RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 ZBTB40Q9NUA8 1239 aa13.81□□□□□ -0.2
SNRPA1-211ENST00000560433 ZBTB7BO15156 539 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-211ENST00000560433 SPG7Q9UQ90 795 aa13.8□□□□□ -0.2
SNRPA1-211ENST00000560433 ABCC4O15439 1325 aa13.8□□□□□ -0.2
SNRPA1-211ENST00000560433 NUTM2BA6NNL0 878 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-211ENST00000560433 NUTM2EB1AL46 878 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-211ENST00000560433 HDGFL1Q5TGJ6 251 aa13.8□□□□□ -0.2
SNRPA1-211ENST00000560433 NUTM2AQ8IVF1 878 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-211ENST00000560433 PHAXQ9H814 394 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-211ENST00000560433 DDX54Q8TDD1 881 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-211ENST00000560433 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
SNRPA1-211ENST00000560433 API5Q9BZZ5 524 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-211ENST00000560433 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
SNRPA1-211ENST00000560433 BCL11AQ9H165 835 aa13.79□□□□□ -0.2
SNRPA1-211ENST00000560433 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-211ENST00000560433 CCDC30Q5VVM6 783 aa13.78□□□□□ -0.2
SNRPA1-211ENST00000560433 RGS12O14924 1447 aa13.78□□□□□ -0.2
SNRPA1-211ENST00000560433 FKBP5Q13451 457 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-211ENST00000560433 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
SNRPA1-211ENST00000560433 FLIIQ13045 1269 aa13.76□□□□□ -0.21
SNRPA1-211ENST00000560433 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-211ENST00000560433 UBAP1LF5GYI3 381 aa13.76□□□□□ -0.21
SNRPA1-211ENST00000560433 CERKQ8TCT0 537 aa13.76□□□□□ -0.21
SNRPA1-211ENST00000560433 SLC52A2Q9HAB3 445 aa13.76□□□□□ -0.21
SNRPA1-211ENST00000560433 IL2RBP14784 551 aa13.75□□□□□ -0.21
SNRPA1-211ENST00000560433 ZCRB1Q8TBF4 217 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-211ENST00000560433 TOM1O60784 492 aa13.75□□□□□ -0.21
SNRPA1-211ENST00000560433 CARD10Q9BWT7 1032 aa13.75□□□□□ -0.21
SNRPA1-211ENST00000560433 BABAM1Q9NWV8 329 aa13.75□□□□□ -0.21
SNRPA1-211ENST00000560433 PDZRN3Q9UPQ7 1066 aa13.75□□□□□ -0.21
SNRPA1-211ENST00000560433 PIP4K2AP48426 406 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-211ENST00000560433 MEIS3Q99687 375 aa13.74□□□□□ -0.21
SNRPA1-211ENST00000560433 PTPRCP08575 1304 aa13.74□□□□□ -0.21
SNRPA1-211ENST00000560433 KDM3BQ7LBC6 1761 aa13.74□□□□□ -0.21
SNRPA1-211ENST00000560433 GIGYF1O75420 1035 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-211ENST00000560433 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
SNRPA1-211ENST00000560433 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
SNRPA1-211ENST00000560433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNRPA1-211ENST00000560433 AAMPQ13685 434 aa13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 DCAF5Q96JK2 942 aa13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 ABCC6O95255 1503 aa13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 PDE4AP27815 886 aa13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 CABP4P57796 275 aa13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 INTS3Q68E01 1043 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 PHLPP1O60346 1717 aa13.73□□□□□ -0.21
SNRPA1-211ENST00000560433 ZNF496Q96IT1 587 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-211ENST00000560433 AHDC1Q5TGY3 1603 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-211ENST00000560433 SCN11AQ9UI33 1791 aa13.72□□□□□ -0.21
SNRPA1-211ENST00000560433 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
SNRPA1-211ENST00000560433 AIMP1Q12904 312 aaKnown RBP13.71□□□□□ -0.22
SNRPA1-211ENST00000560433 HDAC1Q13547 482 aaPredicted RBP13.71□□□□□ -0.22
SNRPA1-211ENST00000560433 PCDH11XQ9BZA7 1347 aa13.71□□□□□ -0.22
SNRPA1-211ENST00000560433 PCDH11YQ9BZA8 1340 aa13.71□□□□□ -0.22
SNRPA1-211ENST00000560433 SIPA1L3O60292 1781 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-211ENST00000560433 MYL6BP14649 208 aa13.7□□□□□ -0.22
SNRPA1-211ENST00000560433 NPM2Q86SE8 214 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-211ENST00000560433 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
SNRPA1-211ENST00000560433 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
SNRPA1-211ENST00000560433 PKD1L3Q7Z443 1732 aa13.69□□□□□ -0.22
SNRPA1-211ENST00000560433 COL16A1Q07092 1604 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-211ENST00000560433 PI4KAP2A4QPH2 592 aa13.69□□□□□ -0.22
SNRPA1-211ENST00000560433 PI4KAP1Q8N8J0 262 aa13.69□□□□□ -0.22
SNRPA1-211ENST00000560433 BACH2Q9BYV9 841 aa13.69□□□□□ -0.22
SNRPA1-211ENST00000560433 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
SNRPA1-211ENST00000560433 APBB1O00213 710 aa13.68□□□□□ -0.22
SNRPA1-211ENST00000560433 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-211ENST00000560433 ADAMTS7Q9UKP4 1686 aa13.68□□□□□ -0.22
SNRPA1-211ENST00000560433 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-211ENST00000560433 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-211ENST00000560433 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-211ENST00000560433 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
SNRPA1-211ENST00000560433 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
SNRPA1-211ENST00000560433 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-211ENST00000560433 HOXB7P09629 217 aa13.66□□□□□ -0.22
SNRPA1-211ENST00000560433 CCT4P50991 539 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-211ENST00000560433 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
SNRPA1-211ENST00000560433 A0A0G2JS52 829 aa13.66□□□□□ -0.22
SNRPA1-211ENST00000560433 PDIA6Q15084 440 aa13.66□□□□□ -0.22
SNRPA1-211ENST00000560433 SOS1Q07889 1333 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-211ENST00000560433 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 CHMP4BQ9H444 224 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 COL14A1Q05707 1796 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 C5P01031 1676 aa13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 SYTL4Q96C24 671 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 MAP3K2Q9Y2U5 619 aa13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 SHANK3Q9BYB0 1731 aa13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 COL22A1Q8NFW1 1626 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-211ENST00000560433 FMNL2Q96PY5 1086 aa13.64□□□□□ -0.23
SNRPA1-211ENST00000560433 ADCY9O60503 1353 aa13.64□□□□□ -0.23
SNRPA1-211ENST00000560433 FBXO41Q8TF61 875 aa13.64□□□□□ -0.23
SNRPA1-211ENST00000560433 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
SNRPA1-211ENST00000560433 USP44Q9H0E7 712 aa13.64□□□□□ -0.23
SNRPA1-211ENST00000560433 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
SNRPA1-211ENST00000560433 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-211ENST00000560433 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-211ENST00000560433 ATP10DQ9P241 1426 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms