RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 IFNL2Q8IZJ0 200 aa10.01□□□□□ -0.81
LRRC28-211ENST00000558890 ADAMTS8Q9UP79 889 aa10.01□□□□□ -0.81
LRRC28-211ENST00000558890 MRC1P22897 1456 aa10.01□□□□□ -0.81
LRRC28-211ENST00000558890 TNS1Q9HBL0 1735 aaKnown RBP10.01□□□□□ -0.81
LRRC28-211ENST00000558890 MAPK8IP3Q9UPT6 1336 aa10.01□□□□□ -0.81
LRRC28-211ENST00000558890 BAG6P46379 1132 aa10□□□□□ -0.81
LRRC28-211ENST00000558890 LMOD3Q0VAK6 560 aa10□□□□□ -0.81
LRRC28-211ENST00000558890 PIGBQ92521 554 aa10□□□□□ -0.81
LRRC28-211ENST00000558890 SIPA1L3O60292 1781 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-211ENST00000558890 KAT6BQ8WYB5 2073 aa9.99□□□□□ -0.81
LRRC28-211ENST00000558890 HSP90AB1P08238 724 aaKnown RBP9.99□□□□□ -0.81
LRRC28-211ENST00000558890 PRKAR2BP31323 418 aa9.99□□□□□ -0.81
LRRC28-211ENST00000558890 LGR6Q9HBX8 967 aa9.99□□□□□ -0.81
LRRC28-211ENST00000558890 LRRC4BQ9NT99 713 aa9.99□□□□□ -0.81
LRRC28-211ENST00000558890 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-211ENST00000558890 ERVV-2B6SEH9 535 aa9.98□□□□□ -0.81
LRRC28-211ENST00000558890 RRP1P56182 461 aaKnown RBP9.98□□□□□ -0.81
LRRC28-211ENST00000558890 SF3B2Q13435 895 aaKnown RBP9.98□□□□□ -0.81
LRRC28-211ENST00000558890 B4GALNT3Q6L9W6 998 aa9.98□□□□□ -0.81
LRRC28-211ENST00000558890 ZNF530Q6P9A1 599 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-211ENST00000558890 DCAF5Q96JK2 942 aa9.98□□□□□ -0.81
LRRC28-211ENST00000558890 RCAN3Q9UKA8 241 aa9.98□□□□□ -0.81
LRRC28-211ENST00000558890 CEMIPQ8WUJ3 1361 aa9.98□□□□□ -0.81
LRRC28-211ENST00000558890 MAP3K5Q99683 1374 aa9.98□□□□□ -0.81
LRRC28-211ENST00000558890 CICQ96RK0 1608 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-211ENST00000558890 ZNF831Q5JPB2 1677 aa9.97□□□□□ -0.81
LRRC28-211ENST00000558890 NFE2L2Q16236 605 aa9.97□□□□□ -0.81
LRRC28-211ENST00000558890 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
LRRC28-211ENST00000558890 AKAP4Q5JQC9 854 aa9.97□□□□□ -0.81
LRRC28-211ENST00000558890 IL17REQ8NFR9 667 aa9.97□□□□□ -0.81
LRRC28-211ENST00000558890 CCDC136Q96JN2 1154 aa9.97□□□□□ -0.81
LRRC28-211ENST00000558890 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-211ENST00000558890 NHSQ6T4R5 1651 aa9.96□□□□□ -0.81
LRRC28-211ENST00000558890 RGPD3A6NKT7 1758 aaPredicted RBP9.96□□□□□ -0.81
LRRC28-211ENST00000558890 RGPD4Q7Z3J3 1758 aa9.96□□□□□ -0.81
LRRC28-211ENST00000558890 SENP3-EIF4A1A0A087X0R7 540 aa9.96□□□□□ -0.82
LRRC28-211ENST00000558890 RNMTO43148 476 aaKnown RBP9.96□□□□□ -0.82
LRRC28-211ENST00000558890 CALD1Q05682 793 aaKnown RBP9.96□□□□□ -0.82
LRRC28-211ENST00000558890 MPRIPQ6WCQ1 1025 aa9.96□□□□□ -0.82
LRRC28-211ENST00000558890 BABAM1Q9NWV8 329 aa9.96□□□□□ -0.82
LRRC28-211ENST00000558890 RBM19Q9Y4C8 960 aaKnown RBP9.96□□□□□ -0.82
LRRC28-211ENST00000558890 IL16Q14005 1332 aa9.96□□□□□ -0.82
LRRC28-211ENST00000558890 PAPPAQ13219 1627 aa9.96□□□□□ -0.82
LRRC28-211ENST00000558890 TOGARAM1Q9Y4F4 1720 aa9.96□□□□□ -0.82
LRRC28-211ENST00000558890 TMPOP42166 694 aaKnown RBP9.95□□□□□ -0.82
LRRC28-211ENST00000558890 C1orf141Q5JVX7 400 aa9.95□□□□□ -0.82
LRRC28-211ENST00000558890 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
LRRC28-211ENST00000558890 ANO8Q9HCE9 1232 aaPredicted RBP9.95□□□□□ -0.82
LRRC28-211ENST00000558890 ATG3Q9NT62 314 aa9.95□□□□□ -0.82
LRRC28-211ENST00000558890 ASAP1Q9ULH1 1129 aa9.95□□□□□ -0.82
LRRC28-211ENST00000558890 DOT1LQ8TEK3 1739 aa9.95□□□□□ -0.82
LRRC28-211ENST00000558890 ITGB4P16144 1822 aa9.94□□□□□ -0.82
LRRC28-211ENST00000558890 KDM3BQ7LBC6 1761 aa9.94□□□□□ -0.82
LRRC28-211ENST00000558890 ZNF521Q96K83 1311 aa9.94□□□□□ -0.82
LRRC28-211ENST00000558890 GNAT3A8MTJ3 354 aa9.94□□□□□ -0.82
LRRC28-211ENST00000558890 NFATC2IPQ8NCF5 419 aa9.94□□□□□ -0.82
LRRC28-211ENST00000558890 BTAF1O14981 1849 aa9.93□□□□□ -0.82
LRRC28-211ENST00000558890 UBR2Q8IWV8 1755 aa9.93□□□□□ -0.82
LRRC28-211ENST00000558890 KCNQ4P56696 695 aa9.93□□□□□ -0.82
LRRC28-211ENST00000558890 WDR63Q8IWG1 891 aa9.93□□□□□ -0.82
LRRC28-211ENST00000558890 AKT1S1Q96B36 256 aa9.93□□□□□ -0.82
LRRC28-211ENST00000558890 SYTL4Q96C24 671 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-211ENST00000558890 SLC52A2Q9HAB3 445 aa9.93□□□□□ -0.82
LRRC28-211ENST00000558890 APAF1O14727 1248 aa9.92□□□□□ -0.82
LRRC28-211ENST00000558890 SLC27A3Q5K4L6 730 aa9.92□□□□□ -0.82
LRRC28-211ENST00000558890 RTF1Q92541 710 aaKnown RBP9.92□□□□□ -0.82
LRRC28-211ENST00000558890 RREB1Q92766 1687 aa9.92□□□□□ -0.82
LRRC28-211ENST00000558890 SOS1Q07889 1333 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-211ENST00000558890 HMGB2P26583 209 aaKnown RBP9.91□□□□□ -0.82
LRRC28-211ENST00000558890 RIPK4P57078 832 aa9.91□□□□□ -0.82
LRRC28-211ENST00000558890 ZNF827Q17R98 1081 aa9.91□□□□□ -0.82
LRRC28-211ENST00000558890 SMARCC1Q92922 1105 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-211ENST00000558890 CDCA7LQ96GN5 454 aa9.91□□□□□ -0.82
LRRC28-211ENST00000558890 PDGFDQ9GZP0 370 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-211ENST00000558890 TMOD3Q9NYL9 352 aa9.91□□□□□ -0.82
LRRC28-211ENST00000558890 ATF5Q9Y2D1 282 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-211ENST00000558890 PALLDQ8WX93 1383 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 FANCIQ9NVI1 1328 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 SIK1P57059 783 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 CABP4P57796 275 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 GOLGA2Q08379 1002 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 ITPK1Q13572 414 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 R3HDM1Q15032 1099 aaKnown RBP9.9□□□□□ -0.82
LRRC28-211ENST00000558890 SLC15A2Q16348 729 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-211ENST00000558890 TRIM35Q9UPQ4 493 aa9.9□□□□□ -0.82
LRRC28-211ENST00000558890 NUP188Q5SRE5 1749 aa9.9□□□□□ -0.83
LRRC28-211ENST00000558890 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-211ENST00000558890 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
LRRC28-211ENST00000558890 DCTN1Q14203 1278 aa9.89□□□□□ -0.83
LRRC28-211ENST00000558890 MCM10Q7L590 875 aa9.89□□□□□ -0.83
LRRC28-211ENST00000558890 CCDC146Q8IYE0 955 aa9.89□□□□□ -0.83
LRRC28-211ENST00000558890 IFT57Q9NWB7 429 aa9.89□□□□□ -0.83
LRRC28-211ENST00000558890 LY75O60449 1722 aa9.89□□□□□ -0.83
LRRC28-211ENST00000558890 LAMB4A4D0S4 1761 aa9.88□□□□□ -0.83
LRRC28-211ENST00000558890 KCNQ3O43525 872 aa9.88□□□□□ -0.83
LRRC28-211ENST00000558890 GNAI1P63096 354 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms