RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 ERBB3P21860 1342 aa19.93■□□□□ 0.78
USP8-208ENST00000559329 COL18A1P39060 1754 aa19.93■□□□□ 0.78
USP8-208ENST00000559329 XIRP1Q702N8 1843 aaKnown RBP19.93■□□□□ 0.78
USP8-208ENST00000559329 CRYBG1Q9Y4K1 1723 aa19.92■□□□□ 0.78
USP8-208ENST00000559329 HOXB7P09629 217 aa19.92■□□□□ 0.78
USP8-208ENST00000559329 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
USP8-208ENST00000559329 CADPS2Q86UW7 1296 aa19.92■□□□□ 0.78
USP8-208ENST00000559329 ABCC6O95255 1503 aa19.91■□□□□ 0.78
USP8-208ENST00000559329 SIPA1L3O60292 1781 aaPredicted RBP19.91■□□□□ 0.78
USP8-208ENST00000559329 TNS3Q68CZ2 1445 aa19.91■□□□□ 0.78
USP8-208ENST00000559329 SLC4A10Q6U841 1118 aa19.9■□□□□ 0.78
USP8-208ENST00000559329 FKBP5Q13451 457 aaPredicted RBP19.9■□□□□ 0.78
USP8-208ENST00000559329 HDGFL1Q5TGJ6 251 aa19.9■□□□□ 0.78
USP8-208ENST00000559329 NPHP3Q7Z494 1330 aa19.89■□□□□ 0.77
USP8-208ENST00000559329 RNMTO43148 476 aaKnown RBP19.89■□□□□ 0.77
USP8-208ENST00000559329 HSPA2P54652 639 aa19.89■□□□□ 0.77
USP8-208ENST00000559329 C22orf23Q9BZE7 217 aa19.89■□□□□ 0.77
USP8-208ENST00000559329 PLEKHG5O94827 1062 aa19.88■□□□□ 0.77
USP8-208ENST00000559329 MFAP1P55081 439 aaKnown RBP19.88■□□□□ 0.77
USP8-208ENST00000559329 PLEKHM2Q8IWE5 1019 aa19.88■□□□□ 0.77
USP8-208ENST00000559329 NECTIN2Q92692 538 aa19.88■□□□□ 0.77
USP8-208ENST00000559329 DDX17Q92841 729 aaKnown RBP19.88■□□□□ 0.77
USP8-208ENST00000559329 BECN1Q14457 450 aa19.88■□□□□ 0.77
USP8-208ENST00000559329 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
USP8-208ENST00000559329 ZC3H6P61129 1189 aaKnown RBP19.87■□□□□ 0.77
USP8-208ENST00000559329 TEFQ10587 303 aa19.87■□□□□ 0.77
USP8-208ENST00000559329 KCNQ3O43525 872 aa19.86■□□□□ 0.77
USP8-208ENST00000559329 GNAI2P04899 355 aa19.86■□□□□ 0.77
USP8-208ENST00000559329 C1orf141Q5JVX7 400 aa19.86■□□□□ 0.77
USP8-208ENST00000559329 USP35Q9P2H5 1018 aa19.86■□□□□ 0.77
USP8-208ENST00000559329 STRCQ7RTU9 1775 aa19.86■□□□□ 0.77
USP8-208ENST00000559329 HEG1Q9ULI3 1381 aa19.86■□□□□ 0.77
USP8-208ENST00000559329 BTBD11A6QL63 1104 aa19.86■□□□□ 0.77
USP8-208ENST00000559329 PLEKHG2Q9H7P9 1386 aa19.86■□□□□ 0.77
USP8-208ENST00000559329 HMMRO75330 724 aa19.85■□□□□ 0.77
USP8-208ENST00000559329 GNAI3P08754 354 aa19.85■□□□□ 0.77
USP8-208ENST00000559329 GSPT1P15170 499 aaKnown RBP19.84■□□□□ 0.77
USP8-208ENST00000559329 RBM25P49756 843 aaKnown RBP19.84■□□□□ 0.77
USP8-208ENST00000559329 CHMP4AQ9BY43 222 aa19.84■□□□□ 0.77
USP8-208ENST00000559329 SPATA31A3Q5VYP0 1347 aa19.84■□□□□ 0.77
USP8-208ENST00000559329 PHAXQ9H814 394 aaKnown RBP19.84■□□□□ 0.77
USP8-208ENST00000559329 RTL5Q5HYW3 569 aaPredicted RBP19.83■□□□□ 0.77
USP8-208ENST00000559329 TBC1D2Q9BYX2 928 aa19.83■□□□□ 0.77
USP8-208ENST00000559329 CPDO75976 1380 aa19.83■□□□□ 0.76
USP8-208ENST00000559329 TTC22Q5TAA0 569 aa19.82■□□□□ 0.76
USP8-208ENST00000559329 TBC1D9Q6ZT07 1266 aa19.82■□□□□ 0.76
USP8-208ENST00000559329 C16orf71Q8IYS4 520 aaPredicted RBP19.82■□□□□ 0.76
USP8-208ENST00000559329 CHPF2Q9P2E5 772 aa19.82■□□□□ 0.76
USP8-208ENST00000559329 SCN11AQ9UI33 1791 aa19.82■□□□□ 0.76
USP8-208ENST00000559329 MEGF6O75095 1541 aa19.81■□□□□ 0.76
USP8-208ENST00000559329 USP44Q9H0E7 712 aa19.81■□□□□ 0.76
USP8-208ENST00000559329 OTUD7AQ8TE49 926 aaPredicted RBP19.8■□□□□ 0.76
USP8-208ENST00000559329 KDM6AO15550 1401 aaPredicted RBP19.8■□□□□ 0.76
USP8-208ENST00000559329 CDC45O75419 566 aa19.8■□□□□ 0.76
USP8-208ENST00000559329 EIF2S2P20042 333 aaKnown RBP19.8■□□□□ 0.76
USP8-208ENST00000559329 ATP8B2P98198 1209 aa19.8■□□□□ 0.76
USP8-208ENST00000559329 SMARCA5O60264 1052 aaPredicted RBP19.79■□□□□ 0.76
USP8-208ENST00000559329 GIGYF1O75420 1035 aaPredicted RBP19.79■□□□□ 0.76
USP8-208ENST00000559329 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
USP8-208ENST00000559329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.79■□□□□ 0.764e-8■■■■■ 28.5
USP8-208ENST00000559329 PKD1L3Q7Z443 1732 aa19.79■□□□□ 0.76
USP8-208ENST00000559329 CABLES1Q8TDN4 633 aa19.78■□□□□ 0.76
USP8-208ENST00000559329 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
USP8-208ENST00000559329 NFKBIBQ15653 356 aa19.78■□□□□ 0.76
USP8-208ENST00000559329 RAPGEF4Q8WZA2 1011 aa19.78■□□□□ 0.76
USP8-208ENST00000559329 ANTXR1Q9H6X2 564 aa19.78■□□□□ 0.76
USP8-208ENST00000559329 PNMA6EA0A0J9YXQ4 647 aa19.77■□□□□ 0.76
USP8-208ENST00000559329 OSBPL3Q9H4L5 887 aa19.77■□□□□ 0.76
USP8-208ENST00000559329 LRRFIP2Q9Y608 721 aaKnown RBP19.77■□□□□ 0.76
USP8-208ENST00000559329 ADCY9O60503 1353 aa19.77■□□□□ 0.76
USP8-208ENST00000559329 MRC1P22897 1456 aa19.77■□□□□ 0.76
USP8-208ENST00000559329 KDM4FA0A1W2PPD8 638 aa19.76■□□□□ 0.75
USP8-208ENST00000559329 DBF4Q9UBU7 674 aaPredicted RBP19.76■□□□□ 0.75
USP8-208ENST00000559329 IBTKQ9P2D0 1353 aaPredicted RBP19.76■□□□□ 0.75
USP8-208ENST00000559329 SALL3Q9BXA9 1300 aa19.76■□□□□ 0.75
USP8-208ENST00000559329 PHKG2P15735 406 aa19.76■□□□□ 0.75
USP8-208ENST00000559329 TATP17735 454 aaPredicted RBP19.76■□□□□ 0.75
USP8-208ENST00000559329 BEND3Q5T5X7 828 aa19.76■□□□□ 0.75
USP8-208ENST00000559329 DNAAF4Q8WXU2 420 aa19.76■□□□□ 0.75
USP8-208ENST00000559329 SRCIN1Q9C0H9 1055 aa19.76■□□□□ 0.75
USP8-208ENST00000559329 UBTFL1P0CB47 393 aaPredicted RBP19.75■□□□□ 0.75
USP8-208ENST00000559329 TUBGCP6Q96RT7 1819 aa19.74■□□□□ 0.75
USP8-208ENST00000559329 KIF2CQ99661 725 aa19.74■□□□□ 0.75
USP8-208ENST00000559329 PI4KAP2A4QPH2 592 aa19.74■□□□□ 0.75
USP8-208ENST00000559329 APBB1O00213 710 aa19.74■□□□□ 0.75
USP8-208ENST00000559329 CHRNA2Q15822 529 aa19.74■□□□□ 0.75
USP8-208ENST00000559329 PI4KAP1Q8N8J0 262 aa19.74■□□□□ 0.75
USP8-208ENST00000559329 SPG7Q9UQ90 795 aa19.74■□□□□ 0.75
USP8-208ENST00000559329 EXOC6BQ9Y2D4 811 aa19.74■□□□□ 0.75
USP8-208ENST00000559329 SOS2Q07890 1332 aaPredicted RBP19.73■□□□□ 0.75
USP8-208ENST00000559329 SSH3Q8TE77 659 aa19.73■□□□□ 0.75
USP8-208ENST00000559329 SLC52A2Q9HAB3 445 aa19.73■□□□□ 0.75
USP8-208ENST00000559329 C5P01031 1676 aa19.73■□□□□ 0.75
USP8-208ENST00000559329 EIF5BO60841 1220 aaKnown RBP19.72■□□□□ 0.75
USP8-208ENST00000559329 ANXA1P04083 346 aa19.72■□□□□ 0.75
USP8-208ENST00000559329 SDSP20132 328 aa19.72■□□□□ 0.75
USP8-208ENST00000559329 PARP4Q9UKK3 1724 aaKnown RBP19.72■□□□□ 0.75
USP8-208ENST00000559329 PRAMEF22A3QJZ6 481 aa19.72■□□□□ 0.75
USP8-208ENST00000559329 POLA2Q14181 598 aa19.72■□□□□ 0.75
USP8-208ENST00000559329 PROSER3Q2NL68 480 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms