RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
RABGGTA-211ENST00000559850 SRCAPQ6ZRS2 3230 aa19.89■□□□□ 0.77
RABGGTA-211ENST00000559850 LOC102724428A0A0B4J2F2 783 aa19.88■□□□□ 0.77
RABGGTA-211ENST00000559850 SIK1P57059 783 aa19.88■□□□□ 0.77
RABGGTA-211ENST00000559850 ITPK1Q13572 414 aa19.87■□□□□ 0.77
RABGGTA-211ENST00000559850 SMIM5Q71RC9 77 aa19.87■□□□□ 0.77
RABGGTA-211ENST00000559850 UBR3Q6ZT12 1888 aa19.87■□□□□ 0.77
RABGGTA-211ENST00000559850 RNMTO43148 476 aaKnown RBP19.86■□□□□ 0.77
RABGGTA-211ENST00000559850 LINC00116Q8NCU8 138 aa19.86■□□□□ 0.77
RABGGTA-211ENST00000559850 RBM42Q9BTD8 480 aaKnown RBP19.86■□□□□ 0.77
RABGGTA-211ENST00000559850 COL5A3P25940 1745 aaPredicted RBP19.85■□□□□ 0.77
RABGGTA-211ENST00000559850 ATP6V1AP38606 617 aa19.85■□□□□ 0.77
RABGGTA-211ENST00000559850 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
RABGGTA-211ENST00000559850 MRC1P22897 1456 aa19.85■□□□□ 0.77
RABGGTA-211ENST00000559850 TJP1Q07157 1748 aa19.85■□□□□ 0.77
RABGGTA-211ENST00000559850 MSH5O43196 834 aa19.84■□□□□ 0.77
RABGGTA-211ENST00000559850 RALBP1Q15311 655 aa19.84■□□□□ 0.77
RABGGTA-211ENST00000559850 AMIGO3Q86WK7 504 aa19.84■□□□□ 0.77
RABGGTA-211ENST00000559850 SIPA1L3O60292 1781 aaPredicted RBP19.84■□□□□ 0.77
RABGGTA-211ENST00000559850 DLG5Q8TDM6 1919 aa19.84■□□□□ 0.77
RABGGTA-211ENST00000559850 MAP3K5Q99683 1374 aa19.83■□□□□ 0.77
RABGGTA-211ENST00000559850 PTCD1O75127 700 aaKnown RBP19.83■□□□□ 0.77
RABGGTA-211ENST00000559850 COL23A1Q86Y22 540 aaPredicted RBP19.83■□□□□ 0.77
RABGGTA-211ENST00000559850 PPP1R1BQ9UD71 204 aaPredicted RBP19.83■□□□□ 0.77
RABGGTA-211ENST00000559850 ZNF831Q5JPB2 1677 aa19.83■□□□□ 0.76
RABGGTA-211ENST00000559850 PTGER2P43116 358 aa19.82■□□□□ 0.76
RABGGTA-211ENST00000559850 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
RABGGTA-211ENST00000559850 MTFR1LQ9H019 292 aa19.82■□□□□ 0.76
RABGGTA-211ENST00000559850 SLC52A2Q9HAB3 445 aa19.82■□□□□ 0.76
RABGGTA-211ENST00000559850 PHF14O94880 888 aa19.81■□□□□ 0.76
RABGGTA-211ENST00000559850 SLC39A6Q13433 755 aa19.81■□□□□ 0.76
RABGGTA-211ENST00000559850 AK7Q96M32 723 aa19.81■□□□□ 0.76
RABGGTA-211ENST00000559850 COL24A1Q17RW2 1714 aa19.81■□□□□ 0.76
RABGGTA-211ENST00000559850 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
RABGGTA-211ENST00000559850 GNAT3A8MTJ3 354 aa19.8■□□□□ 0.76
RABGGTA-211ENST00000559850 FCHSD2O94868 740 aa19.8■□□□□ 0.76
RABGGTA-211ENST00000559850 IL17REQ8NFR9 667 aa19.8■□□□□ 0.76
RABGGTA-211ENST00000559850 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
RABGGTA-211ENST00000559850 UBR2Q8IWV8 1755 aa19.79■□□□□ 0.76
RABGGTA-211ENST00000559850 MYH14Q7Z406 1995 aaKnown RBP19.79■□□□□ 0.76
RABGGTA-211ENST00000559850 KCPQ6ZWJ8 1503 aa19.78■□□□□ 0.76
RABGGTA-211ENST00000559850 MSL1Q68DK7 614 aa19.78■□□□□ 0.76
RABGGTA-211ENST00000559850 SGIP1Q9BQI5 828 aa19.78■□□□□ 0.76
RABGGTA-211ENST00000559850 GNPATO15228 680 aa19.77■□□□□ 0.76
RABGGTA-211ENST00000559850 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.76■□□□□ 0.75
RABGGTA-211ENST00000559850 PRKRIP1Q9H875 184 aaPredicted RBP19.76■□□□□ 0.75
RABGGTA-211ENST00000559850 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
RABGGTA-211ENST00000559850 TEFQ10587 303 aa19.75■□□□□ 0.75
RABGGTA-211ENST00000559850 DCTN1Q14203 1278 aa19.75■□□□□ 0.75
RABGGTA-211ENST00000559850 MCM10Q7L590 875 aa19.75■□□□□ 0.75
RABGGTA-211ENST00000559850 C4AP0C0L4 1744 aa19.74■□□□□ 0.75
RABGGTA-211ENST00000559850 SLC16A10Q8TF71 515 aa19.74■□□□□ 0.75
RABGGTA-211ENST00000559850 PLEKHF1Q96S99 279 aa19.74■□□□□ 0.75
RABGGTA-211ENST00000559850 DNAJC10Q8IXB1 793 aa19.73■□□□□ 0.75
RABGGTA-211ENST00000559850 CEMIPQ8WUJ3 1361 aa19.72■□□□□ 0.75
RABGGTA-211ENST00000559850 ARXQ96QS3 562 aa19.72■□□□□ 0.75
RABGGTA-211ENST00000559850 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
RABGGTA-211ENST00000559850 FLAD1Q8NFF5 587 aa19.71■□□□□ 0.75
RABGGTA-211ENST00000559850 FHDC1Q9C0D6 1143 aaPredicted RBP19.71■□□□□ 0.75
RABGGTA-211ENST00000559850 CNTNAP4Q9C0A0 1308 aa19.71■□□□□ 0.75
RABGGTA-211ENST00000559850 KCNQ3O43525 872 aa19.7■□□□□ 0.74
RABGGTA-211ENST00000559850 HMGB2P26583 209 aaKnown RBP19.7■□□□□ 0.74
RABGGTA-211ENST00000559850 SSFA2P28290 1259 aa19.7■□□□□ 0.74
RABGGTA-211ENST00000559850 CRKLP46109 303 aaKnown RBP19.7■□□□□ 0.74
RABGGTA-211ENST00000559850 RTF1Q92541 710 aaKnown RBP19.7■□□□□ 0.74
RABGGTA-211ENST00000559850 NEFMP07197 916 aa19.69■□□□□ 0.74
RABGGTA-211ENST00000559850 POLD1P28340 1107 aa19.69■□□□□ 0.74
RABGGTA-211ENST00000559850 CCDC146Q8IYE0 955 aa19.69■□□□□ 0.74
RABGGTA-211ENST00000559850 TTC5Q8N0Z6 440 aa19.69■□□□□ 0.74
RABGGTA-211ENST00000559850 RTCBQ9Y3I0 505 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-211ENST00000559850 MAPK8IP3Q9UPT6 1336 aa19.69■□□□□ 0.74
RABGGTA-211ENST00000559850 NFE2L2Q16236 605 aa19.68■□□□□ 0.74
RABGGTA-211ENST00000559850 RC3H1Q5TC82 1133 aaKnown RBP19.68■□□□□ 0.74
RABGGTA-211ENST00000559850 THUMPD2Q9BTF0 503 aaKnown RBP19.68■□□□□ 0.74
RABGGTA-211ENST00000559850 BTBD11A6QL63 1104 aa19.67■□□□□ 0.74
RABGGTA-211ENST00000559850 INTS5Q6P9B9 1019 aaKnown RBP19.67■□□□□ 0.74
RABGGTA-211ENST00000559850 ZNF790Q6PG37 636 aa19.67■□□□□ 0.74
RABGGTA-211ENST00000559850 ZNF496Q96IT1 587 aaPredicted RBP19.67■□□□□ 0.74
RABGGTA-211ENST00000559850 RPS6KA4O75676 772 aa19.66■□□□□ 0.74
RABGGTA-211ENST00000559850 CYP19A1P11511 503 aaPredicted RBP19.66■□□□□ 0.74
RABGGTA-211ENST00000559850 TRAPPC3LQ5T215 181 aa19.66■□□□□ 0.74
RABGGTA-211ENST00000559850 ARHGEF1Q92888 912 aaKnown RBP19.66■□□□□ 0.74
RABGGTA-211ENST00000559850 SYT17Q9BSW7 474 aa19.66■□□□□ 0.74
RABGGTA-211ENST00000559850 WDR43Q15061 677 aaKnown RBP eCLIP19.65■□□□□ 0.74
RABGGTA-211ENST00000559850 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
RABGGTA-211ENST00000559850 CCDC87Q9NVE4 849 aa19.65■□□□□ 0.74
RABGGTA-211ENST00000559850 MIS18AQ9NYP9 233 aa19.65■□□□□ 0.74
RABGGTA-211ENST00000559850 RRP7AQ9Y3A4 280 aaKnown RBP19.65■□□□□ 0.74
RABGGTA-211ENST00000559850 KDM3BQ7LBC6 1761 aa19.65■□□□□ 0.74
RABGGTA-211ENST00000559850 HTATSF1O43719 755 aaKnown RBP19.64■□□□□ 0.73
RABGGTA-211ENST00000559850 PNNQ9H307 717 aaKnown RBP19.64■□□□□ 0.73
RABGGTA-211ENST00000559850 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
RABGGTA-211ENST00000559850 HEG1Q9ULI3 1381 aa19.64■□□□□ 0.73
RABGGTA-211ENST00000559850 SRP68Q9UHB9 627 aaKnown RBP19.63■□□□□ 0.73
RABGGTA-211ENST00000559850 ZBTB1Q9Y2K1 713 aa19.63■□□□□ 0.73
RABGGTA-211ENST00000559850 RFC4P35249 363 aa19.62■□□□□ 0.73
RABGGTA-211ENST00000559850 VSIG10Q8N0Z9 540 aa19.62■□□□□ 0.73
RABGGTA-211ENST00000559850 PRAMEF22A3QJZ6 481 aa19.61■□□□□ 0.73
RABGGTA-211ENST00000559850 CANXP27824 592 aaKnown RBP19.61■□□□□ 0.73
RABGGTA-211ENST00000559850 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms