RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
TRAF3-208ENST00000560371 MAP3K12Q12852 859 aa15.86■□□□□ 0.13
TRAF3-208ENST00000560371 ACBD3Q9H3P7 528 aa15.86■□□□□ 0.13
TRAF3-208ENST00000560371 ABCC5O15440 1437 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 WASF1Q92558 559 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 TOM1O60784 492 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 PDRG1Q9NUG6 133 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 DACH1Q9UI36 760 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 MATR3P43243 847 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRAF3-208ENST00000560371 TEX13AQ9BXU3 409 aaPredicted RBP15.85■□□□□ 0.13
TRAF3-208ENST00000560371 BOLA2Q9H3K6 86 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 SERPINC1P01008 464 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 TANGO6Q9C0B7 1094 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 SLC5A1P13866 664 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 GPTP24298 496 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 HSP90AA2PQ14568 343 aaPredicted RBP15.85■□□□□ 0.13
TRAF3-208ENST00000560371 NFKBIBQ15653 356 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 SLF2Q8IX21 1173 aa15.85■□□□□ 0.13
TRAF3-208ENST00000560371 C6orf229H3BNL8 230 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 NUTM1Q86Y26 1132 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 EMILIN1Q9Y6C2 1016 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 A0A087WZG4 1122 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 HSP90B2PQ58FF3 399 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 ABCC11Q96J66 1382 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 UBAP1LF5GYI3 381 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 IFNL2Q8IZJ0 200 aa15.84■□□□□ 0.13
TRAF3-208ENST00000560371 ANKRD18BA2A2Z9 1011 aa15.83■□□□□ 0.13
TRAF3-208ENST00000560371 RFC4P35249 363 aa15.83■□□□□ 0.13
TRAF3-208ENST00000560371 SLFN5Q08AF3 891 aa15.83■□□□□ 0.13
TRAF3-208ENST00000560371 TNMDQ9H2S6 317 aa15.83■□□□□ 0.13
TRAF3-208ENST00000560371 VSIG10Q8N0Z9 540 aa15.83■□□□□ 0.12
TRAF3-208ENST00000560371 BCL11BQ9C0K0 894 aaPredicted RBP15.83■□□□□ 0.12
TRAF3-208ENST00000560371 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
TRAF3-208ENST00000560371 K7ELQ4 463 aaPredicted RBP15.83■□□□□ 0.12
TRAF3-208ENST00000560371 DEF6Q9H4E7 631 aa15.83■□□□□ 0.12
TRAF3-208ENST00000560371 NOS1P29475 1434 aa15.83■□□□□ 0.12
TRAF3-208ENST00000560371 ZNF444Q8N0Y2 327 aaPredicted RBP15.83■□□□□ 0.12
TRAF3-208ENST00000560371 TSPY26PQ9H489 355 aa15.83■□□□□ 0.12
TRAF3-208ENST00000560371 CASTP20810 708 aaKnown RBP15.82■□□□□ 0.12
TRAF3-208ENST00000560371 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
TRAF3-208ENST00000560371 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
TRAF3-208ENST00000560371 TNIP1Q15025 636 aa15.82■□□□□ 0.12
TRAF3-208ENST00000560371 CCDC192P0DO97 292 aa15.82■□□□□ 0.12
TRAF3-208ENST00000560371 NCOA1Q15788 1441 aa15.82■□□□□ 0.12
TRAF3-208ENST00000560371 IQCA1Q86XH1 822 aa15.82■□□□□ 0.12
TRAF3-208ENST00000560371 ALDH1L2Q3SY69 923 aa15.82■□□□□ 0.12
TRAF3-208ENST00000560371 WDR78Q5VTH9 848 aa15.82■□□□□ 0.12
TRAF3-208ENST00000560371 DNAAF4Q8WXU2 420 aa15.82■□□□□ 0.12
TRAF3-208ENST00000560371 CDC5LQ99459 802 aaKnown RBP15.82■□□□□ 0.12
TRAF3-208ENST00000560371 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
TRAF3-208ENST00000560371 TNRQ92752 1358 aa15.82■□□□□ 0.12
TRAF3-208ENST00000560371 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
TRAF3-208ENST00000560371 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.81■□□□□ 0.12
TRAF3-208ENST00000560371 SSH1Q8WYL5 1049 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 URB2Q14146 1524 aaKnown RBP15.81■□□□□ 0.12
TRAF3-208ENST00000560371 CCDC196A0A1B0GTZ2 297 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 PPFIBP1Q86W92 1011 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 CCDC39Q9UFE4 941 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 TEX14Q8IWB6 1497 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 CHRNA2Q15822 529 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 MRE11P49959 708 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 DDX46Q7L014 1031 aaKnown RBP15.81■□□□□ 0.12
TRAF3-208ENST00000560371 ZBTB3Q9H5J0 574 aa15.81■□□□□ 0.12
TRAF3-208ENST00000560371 PDIA4P13667 645 aaKnown RBP15.8■□□□□ 0.12
TRAF3-208ENST00000560371 CTTNBP2Q8WZ74 1663 aa15.8■□□□□ 0.12
TRAF3-208ENST00000560371 KDM5BQ9UGL1 1544 aa15.8■□□□□ 0.12
TRAF3-208ENST00000560371 IBSPP21815 317 aaPredicted RBP15.8■□□□□ 0.12
TRAF3-208ENST00000560371 ACEP12821 1306 aa15.8■□□□□ 0.12
TRAF3-208ENST00000560371 F6X3S4 739 aa15.8■□□□□ 0.12
TRAF3-208ENST00000560371 RAPGEF6Q8TEU7 1601 aa15.8■□□□□ 0.12
TRAF3-208ENST00000560371 CEP57L1Q8IYX8 460 aa15.8■□□□□ 0.12
TRAF3-208ENST00000560371 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
TRAF3-208ENST00000560371 CCP110O43303 1012 aa15.79■□□□□ 0.12
TRAF3-208ENST00000560371 MX1P20591 662 aa15.79■□□□□ 0.12
TRAF3-208ENST00000560371 ANKRD24Q8TF21 1146 aa15.79■□□□□ 0.12
TRAF3-208ENST00000560371 SPATA32Q96LK8 384 aa15.79■□□□□ 0.12
TRAF3-208ENST00000560371 RANBP6O60518 1105 aaKnown RBP15.79■□□□□ 0.12
TRAF3-208ENST00000560371 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
TRAF3-208ENST00000560371 CHMP4BP1P59074 171 aa15.79■□□□□ 0.12
TRAF3-208ENST00000560371 LRRFIP2Q9Y608 721 aaKnown RBP15.79■□□□□ 0.12
TRAF3-208ENST00000560371 TRIM21P19474 475 aaKnown RBP15.78■□□□□ 0.12
TRAF3-208ENST00000560371 LDHAL6AQ6ZMR3 332 aa15.78■□□□□ 0.12
TRAF3-208ENST00000560371 NOM1Q5C9Z4 860 aaKnown RBP15.78■□□□□ 0.12
TRAF3-208ENST00000560371 CTCFLQ8NI51 663 aaPredicted RBP15.78■□□□□ 0.12
TRAF3-208ENST00000560371 CWC25Q9NXE8 425 aaPredicted RBP15.78■□□□□ 0.12
TRAF3-208ENST00000560371 NPHP3Q7Z494 1330 aa15.78■□□□□ 0.12
TRAF3-208ENST00000560371 DDX11Q96FC9 970 aa15.78■□□□□ 0.12
TRAF3-208ENST00000560371 RSPH6AQ9H0K4 717 aa15.78■□□□□ 0.12
TRAF3-208ENST00000560371 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
TRAF3-208ENST00000560371 THOC2Q8NI27 1593 aaKnown RBP15.78■□□□□ 0.12
TRAF3-208ENST00000560371 CCDC96Q2M329 555 aa15.77■□□□□ 0.12
TRAF3-208ENST00000560371 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRAF3-208ENST00000560371 ZNF213O14771 459 aa15.77■□□□□ 0.12
TRAF3-208ENST00000560371 PTPRCP08575 1304 aa15.77■□□□□ 0.12
TRAF3-208ENST00000560371 DESP17661 470 aa15.77■□□□□ 0.12
TRAF3-208ENST00000560371 CCDC8Q9H0W5 538 aaPredicted RBP15.77■□□□□ 0.12
TRAF3-208ENST00000560371 MAP3K2Q9Y2U5 619 aa15.77■□□□□ 0.12
TRAF3-208ENST00000560371 SPC24Q8NBT2 197 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms