 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
ALDH1A3-206ENST00000560555 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
ALDH1A3-206ENST00000560555 SMARCC1Q92922 1105 aaPredicted RBP16.2■□□□□ 0.18
ALDH1A3-206ENST00000560555 C5P01031 1676 aa16.2■□□□□ 0.18
ALDH1A3-206ENST00000560555 ZNF831Q5JPB2 1677 aa16.2■□□□□ 0.18
ALDH1A3-206ENST00000560555 KCNQ3O43525 872 aa16.19■□□□□ 0.18
ALDH1A3-206ENST00000560555 MSL1Q68DK7 614 aa16.19■□□□□ 0.18
ALDH1A3-206ENST00000560555 MCM10Q7L590 875 aa16.19■□□□□ 0.18
ALDH1A3-206ENST00000560555 LINC00116Q8NCU8 138 aa16.19■□□□□ 0.18
ALDH1A3-206ENST00000560555 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
ALDH1A3-206ENST00000560555 NFE2L2Q16236 605 aa16.18■□□□□ 0.18
ALDH1A3-206ENST00000560555 CCDC146Q8IYE0 955 aa16.18■□□□□ 0.18
ALDH1A3-206ENST00000560555 COL5A3P25940 1745 aaPredicted RBP16.18■□□□□ 0.18
ALDH1A3-206ENST00000560555 QSER1Q2KHR3 1735 aa16.18■□□□□ 0.18
ALDH1A3-206ENST00000560555 KCPQ6ZWJ8 1503 aa16.18■□□□□ 0.18
ALDH1A3-206ENST00000560555 C4BP0C0L5 1744 aa16.17■□□□□ 0.18
ALDH1A3-206ENST00000560555 TJP1Q07157 1748 aa16.17■□□□□ 0.18
ALDH1A3-206ENST00000560555 TMPOP42166 694 aaKnown RBP16.17■□□□□ 0.18
ALDH1A3-206ENST00000560555 THUMPD2Q9BTF0 503 aaKnown RBP16.17■□□□□ 0.18
ALDH1A3-206ENST00000560555 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
ALDH1A3-206ENST00000560555 ANP32CO43423 234 aa16.16■□□□□ 0.18
ALDH1A3-206ENST00000560555 HTATSF1O43719 755 aaKnown RBP16.16■□□□□ 0.18
ALDH1A3-206ENST00000560555 PRELPP51888 382 aa16.16■□□□□ 0.18
ALDH1A3-206ENST00000560555 CICQ96RK0 1608 aaPredicted RBP16.16■□□□□ 0.18
ALDH1A3-206ENST00000560555 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
ALDH1A3-206ENST00000560555 TOMM70O94826 608 aa16.15■□□□□ 0.18
ALDH1A3-206ENST00000560555 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
ALDH1A3-206ENST00000560555 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
ALDH1A3-206ENST00000560555 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
ALDH1A3-206ENST00000560555 TNS4Q8IZW8 715 aa16.13■□□□□ 0.17
ALDH1A3-206ENST00000560555 ZNF496Q96IT1 587 aaPredicted RBP16.13■□□□□ 0.17
ALDH1A3-206ENST00000560555 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
ALDH1A3-206ENST00000560555 WWC3Q9ULE0 1092 aa16.13■□□□□ 0.17
ALDH1A3-206ENST00000560555 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
ALDH1A3-206ENST00000560555 RIPK4P57078 832 aa16.12■□□□□ 0.17
ALDH1A3-206ENST00000560555 ZNF790Q6PG37 636 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms