RNA–Protein interactions for RNA: ENST00000559235.5

MIR9-3HG-207, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 561 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-207ENST00000559235 GNPATO15228 680 aa13.53□□□□□ -0.24
MIR9-3HG-207ENST00000559235 CTCFP49711 727 aaPredicted RBP13.53□□□□□ -0.24
MIR9-3HG-207ENST00000559235 ITPK1Q13572 414 aa13.53□□□□□ -0.24
MIR9-3HG-207ENST00000559235 MPRIPQ6WCQ1 1025 aa13.53□□□□□ -0.24
MIR9-3HG-207ENST00000559235 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
MIR9-3HG-207ENST00000559235 ZC3H4Q9UPT8 1303 aaKnown RBP13.53□□□□□ -0.24
MIR9-3HG-207ENST00000559235 LBX1P52954 281 aa13.52□□□□□ -0.25
MIR9-3HG-207ENST00000559235 RASSF7Q02833 373 aa13.52□□□□□ -0.25
MIR9-3HG-207ENST00000559235 ZNF831Q5JPB2 1677 aa13.52□□□□□ -0.25
MIR9-3HG-207ENST00000559235 THSD7BQ9C0I4 1608 aa13.51□□□□□ -0.25
MIR9-3HG-207ENST00000559235 VEGFAP15692 232 aaPredicted RBP13.51□□□□□ -0.25
MIR9-3HG-207ENST00000559235 EDC4Q6P2E9 1401 aaKnown RBP13.5□□□□□ -0.25
MIR9-3HG-207ENST00000559235 MAP3K19Q56UN5 1328 aa13.5□□□□□ -0.25
MIR9-3HG-207ENST00000559235 LOC102724428A0A0B4J2F2 783 aa13.5□□□□□ -0.25
MIR9-3HG-207ENST00000559235 GLTPD2A6NH11 291 aa13.5□□□□□ -0.25
MIR9-3HG-207ENST00000559235 CYP27B1O15528 508 aa13.5□□□□□ -0.25
MIR9-3HG-207ENST00000559235 HOXC9P31274 260 aa13.5□□□□□ -0.25
MIR9-3HG-207ENST00000559235 SIK1P57059 783 aa13.5□□□□□ -0.25
MIR9-3HG-207ENST00000559235 USHBP1Q8N6Y0 703 aa13.5□□□□□ -0.25
MIR9-3HG-207ENST00000559235 KDRP35968 1356 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 PCDH11XQ9BZA7 1347 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 PCDH11YQ9BZA8 1340 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 PIGBQ92521 554 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 CCDC87Q9NVE4 849 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 WBP1LQ9NX94 342 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 ADAMTS7Q9UKP4 1686 aa13.49□□□□□ -0.25
MIR9-3HG-207ENST00000559235 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
MIR9-3HG-207ENST00000559235 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
MIR9-3HG-207ENST00000559235 DALRD3Q5D0E6 543 aaKnown RBP13.48□□□□□ -0.25
MIR9-3HG-207ENST00000559235 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
MIR9-3HG-207ENST00000559235 POTEJP0CG39 1038 aa13.47□□□□□ -0.25
MIR9-3HG-207ENST00000559235 GYS1P13807 737 aa13.47□□□□□ -0.25
MIR9-3HG-207ENST00000559235 FBLN1P23142 703 aa13.47□□□□□ -0.25
MIR9-3HG-207ENST00000559235 VEGFBP49765 207 aa13.47□□□□□ -0.25
MIR9-3HG-207ENST00000559235 A0A1W2PP64 1363 aa13.46□□□□□ -0.25
MIR9-3HG-207ENST00000559235 CHRNA5P30532 468 aa13.46□□□□□ -0.25
MIR9-3HG-207ENST00000559235 TMF1P82094 1093 aa13.46□□□□□ -0.25
MIR9-3HG-207ENST00000559235 PASKQ96RG2 1323 aa13.45□□□□□ -0.26
MIR9-3HG-207ENST00000559235 LTBP1Q14766 1721 aa13.45□□□□□ -0.26
MIR9-3HG-207ENST00000559235 NRXN2Q9P2S2 1712 aa13.45□□□□□ -0.26
MIR9-3HG-207ENST00000559235 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
MIR9-3HG-207ENST00000559235 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
MIR9-3HG-207ENST00000559235 AIDAQ96BJ3 306 aa13.45□□□□□ -0.26
MIR9-3HG-207ENST00000559235 ADAMTSL1Q8N6G6 1762 aa13.45□□□□□ -0.26
MIR9-3HG-207ENST00000559235 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
MIR9-3HG-207ENST00000559235 CCDC85CA6NKD9 419 aa13.44□□□□□ -0.26
MIR9-3HG-207ENST00000559235 DDR1Q08345 913 aa13.44□□□□□ -0.26
MIR9-3HG-207ENST00000559235 ARHGEF1Q92888 912 aaKnown RBP13.43□□□□□ -0.26
MIR9-3HG-207ENST00000559235 SLC4A9Q96Q91 983 aa13.43□□□□□ -0.26
MIR9-3HG-207ENST00000559235 ASAP1Q9ULH1 1129 aa13.43□□□□□ -0.26
MIR9-3HG-207ENST00000559235 NCAPD2Q15021 1401 aa13.42□□□□□ -0.26
MIR9-3HG-207ENST00000559235 LMNB1P20700 586 aa13.42□□□□□ -0.26
MIR9-3HG-207ENST00000559235 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
MIR9-3HG-207ENST00000559235 RAPGEF4Q8WZA2 1011 aa13.42□□□□□ -0.26
MIR9-3HG-207ENST00000559235 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
MIR9-3HG-207ENST00000559235 NFKBIEO00221 500 aa13.41□□□□□ -0.26
MIR9-3HG-207ENST00000559235 ATP6V1AP38606 617 aa13.41□□□□□ -0.26
MIR9-3HG-207ENST00000559235 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
MIR9-3HG-207ENST00000559235 TJP1Q07157 1748 aa13.41□□□□□ -0.26
MIR9-3HG-207ENST00000559235 SCN4AP35499 1836 aa13.41□□□□□ -0.26
MIR9-3HG-207ENST00000559235 CASP8AP2Q9UKL3 1982 aa13.4□□□□□ -0.26
MIR9-3HG-207ENST00000559235 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
MIR9-3HG-207ENST00000559235 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
MIR9-3HG-207ENST00000559235 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
MIR9-3HG-207ENST00000559235 COL11A2P13942 1736 aaPredicted RBP13.39□□□□□ -0.27
MIR9-3HG-207ENST00000559235 ADRA2BP18089 450 aa13.39□□□□□ -0.27
MIR9-3HG-207ENST00000559235 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
MIR9-3HG-207ENST00000559235 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
MIR9-3HG-207ENST00000559235 AMPHP49418 695 aa13.38□□□□□ -0.27
MIR9-3HG-207ENST00000559235 FKBP8Q14318 412 aa13.38□□□□□ -0.27
MIR9-3HG-207ENST00000559235 SLC12A5Q9H2X9 1139 aa13.38□□□□□ -0.27
MIR9-3HG-207ENST00000559235 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
MIR9-3HG-207ENST00000559235 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
MIR9-3HG-207ENST00000559235 SRP68Q9UHB9 627 aaKnown RBP13.37□□□□□ -0.27
MIR9-3HG-207ENST00000559235 SMG6Q86US8 1419 aaKnown RBP13.37□□□□□ -0.27
MIR9-3HG-207ENST00000559235 ANKRD26Q9UPS8 1709 aa13.36□□□□□ -0.27
MIR9-3HG-207ENST00000559235 POLRMTO00411 1230 aaKnown RBP13.36□□□□□ -0.27
MIR9-3HG-207ENST00000559235 CACNA1SQ13698 1873 aa13.36□□□□□ -0.27
MIR9-3HG-207ENST00000559235 RASSF10A6NK89 507 aa13.35□□□□□ -0.27
MIR9-3HG-207ENST00000559235 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
MIR9-3HG-207ENST00000559235 ITGBL1O95965 494 aaPredicted RBP13.35□□□□□ -0.27
MIR9-3HG-207ENST00000559235 HDGFL2Q7Z4V5 671 aaPredicted RBP13.35□□□□□ -0.27
MIR9-3HG-207ENST00000559235 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
MIR9-3HG-207ENST00000559235 USP42Q9H9J4 1324 aaKnown RBP13.35□□□□□ -0.27
MIR9-3HG-207ENST00000559235 INSRP06213 1382 aa13.34□□□□□ -0.27
MIR9-3HG-207ENST00000559235 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
MIR9-3HG-207ENST00000559235 RFC4P35249 363 aa13.34□□□□□ -0.27
MIR9-3HG-207ENST00000559235 RC3H1Q5TC82 1133 aaKnown RBP13.34□□□□□ -0.27
MIR9-3HG-207ENST00000559235 CARMIL3Q8ND23 1372 aa13.33□□□□□ -0.27
MIR9-3HG-207ENST00000559235 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
MIR9-3HG-207ENST00000559235 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
MIR9-3HG-207ENST00000559235 KIF20BQ96Q89 1820 aa13.33□□□□□ -0.28
MIR9-3HG-207ENST00000559235 ARFGEF2Q9Y6D5 1785 aa13.32□□□□□ -0.28
MIR9-3HG-207ENST00000559235 COG3Q96JB2 828 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms