RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
SNRPA1-207ENST00000559309 SF3B2Q13435 895 aaKnown RBP19.45■□□□□ 0.7
SNRPA1-207ENST00000559309 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
SNRPA1-207ENST00000559309 WDR63Q8IWG1 891 aa19.45■□□□□ 0.7
SNRPA1-207ENST00000559309 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
SNRPA1-207ENST00000559309 BABAM1Q9NWV8 329 aa19.45■□□□□ 0.7
SNRPA1-207ENST00000559309 KCNQ2O43526 872 aa19.44■□□□□ 0.7
SNRPA1-207ENST00000559309 PTF1AQ7RTS3 328 aa19.44■□□□□ 0.7
SNRPA1-207ENST00000559309 PIGBQ92521 554 aa19.44■□□□□ 0.7
SNRPA1-207ENST00000559309 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
SNRPA1-207ENST00000559309 BCL11BQ9C0K0 894 aaPredicted RBP19.44■□□□□ 0.7
SNRPA1-207ENST00000559309 LY75O60449 1722 aa19.44■□□□□ 0.7
SNRPA1-207ENST00000559309 ZBED9Q6R2W3 1325 aa19.44■□□□□ 0.7
SNRPA1-207ENST00000559309 PRIM1P49642 420 aaKnown RBP19.43■□□□□ 0.7
SNRPA1-207ENST00000559309 NFATC2IPQ8NCF5 419 aa19.43■□□□□ 0.7
SNRPA1-207ENST00000559309 KCPQ6ZWJ8 1503 aa19.42■□□□□ 0.7
SNRPA1-207ENST00000559309 CHL1O00533 1208 aa19.42■□□□□ 0.7
SNRPA1-207ENST00000559309 TAF7Q15545 349 aaPredicted RBP19.42■□□□□ 0.7
SNRPA1-207ENST00000559309 HEG1Q9ULI3 1381 aa19.42■□□□□ 0.7
SNRPA1-207ENST00000559309 TRMT2AQ8IZ69 625 aaKnown RBP19.41■□□□□ 0.7
SNRPA1-207ENST00000559309 ACSBG1Q96GR2 724 aa19.41■□□□□ 0.7
SNRPA1-207ENST00000559309 CFAP44Q96MT7 982 aa19.41■□□□□ 0.7
SNRPA1-207ENST00000559309 SENP3-EIF4A1A0A087X0R7 540 aa19.4■□□□□ 0.7
SNRPA1-207ENST00000559309 CABP4P57796 275 aa19.4■□□□□ 0.7
SNRPA1-207ENST00000559309 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNRPA1-207ENST00000559309 TEFQ10587 303 aa19.4■□□□□ 0.7
SNRPA1-207ENST00000559309 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
SNRPA1-207ENST00000559309 IFT57Q9NWB7 429 aa19.4■□□□□ 0.7
SNRPA1-207ENST00000559309 CALD1Q05682 793 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-207ENST00000559309 TMOD3Q9NYL9 352 aa19.39■□□□□ 0.69
SNRPA1-207ENST00000559309 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
SNRPA1-207ENST00000559309 BAG6P46379 1132 aa19.37■□□□□ 0.69
SNRPA1-207ENST00000559309 TRIM37O94972 964 aa19.36■□□□□ 0.69
SNRPA1-207ENST00000559309 GNAI1P63096 354 aa19.36■□□□□ 0.69
SNRPA1-207ENST00000559309 ZNF790Q6PG37 636 aa19.36■□□□□ 0.69
SNRPA1-207ENST00000559309 SALL2Q9Y467 1007 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-207ENST00000559309 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
SNRPA1-207ENST00000559309 TJP1Q07157 1748 aa19.35■□□□□ 0.69
SNRPA1-207ENST00000559309 PLSCR1O15162 318 aa19.35■□□□□ 0.69
SNRPA1-207ENST00000559309 GOLGA2Q08379 1002 aa19.35■□□□□ 0.69
SNRPA1-207ENST00000559309 SLFN5Q08AF3 891 aa19.35■□□□□ 0.69
SNRPA1-207ENST00000559309 ASAP1Q9ULH1 1129 aa19.35■□□□□ 0.69
SNRPA1-207ENST00000559309 RREB1Q92766 1687 aa19.34■□□□□ 0.69
SNRPA1-207ENST00000559309 BTBD11A6QL63 1104 aa19.34■□□□□ 0.69
SNRPA1-207ENST00000559309 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
SNRPA1-207ENST00000559309 COL5A3P25940 1745 aaPredicted RBP19.34■□□□□ 0.69
SNRPA1-207ENST00000559309 KCNQ3O43525 872 aa19.33■□□□□ 0.68
SNRPA1-207ENST00000559309 SLC4A9Q96Q91 983 aa19.33■□□□□ 0.68
SNRPA1-207ENST00000559309 LRP5O75197 1615 aa19.33■□□□□ 0.68
SNRPA1-207ENST00000559309 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 TAF1LQ8IZX4 1826 aa19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 E9PSI1 815 aa19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 EIF4A1P60842 406 aaKnown RBP19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 SLC39A6Q13433 755 aa19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 SMARCC1Q92922 1105 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 SYTL4Q96C24 671 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 MIS18AQ9NYP9 233 aa19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 C5P01031 1676 aa19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 LAMB4A4D0S4 1761 aa19.32■□□□□ 0.68
SNRPA1-207ENST00000559309 FANCIQ9NVI1 1328 aa19.31■□□□□ 0.68
SNRPA1-207ENST00000559309 VSIG10Q8N0Z9 540 aa19.31■□□□□ 0.68
SNRPA1-207ENST00000559309 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
SNRPA1-207ENST00000559309 DUSP27Q5VZP5 1158 aa19.3■□□□□ 0.68
SNRPA1-207ENST00000559309 PROM2Q8N271 834 aa19.3■□□□□ 0.68
SNRPA1-207ENST00000559309 ZNF496Q96IT1 587 aaPredicted RBP19.3■□□□□ 0.68
SNRPA1-207ENST00000559309 TSPYL4Q9UJ04 414 aa19.3■□□□□ 0.68
SNRPA1-207ENST00000559309 EN1Q05925 392 aaPredicted RBP19.28■□□□□ 0.68
SNRPA1-207ENST00000559309 TSR2Q969E8 191 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-207ENST00000559309 CAMKK2Q96RR4 588 aa19.28■□□□□ 0.68
SNRPA1-207ENST00000559309 MYH16Q9H6N6 1097 aa19.28■□□□□ 0.68
SNRPA1-207ENST00000559309 PSDA5PKW4 1024 aaPredicted RBP19.27■□□□□ 0.68
SNRPA1-207ENST00000559309 SOS1Q07889 1333 aaPredicted RBP19.26■□□□□ 0.67
SNRPA1-207ENST00000559309 NUP188Q5SRE5 1749 aa19.26■□□□□ 0.67
SNRPA1-207ENST00000559309 LOC102724428A0A0B4J2F2 783 aa19.26■□□□□ 0.67
SNRPA1-207ENST00000559309 GIGYF1O75420 1035 aaPredicted RBP19.26■□□□□ 0.67
SNRPA1-207ENST00000559309 APBA3O96018 575 aa19.26■□□□□ 0.67
SNRPA1-207ENST00000559309 HOXB7P09629 217 aa19.26■□□□□ 0.67
SNRPA1-207ENST00000559309 SIK1P57059 783 aa19.26■□□□□ 0.67
SNRPA1-207ENST00000559309 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
SNRPA1-207ENST00000559309 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
SNRPA1-207ENST00000559309 TTC5Q8N0Z6 440 aa19.25■□□□□ 0.67
SNRPA1-207ENST00000559309 LRRC4BQ9NT99 713 aa19.25■□□□□ 0.67
SNRPA1-207ENST00000559309 ITPK1Q13572 414 aa19.24■□□□□ 0.67
SNRPA1-207ENST00000559309 C8orf58Q8NAV2 365 aa19.24■□□□□ 0.67
SNRPA1-207ENST00000559309 MYH14Q7Z406 1995 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-207ENST00000559309 TXNRD1Q16881 649 aa19.23■□□□□ 0.67
SNRPA1-207ENST00000559309 KRT24Q2M2I5 525 aa19.23■□□□□ 0.67
SNRPA1-207ENST00000559309 LAS1LQ9Y4W2 734 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-207ENST00000559309 PTCD1O75127 700 aaKnown RBP19.22■□□□□ 0.67
SNRPA1-207ENST00000559309 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
SNRPA1-207ENST00000559309 C4BP0C0L5 1744 aa19.22■□□□□ 0.67
SNRPA1-207ENST00000559309 PRAMEF22A3QJZ6 481 aa19.21■□□□□ 0.67
SNRPA1-207ENST00000559309 EXOSC9Q06265 439 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-207ENST00000559309 TSPYL6Q8N831 410 aa19.21■□□□□ 0.67
SNRPA1-207ENST00000559309 VAMP4O75379 141 aa19.2■□□□□ 0.66
SNRPA1-207ENST00000559309 CYP19A1P11511 503 aaPredicted RBP19.2■□□□□ 0.66
SNRPA1-207ENST00000559309 R3HDM1Q15032 1099 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-207ENST00000559309 EZH2Q15910 746 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-207ENST00000559309 TEX13AQ9BXU3 409 aaPredicted RBP19.2■□□□□ 0.66
SNRPA1-207ENST00000559309 QSER1Q2KHR3 1735 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms