RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 PLEKHM2Q8IWE5 1019 aa10.06□□□□□ -0.8
SMAD3-212ENST00000559937 IL17REQ8NFR9 667 aa10.06□□□□□ -0.8
SMAD3-212ENST00000559937 C1orf167Q5SNV9 1468 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 FLIIQ13045 1269 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 AMOTQ4VCS5 1084 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 ESCO1Q5FWF5 840 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 TTC22Q5TAA0 569 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 C14orf37Q86TY3 774 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 MEIS3Q99687 375 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 STRCP1A6NGW2 1772 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 COL18A1P39060 1754 aa10.05□□□□□ -0.8
SMAD3-212ENST00000559937 GNAI2P04899 355 aa10.04□□□□□ -0.8
SMAD3-212ENST00000559937 PLEKHO1Q53GL0 409 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-212ENST00000559937 TBC1D9Q6ZT07 1266 aa10.04□□□□□ -0.8
SMAD3-212ENST00000559937 G2E3Q7L622 706 aa10.04□□□□□ -0.8
SMAD3-212ENST00000559937 ARHGEF25Q86VW2 580 aa10.04□□□□□ -0.8
SMAD3-212ENST00000559937 HSCBQ8IWL3 235 aa10.04□□□□□ -0.8
SMAD3-212ENST00000559937 MIS18AQ9NYP9 233 aa10.04□□□□□ -0.8
SMAD3-212ENST00000559937 AKAP4Q5JQC9 854 aa10.03□□□□□ -0.8
SMAD3-212ENST00000559937 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
SMAD3-212ENST00000559937 PKD1L3Q7Z443 1732 aa10.03□□□□□ -0.8
SMAD3-212ENST00000559937 LTV1Q96GA3 475 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-212ENST00000559937 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
SMAD3-212ENST00000559937 OSBPL3Q9H4L5 887 aa10.03□□□□□ -0.8
SMAD3-212ENST00000559937 CHMP5Q9NZZ3 219 aa10.03□□□□□ -0.8
SMAD3-212ENST00000559937 PARP4Q9UKK3 1724 aaKnown RBP10.02□□□□□ -0.8
SMAD3-212ENST00000559937 GCP02774 474 aa10.02□□□□□ -0.81
SMAD3-212ENST00000559937 GSPT1P15170 499 aaKnown RBP10.02□□□□□ -0.81
SMAD3-212ENST00000559937 PIP4K2BP78356 416 aa10.02□□□□□ -0.81
SMAD3-212ENST00000559937 GSE1Q14687 1217 aa10.02□□□□□ -0.81
SMAD3-212ENST00000559937 PROSER2Q86WR7 435 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-212ENST00000559937 XIRP1Q702N8 1843 aaKnown RBP10.01□□□□□ -0.81
SMAD3-212ENST00000559937 FRAT2O75474 233 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-212ENST00000559937 HSPA1LP34931 641 aa10.01□□□□□ -0.81
SMAD3-212ENST00000559937 EIF4A1P60842 406 aaKnown RBP10.01□□□□□ -0.81
SMAD3-212ENST00000559937 ATP8B2P98198 1209 aa10.01□□□□□ -0.81
SMAD3-212ENST00000559937 FKBP5Q13451 457 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-212ENST00000559937 HDGFL1Q5TGJ6 251 aa10.01□□□□□ -0.81
SMAD3-212ENST00000559937 ZNF530Q6P9A1 599 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-212ENST00000559937 CASC1Q6TDU7 716 aa10.01□□□□□ -0.81
SMAD3-212ENST00000559937 C19orf44Q9H6X5 657 aa10.01□□□□□ -0.81
SMAD3-212ENST00000559937 CIZ1Q9ULV3 898 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-212ENST00000559937 AOX1Q06278 1338 aa10.01□□□□□ -0.81
SMAD3-212ENST00000559937 HEG1Q9ULI3 1381 aa10.01□□□□□ -0.81
SMAD3-212ENST00000559937 PXDNQ92626 1479 aa10□□□□□ -0.81
SMAD3-212ENST00000559937 F6X3S4 739 aa10□□□□□ -0.81
SMAD3-212ENST00000559937 TEFQ10587 303 aa10□□□□□ -0.81
SMAD3-212ENST00000559937 SLC4A10Q6U841 1118 aa10□□□□□ -0.81
SMAD3-212ENST00000559937 KRT28Q7Z3Y7 464 aa10□□□□□ -0.81
SMAD3-212ENST00000559937 USHBP1Q8N6Y0 703 aa10□□□□□ -0.81
SMAD3-212ENST00000559937 ORAI2Q96SN7 254 aa10□□□□□ -0.81
SMAD3-212ENST00000559937 SLKQ9H2G2 1235 aaPredicted RBP10□□□□□ -0.81
SMAD3-212ENST00000559937 LAMB4A4D0S4 1761 aa10□□□□□ -0.81
SMAD3-212ENST00000559937 IBTKQ9P2D0 1353 aaPredicted RBP10□□□□□ -0.81
SMAD3-212ENST00000559937 RNMTO43148 476 aaKnown RBP9.99□□□□□ -0.81
SMAD3-212ENST00000559937 C1orf141Q5JVX7 400 aa9.99□□□□□ -0.81
SMAD3-212ENST00000559937 ILDR2Q71H61 639 aa9.99□□□□□ -0.81
SMAD3-212ENST00000559937 ANKRD24Q8TF21 1146 aa9.99□□□□□ -0.81
SMAD3-212ENST00000559937 KIF2CQ99661 725 aa9.99□□□□□ -0.81
SMAD3-212ENST00000559937 SRCIN1Q9C0H9 1055 aa9.99□□□□□ -0.81
SMAD3-212ENST00000559937 SALL3Q9BXA9 1300 aa9.99□□□□□ -0.81
SMAD3-212ENST00000559937 C5P01031 1676 aa9.99□□□□□ -0.81
SMAD3-212ENST00000559937 DDIT3P35638 169 aa9.98□□□□□ -0.81
SMAD3-212ENST00000559937 RABEP1Q15276 862 aa9.98□□□□□ -0.81
SMAD3-212ENST00000559937 IL27Q8NEV9 243 aa9.98□□□□□ -0.81
SMAD3-212ENST00000559937 HDAC5Q9UQL6 1122 aa9.98□□□□□ -0.81
SMAD3-212ENST00000559937 MRC1P22897 1456 aa9.98□□□□□ -0.81
SMAD3-212ENST00000559937 RAB11FIP3O75154 756 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 REC8O95072 547 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 UBTFL1P0CB47 393 aaPredicted RBP9.97□□□□□ -0.81
SMAD3-212ENST00000559937 SDSP20132 328 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 PDE1AP54750 535 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 SSH3Q8TE77 659 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 LRRCC1Q9C099 1032 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 USP44Q9H0E7 712 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 LGR6Q9HBX8 967 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 STAP2Q9UGK3 403 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 TNS3Q68CZ2 1445 aa9.97□□□□□ -0.81
SMAD3-212ENST00000559937 BTBD11A6QL63 1104 aa9.96□□□□□ -0.82
SMAD3-212ENST00000559937 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-212ENST00000559937 EPB41L2O43491 1005 aaKnown RBP9.96□□□□□ -0.82
SMAD3-212ENST00000559937 HSP90AB1P08238 724 aaKnown RBP9.96□□□□□ -0.82
SMAD3-212ENST00000559937 PTMSP20962 102 aa9.96□□□□□ -0.82
SMAD3-212ENST00000559937 POLA2Q14181 598 aa9.96□□□□□ -0.82
SMAD3-212ENST00000559937 C16orf71Q8IYS4 520 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-212ENST00000559937 DNAAF4Q8WXU2 420 aa9.96□□□□□ -0.82
SMAD3-212ENST00000559937 LRRC59Q96AG4 307 aaKnown RBP9.96□□□□□ -0.82
SMAD3-212ENST00000559937 RBM33Q96EV2 1170 aaKnown RBP9.96□□□□□ -0.82
SMAD3-212ENST00000559937 USP26Q9BXU7 913 aa9.96□□□□□ -0.82
SMAD3-212ENST00000559937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMAD3-212ENST00000559937 DBF4Q9UBU7 674 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-212ENST00000559937 ERBB3P21860 1342 aa9.96□□□□□ -0.82
SMAD3-212ENST00000559937 TMEM94Q12767 1356 aa9.96□□□□□ -0.82
SMAD3-212ENST00000559937 SMARCA5O60264 1052 aaPredicted RBP9.95□□□□□ -0.82
SMAD3-212ENST00000559937 ALDH1L1O75891 902 aa9.95□□□□□ -0.82
SMAD3-212ENST00000559937 ATF3P18847 181 aa9.95□□□□□ -0.82
SMAD3-212ENST00000559937 MCM4P33991 863 aa9.95□□□□□ -0.82
SMAD3-212ENST00000559937 HSP90AB4PQ58FF6 505 aa9.95□□□□□ -0.82
SMAD3-212ENST00000559937 OTUD7AQ8TE49 926 aaPredicted RBP9.95□□□□□ -0.82
SMAD3-212ENST00000559937 LRRFIP2Q9Y608 721 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms