RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 KCPQ6ZWJ8 1503 aa12.74□□□□□ -0.37
SNRPA1-208ENST00000559686 GNPATO15228 680 aa12.74□□□□□ -0.37
SNRPA1-208ENST00000559686 MMP10P09238 476 aa12.74□□□□□ -0.37
SNRPA1-208ENST00000559686 C9orf131Q5VYM1 1079 aa12.74□□□□□ -0.37
SNRPA1-208ENST00000559686 LINC00116Q8NCU8 138 aa12.74□□□□□ -0.37
SNRPA1-208ENST00000559686 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
SNRPA1-208ENST00000559686 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-208ENST00000559686 RRS1Q15050 365 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-208ENST00000559686 COG3Q96JB2 828 aa12.73□□□□□ -0.37
SNRPA1-208ENST00000559686 RRAGCQ9HB90 399 aa12.73□□□□□ -0.37
SNRPA1-208ENST00000559686 TERF2IPQ9NYB0 399 aa12.73□□□□□ -0.37
SNRPA1-208ENST00000559686 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
SNRPA1-208ENST00000559686 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
SNRPA1-208ENST00000559686 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
SNRPA1-208ENST00000559686 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
SNRPA1-208ENST00000559686 HSPA1AP0DMV8 641 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-208ENST00000559686 HSPA1BP0DMV9 641 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-208ENST00000559686 SSFA2P28290 1259 aa12.72□□□□□ -0.37
SNRPA1-208ENST00000559686 FSTL1Q12841 308 aa12.72□□□□□ -0.37
SNRPA1-208ENST00000559686 DPEP1P16444 411 aa12.71□□□□□ -0.37
SNRPA1-208ENST00000559686 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-208ENST00000559686 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-208ENST00000559686 CYP27B1O15528 508 aa12.7□□□□□ -0.38
SNRPA1-208ENST00000559686 HMGB2P26583 209 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-208ENST00000559686 NEUROD1Q13562 356 aa12.7□□□□□ -0.38
SNRPA1-208ENST00000559686 PIGBQ92521 554 aa12.7□□□□□ -0.38
SNRPA1-208ENST00000559686 RNF181Q9P0P0 153 aa12.7□□□□□ -0.38
SNRPA1-208ENST00000559686 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-208ENST00000559686 KDM2BQ8NHM5 1336 aa12.69□□□□□ -0.38
SNRPA1-208ENST00000559686 LOC102724428A0A0B4J2F2 783 aa12.69□□□□□ -0.38
SNRPA1-208ENST00000559686 SIK1P57059 783 aa12.69□□□□□ -0.38
SNRPA1-208ENST00000559686 TGFB2P61812 414 aa12.69□□□□□ -0.38
SNRPA1-208ENST00000559686 ITPK1Q13572 414 aa12.69□□□□□ -0.38
SNRPA1-208ENST00000559686 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
SNRPA1-208ENST00000559686 BRCA1P38398 1863 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-208ENST00000559686 CGNL1Q0VF96 1302 aa12.68□□□□□ -0.38
SNRPA1-208ENST00000559686 TNRC6CQ9HCJ0 1690 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-208ENST00000559686 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
SNRPA1-208ENST00000559686 C10orf71Q711Q0 1435 aa12.68□□□□□ -0.38
SNRPA1-208ENST00000559686 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
SNRPA1-208ENST00000559686 PLEKHG2Q9H7P9 1386 aa12.68□□□□□ -0.38
SNRPA1-208ENST00000559686 ARFGEF1Q9Y6D6 1849 aa12.67□□□□□ -0.38
SNRPA1-208ENST00000559686 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
SNRPA1-208ENST00000559686 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
SNRPA1-208ENST00000559686 ASAP1Q9ULH1 1129 aa12.67□□□□□ -0.38
SNRPA1-208ENST00000559686 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
SNRPA1-208ENST00000559686 TMF1P82094 1093 aa12.66□□□□□ -0.38
SNRPA1-208ENST00000559686 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
SNRPA1-208ENST00000559686 SMC1BQ8NDV3 1235 aa12.66□□□□□ -0.38
SNRPA1-208ENST00000559686 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-208ENST00000559686 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
SNRPA1-208ENST00000559686 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
SNRPA1-208ENST00000559686 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
SNRPA1-208ENST00000559686 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
SNRPA1-208ENST00000559686 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
SNRPA1-208ENST00000559686 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
SNRPA1-208ENST00000559686 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-208ENST00000559686 KCNA3P22001 575 aa12.63□□□□□ -0.39
SNRPA1-208ENST00000559686 NLGN1Q8N2Q7 840 aa12.63□□□□□ -0.39
SNRPA1-208ENST00000559686 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
SNRPA1-208ENST00000559686 SBF1O95248 1867 aa12.63□□□□□ -0.39
SNRPA1-208ENST00000559686 CHRNA5P30532 468 aa12.62□□□□□ -0.39
SNRPA1-208ENST00000559686 RFC4P35249 363 aa12.62□□□□□ -0.39
SNRPA1-208ENST00000559686 RASSF7Q02833 373 aa12.62□□□□□ -0.39
SNRPA1-208ENST00000559686 DALRD3Q5D0E6 543 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-208ENST00000559686 ARHGEF1Q92888 912 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-208ENST00000559686 GYS1P13807 737 aa12.61□□□□□ -0.39
SNRPA1-208ENST00000559686 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
SNRPA1-208ENST00000559686 INSRP06213 1382 aa12.6□□□□□ -0.39
SNRPA1-208ENST00000559686 SLC34A2O95436 690 aa12.6□□□□□ -0.39
SNRPA1-208ENST00000559686 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
SNRPA1-208ENST00000559686 SPG7Q9UQ90 795 aa12.6□□□□□ -0.39
SNRPA1-208ENST00000559686 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
SNRPA1-208ENST00000559686 PPM1GO15355 546 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-208ENST00000559686 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-208ENST00000559686 MKRN1Q9UHC7 482 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-208ENST00000559686 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-208ENST00000559686 TIAM2Q8IVF5 1701 aa12.59□□□□□ -0.39
SNRPA1-208ENST00000559686 FLT4P35916 1363 aa12.58□□□□□ -0.4
SNRPA1-208ENST00000559686 FYB1O15117 783 aa12.58□□□□□ -0.4
SNRPA1-208ENST00000559686 VEGFAP15692 232 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-208ENST00000559686 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-208ENST00000559686 CCDC88AQ3V6T2 1871 aa12.58□□□□□ -0.4
SNRPA1-208ENST00000559686 SLC4A9Q96Q91 983 aa12.58□□□□□ -0.4
SNRPA1-208ENST00000559686 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-208ENST00000559686 SPDYE2BA6NHP3 402 aa12.57□□□□□ -0.4
SNRPA1-208ENST00000559686 SPDYE6P0CI01 402 aa12.57□□□□□ -0.4
SNRPA1-208ENST00000559686 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNRPA1-208ENST00000559686 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
SNRPA1-208ENST00000559686 EMILIN1Q9Y6C2 1016 aa12.57□□□□□ -0.4
SNRPA1-208ENST00000559686 DDR1Q08345 913 aa12.56□□□□□ -0.4
SNRPA1-208ENST00000559686 FKBP8Q14318 412 aa12.56□□□□□ -0.4
SNRPA1-208ENST00000559686 KDRP35968 1356 aa12.56□□□□□ -0.4
SNRPA1-208ENST00000559686 GLTPD2A6NH11 291 aa12.55□□□□□ -0.4
SNRPA1-208ENST00000559686 HAX1O00165 279 aa12.55□□□□□ -0.4
SNRPA1-208ENST00000559686 FOXN1O15353 648 aa12.55□□□□□ -0.4
SNRPA1-208ENST00000559686 RPS6KA4O75676 772 aa12.55□□□□□ -0.4
SNRPA1-208ENST00000559686 PHKG2P15735 406 aa12.55□□□□□ -0.4
SNRPA1-208ENST00000559686 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
SNRPA1-208ENST00000559686 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms