RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 ADAMTS8Q9UP79 889 aa13.82□□□□□ -0.2
PSMA4-207ENST00000558635 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
PSMA4-207ENST00000558635 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
PSMA4-207ENST00000558635 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
PSMA4-207ENST00000558635 PHACTR3Q96KR7 559 aa13.81□□□□□ -0.2
PSMA4-207ENST00000558635 PHKG2P15735 406 aa13.8□□□□□ -0.2
PSMA4-207ENST00000558635 MTHFSDQ2M296 383 aaKnown RBP13.8□□□□□ -0.2
PSMA4-207ENST00000558635 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
PSMA4-207ENST00000558635 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
PSMA4-207ENST00000558635 PLEKHF1Q96S99 279 aa13.79□□□□□ -0.2
PSMA4-207ENST00000558635 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
PSMA4-207ENST00000558635 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
PSMA4-207ENST00000558635 CCER2I3L3R5 266 aa13.78□□□□□ -0.2
PSMA4-207ENST00000558635 C1orf141Q5JVX7 400 aa13.78□□□□□ -0.2
PSMA4-207ENST00000558635 CCDC146Q8IYE0 955 aa13.78□□□□□ -0.2
PSMA4-207ENST00000558635 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
PSMA4-207ENST00000558635 BCL9O00512 1426 aa13.77□□□□□ -0.21
PSMA4-207ENST00000558635 MAP3K13O43283 966 aa13.77□□□□□ -0.21
PSMA4-207ENST00000558635 NEFMP07197 916 aa13.77□□□□□ -0.21
PSMA4-207ENST00000558635 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.21
PSMA4-207ENST00000558635 GAS2L2Q8NHY3 880 aa13.77□□□□□ -0.21
PSMA4-207ENST00000558635 EP400Q96L91 3159 aa13.77□□□□□ -0.21
PSMA4-207ENST00000558635 SHANK3Q9BYB0 1731 aa13.77□□□□□ -0.21
PSMA4-207ENST00000558635 MAPK8IP3Q9UPT6 1336 aa13.76□□□□□ -0.21
PSMA4-207ENST00000558635 TRIM37O94972 964 aa13.76□□□□□ -0.21
PSMA4-207ENST00000558635 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
PSMA4-207ENST00000558635 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
PSMA4-207ENST00000558635 KCNQ2O43526 872 aa13.75□□□□□ -0.21
PSMA4-207ENST00000558635 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
PSMA4-207ENST00000558635 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
PSMA4-207ENST00000558635 PTF1AQ7RTS3 328 aa13.75□□□□□ -0.21
PSMA4-207ENST00000558635 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
PSMA4-207ENST00000558635 UPF1Q92900 1129 aaKnown RBP eCLIP13.75□□□□□ -0.21
PSMA4-207ENST00000558635 RUNDC1Q96C34 613 aa13.75□□□□□ -0.21
PSMA4-207ENST00000558635 GNAT3A8MTJ3 354 aa13.74□□□□□ -0.21
PSMA4-207ENST00000558635 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
PSMA4-207ENST00000558635 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
PSMA4-207ENST00000558635 DCAF5Q96JK2 942 aa13.74□□□□□ -0.21
PSMA4-207ENST00000558635 BCL11BQ9C0K0 894 aaPredicted RBP13.74□□□□□ -0.21
PSMA4-207ENST00000558635 LHX8Q68G74 356 aa13.73□□□□□ -0.21
PSMA4-207ENST00000558635 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
PSMA4-207ENST00000558635 LGR6Q9HBX8 967 aa13.73□□□□□ -0.21
PSMA4-207ENST00000558635 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
PSMA4-207ENST00000558635 MAP3K5Q99683 1374 aa13.72□□□□□ -0.21
PSMA4-207ENST00000558635 RNMTO43148 476 aaKnown RBP13.72□□□□□ -0.21
PSMA4-207ENST00000558635 CCDC125Q86Z20 511 aa13.72□□□□□ -0.21
PSMA4-207ENST00000558635 ERVV-2B6SEH9 535 aa13.71□□□□□ -0.21
PSMA4-207ENST00000558635 SOCS7O14512 581 aa13.71□□□□□ -0.21
PSMA4-207ENST00000558635 TMPOP42166 694 aaKnown RBP13.71□□□□□ -0.21
PSMA4-207ENST00000558635 SF3B2Q13435 895 aaKnown RBP13.71□□□□□ -0.21
PSMA4-207ENST00000558635 IL17REQ8NFR9 667 aa13.71□□□□□ -0.21
PSMA4-207ENST00000558635 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
PSMA4-207ENST00000558635 APAF1O14727 1248 aa13.7□□□□□ -0.22
PSMA4-207ENST00000558635 APBA3O96018 575 aa13.7□□□□□ -0.22
PSMA4-207ENST00000558635 RIPK4P57078 832 aa13.7□□□□□ -0.22
PSMA4-207ENST00000558635 CABP4P57796 275 aa13.7□□□□□ -0.22
PSMA4-207ENST00000558635 NEUROD2Q15784 382 aa13.7□□□□□ -0.22
PSMA4-207ENST00000558635 ASTLQ6HA08 431 aaPredicted RBP13.7□□□□□ -0.22
PSMA4-207ENST00000558635 IFNLR1Q8IU57 520 aaPredicted RBP13.7□□□□□ -0.22
PSMA4-207ENST00000558635 PIGBQ92521 554 aa13.7□□□□□ -0.22
PSMA4-207ENST00000558635 RTF1Q92541 710 aaKnown RBP13.7□□□□□ -0.22
PSMA4-207ENST00000558635 SGIP1Q9BQI5 828 aa13.7□□□□□ -0.22
PSMA4-207ENST00000558635 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
PSMA4-207ENST00000558635 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
PSMA4-207ENST00000558635 MCM10Q7L590 875 aa13.69□□□□□ -0.22
PSMA4-207ENST00000558635 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
PSMA4-207ENST00000558635 DOT1LQ8TEK3 1739 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 TOGARAM1Q9Y4F4 1720 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 SENP3-EIF4A1A0A087X0R7 540 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
PSMA4-207ENST00000558635 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 SLC52A2Q9HAB3 445 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 SBF2Q86WG5 1849 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 NHSQ6T4R5 1651 aa13.68□□□□□ -0.22
PSMA4-207ENST00000558635 BAG6P46379 1132 aa13.67□□□□□ -0.22
PSMA4-207ENST00000558635 TEFQ10587 303 aa13.67□□□□□ -0.22
PSMA4-207ENST00000558635 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
PSMA4-207ENST00000558635 CEMIPQ8WUJ3 1361 aa13.67□□□□□ -0.22
PSMA4-207ENST00000558635 KAT6BQ8WYB5 2073 aa13.67□□□□□ -0.22
PSMA4-207ENST00000558635 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
PSMA4-207ENST00000558635 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
PSMA4-207ENST00000558635 PLSCR1O15162 318 aa13.65□□□□□ -0.22
PSMA4-207ENST00000558635 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.22
PSMA4-207ENST00000558635 GSE1Q14687 1217 aa13.65□□□□□ -0.22
PSMA4-207ENST00000558635 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
PSMA4-207ENST00000558635 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.22
PSMA4-207ENST00000558635 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
PSMA4-207ENST00000558635 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
PSMA4-207ENST00000558635 SCN11AQ9UI33 1791 aa13.64□□□□□ -0.23
PSMA4-207ENST00000558635 ADAMTS7Q9UKP4 1686 aa13.64□□□□□ -0.23
PSMA4-207ENST00000558635 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
PSMA4-207ENST00000558635 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
PSMA4-207ENST00000558635 CAMKK2Q96RR4 588 aa13.64□□□□□ -0.23
PSMA4-207ENST00000558635 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
PSMA4-207ENST00000558635 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
PSMA4-207ENST00000558635 MRC1P22897 1456 aa13.63□□□□□ -0.23
PSMA4-207ENST00000558635 PYGBP11216 843 aa13.63□□□□□ -0.23
PSMA4-207ENST00000558635 SMARCC1Q92922 1105 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms