RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
CLPX-204ENST00000559152 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
CLPX-204ENST00000559152 PXDNLA1KZ92 1463 aa14.04□□□□□ -0.16
CLPX-204ENST00000559152 MED1Q15648 1581 aaPredicted RBP14.04□□□□□ -0.16
CLPX-204ENST00000559152 TMEM94Q12767 1356 aa14.03□□□□□ -0.16
CLPX-204ENST00000559152 LRRC59Q96AG4 307 aaKnown RBP14.03□□□□□ -0.16
CLPX-204ENST00000559152 F6X3S4 739 aa14.02□□□□□ -0.16
CLPX-204ENST00000559152 RBM25P49756 843 aaKnown RBP14.02□□□□□ -0.16
CLPX-204ENST00000559152 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.16
CLPX-204ENST00000559152 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.17
CLPX-204ENST00000559152 LMO7Q8WWI1 1683 aa14.01□□□□□ -0.17
CLPX-204ENST00000559152 FAM208AQ9UK61 1670 aaKnown RBP14.01□□□□□ -0.17
CLPX-204ENST00000559152 CACNA1FO60840 1977 aa14.01□□□□□ -0.17
CLPX-204ENST00000559152 NPHP3Q7Z494 1330 aa14.01□□□□□ -0.17
CLPX-204ENST00000559152 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
CLPX-204ENST00000559152 CDC45O75419 566 aa14.01□□□□□ -0.17
CLPX-204ENST00000559152 PLEKHM2Q8IWE5 1019 aa14.01□□□□□ -0.17
CLPX-204ENST00000559152 PLEKHG2Q9H7P9 1386 aa14.01□□□□□ -0.17
CLPX-204ENST00000559152 LGR6Q9HBX8 967 aa14□□□□□ -0.17
CLPX-204ENST00000559152 RNMTO43148 476 aaKnown RBP14□□□□□ -0.17
CLPX-204ENST00000559152 CAMTA1Q9Y6Y1 1673 aa14□□□□□ -0.17
CLPX-204ENST00000559152 NFKBIBQ15653 356 aa13.99□□□□□ -0.17
CLPX-204ENST00000559152 TBC1D2Q9BYX2 928 aa13.99□□□□□ -0.17
CLPX-204ENST00000559152 ERBB3P21860 1342 aa13.99□□□□□ -0.17
CLPX-204ENST00000559152 ALS2Q96Q42 1657 aa13.99□□□□□ -0.17
CLPX-204ENST00000559152 TTC22Q5TAA0 569 aa13.99□□□□□ -0.17
CLPX-204ENST00000559152 CASC1Q6TDU7 716 aa13.98□□□□□ -0.17
CLPX-204ENST00000559152 TBC1D9Q6ZT07 1266 aa13.98□□□□□ -0.17
CLPX-204ENST00000559152 NECTIN2Q92692 538 aa13.98□□□□□ -0.17
CLPX-204ENST00000559152 ATP8B2P98198 1209 aa13.98□□□□□ -0.17
CLPX-204ENST00000559152 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
CLPX-204ENST00000559152 RAPGEF4Q8WZA2 1011 aa13.98□□□□□ -0.17
CLPX-204ENST00000559152 AXIN2Q9Y2T1 843 aa13.98□□□□□ -0.17
CLPX-204ENST00000559152 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
CLPX-204ENST00000559152 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
CLPX-204ENST00000559152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.97□□□□□ -0.177e-7■■■□□ 15.9
CLPX-204ENST00000559152 ABCC6O95255 1503 aa13.97□□□□□ -0.17
CLPX-204ENST00000559152 KDM3BQ7LBC6 1761 aa13.97□□□□□ -0.17
CLPX-204ENST00000559152 HSCBQ8IWL3 235 aa13.96□□□□□ -0.17
CLPX-204ENST00000559152 DBF4Q9UBU7 674 aaPredicted RBP13.96□□□□□ -0.17
CLPX-204ENST00000559152 UBTFL1P0CB47 393 aaPredicted RBP13.96□□□□□ -0.17
CLPX-204ENST00000559152 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.17
CLPX-204ENST00000559152 ZC3H6P61129 1189 aaKnown RBP13.96□□□□□ -0.17
CLPX-204ENST00000559152 SNX21Q969T3 373 aa13.96□□□□□ -0.17
CLPX-204ENST00000559152 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.17
CLPX-204ENST00000559152 OSBPL3Q9H4L5 887 aa13.96□□□□□ -0.17
CLPX-204ENST00000559152 TNS3Q68CZ2 1445 aa13.96□□□□□ -0.18
CLPX-204ENST00000559152 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
CLPX-204ENST00000559152 GSPT1P15170 499 aaKnown RBP13.95□□□□□ -0.18
CLPX-204ENST00000559152 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
CLPX-204ENST00000559152 RGPD2P0DJD1 1756 aa13.95□□□□□ -0.18
CLPX-204ENST00000559152 N4BP2Q86UW6 1770 aaPredicted RBP13.95□□□□□ -0.18
CLPX-204ENST00000559152 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
CLPX-204ENST00000559152 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
CLPX-204ENST00000559152 LRRCC1Q9C099 1032 aa13.94□□□□□ -0.18
CLPX-204ENST00000559152 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
CLPX-204ENST00000559152 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
CLPX-204ENST00000559152 CHPF2Q9P2E5 772 aa13.94□□□□□ -0.18
CLPX-204ENST00000559152 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
CLPX-204ENST00000559152 DNAAF4Q8WXU2 420 aa13.94□□□□□ -0.18
CLPX-204ENST00000559152 NLRP2Q9NX02 1062 aa13.94□□□□□ -0.18
CLPX-204ENST00000559152 PXDNQ92626 1479 aa13.93□□□□□ -0.18
CLPX-204ENST00000559152 HEG1Q9ULI3 1381 aa13.93□□□□□ -0.18
CLPX-204ENST00000559152 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
CLPX-204ENST00000559152 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
CLPX-204ENST00000559152 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
CLPX-204ENST00000559152 LRRFIP2Q9Y608 721 aaKnown RBP13.92□□□□□ -0.18
CLPX-204ENST00000559152 CPDO75976 1380 aa13.92□□□□□ -0.18
CLPX-204ENST00000559152 APBB1O00213 710 aa13.92□□□□□ -0.18
CLPX-204ENST00000559152 KCNQ3O43525 872 aa13.92□□□□□ -0.18
CLPX-204ENST00000559152 SMARCA5O60264 1052 aaPredicted RBP13.92□□□□□ -0.18
CLPX-204ENST00000559152 RAB11FIP3O75154 756 aa13.92□□□□□ -0.18
CLPX-204ENST00000559152 CSB-PGBD3P0DP91 1061 aa13.92□□□□□ -0.18
CLPX-204ENST00000559152 SLKQ9H2G2 1235 aaPredicted RBP13.92□□□□□ -0.18
CLPX-204ENST00000559152 HYPKQ9NX55 129 aa13.92□□□□□ -0.18
CLPX-204ENST00000559152 IBTKQ9P2D0 1353 aaPredicted RBP13.92□□□□□ -0.18
CLPX-204ENST00000559152 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
CLPX-204ENST00000559152 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
CLPX-204ENST00000559152 HSP90AB1P08238 724 aaKnown RBP13.91□□□□□ -0.18
CLPX-204ENST00000559152 SDSP20132 328 aa13.91□□□□□ -0.18
CLPX-204ENST00000559152 PDE1AP54750 535 aa13.91□□□□□ -0.18
CLPX-204ENST00000559152 BEND3Q5T5X7 828 aa13.91□□□□□ -0.18
CLPX-204ENST00000559152 IFNL2Q8IZJ0 200 aa13.91□□□□□ -0.18
CLPX-204ENST00000559152 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
CLPX-204ENST00000559152 SSH3Q8TE77 659 aa13.91□□□□□ -0.18
CLPX-204ENST00000559152 ALDH1L1O75891 902 aa13.9□□□□□ -0.18
CLPX-204ENST00000559152 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
CLPX-204ENST00000559152 EXOC6BQ9Y2D4 811 aa13.9□□□□□ -0.18
CLPX-204ENST00000559152 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
CLPX-204ENST00000559152 PNMA6EA0A0J9YXQ4 647 aa13.9□□□□□ -0.18
CLPX-204ENST00000559152 REC8O95072 547 aa13.9□□□□□ -0.18
CLPX-204ENST00000559152 HSP90AB4PQ58FF6 505 aa13.9□□□□□ -0.18
CLPX-204ENST00000559152 OTUD7AQ8TE49 926 aaPredicted RBP13.9□□□□□ -0.18
CLPX-204ENST00000559152 SLC52A2Q9HAB3 445 aa13.9□□□□□ -0.18
CLPX-204ENST00000559152 CHMP5Q9NZZ3 219 aa13.9□□□□□ -0.18
CLPX-204ENST00000559152 PHKG2P15735 406 aa13.89□□□□□ -0.19
CLPX-204ENST00000559152 KSR2Q6VAB6 950 aa13.89□□□□□ -0.19
CLPX-204ENST00000559152 AOX1Q06278 1338 aa13.89□□□□□ -0.19
CLPX-204ENST00000559152 FRAT2O75474 233 aaPredicted RBP13.88□□□□□ -0.19
CLPX-204ENST00000559152 DDX17Q92841 729 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms