RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 RALBP1Q15311 655 aa20.92■□□□□ 0.94
LINC01220-201ENST00000558575 MEGF6O75095 1541 aa20.92■□□□□ 0.94
LINC01220-201ENST00000558575 BRCA1P38398 1863 aaKnown RBP20.91■□□□□ 0.94
LINC01220-201ENST00000558575 PRKRIP1Q9H875 184 aaPredicted RBP20.91■□□□□ 0.94
LINC01220-201ENST00000558575 NCAPD2Q15021 1401 aa20.9■□□□□ 0.94
LINC01220-201ENST00000558575 TOMM70O94826 608 aa20.89■□□□□ 0.93
LINC01220-201ENST00000558575 PCNTO95613 3336 aa20.89■□□□□ 0.93
LINC01220-201ENST00000558575 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
LINC01220-201ENST00000558575 PKD1L3Q7Z443 1732 aa20.88■□□□□ 0.93
LINC01220-201ENST00000558575 DIAPH1O60610 1272 aaKnown RBP20.88■□□□□ 0.93
LINC01220-201ENST00000558575 HTRA3P83110 453 aa20.88■□□□□ 0.93
LINC01220-201ENST00000558575 AMIGO3Q86WK7 504 aa20.88■□□□□ 0.93
LINC01220-201ENST00000558575 AEBP1Q8IUX7 1158 aa20.86■□□□□ 0.93
LINC01220-201ENST00000558575 JMYQ8N9B5 988 aa20.85■□□□□ 0.93
LINC01220-201ENST00000558575 NMRK2Q9NPI5 230 aa20.85■□□□□ 0.93
LINC01220-201ENST00000558575 PRELPP51888 382 aa20.84■□□□□ 0.93
LINC01220-201ENST00000558575 SMIM5Q71RC9 77 aa20.84■□□□□ 0.93
LINC01220-201ENST00000558575 FLAD1Q8NFF5 587 aa20.84■□□□□ 0.93
LINC01220-201ENST00000558575 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
LINC01220-201ENST00000558575 KLRG1Q96E93 195 aa20.84■□□□□ 0.93
LINC01220-201ENST00000558575 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.93
LINC01220-201ENST00000558575 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
LINC01220-201ENST00000558575 TNS4Q8IZW8 715 aa20.83■□□□□ 0.93
LINC01220-201ENST00000558575 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
LINC01220-201ENST00000558575 MYBBP1AQ9BQG0 1328 aaKnown RBP20.82■□□□□ 0.92
LINC01220-201ENST00000558575 TATP17735 454 aaPredicted RBP20.82■□□□□ 0.92
LINC01220-201ENST00000558575 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
LINC01220-201ENST00000558575 PXDNLA1KZ92 1463 aa20.81■□□□□ 0.92
LINC01220-201ENST00000558575 PALLDQ8WX93 1383 aa20.81■□□□□ 0.92
LINC01220-201ENST00000558575 HMOX1P09601 288 aa20.8■□□□□ 0.92
LINC01220-201ENST00000558575 KDRP35968 1356 aa20.8■□□□□ 0.92
LINC01220-201ENST00000558575 TNRC6CQ9HCJ0 1690 aaKnown RBP20.79■□□□□ 0.92
LINC01220-201ENST00000558575 SBF1O95248 1867 aa20.79■□□□□ 0.92
LINC01220-201ENST00000558575 U2SURPO15042 1029 aaKnown RBP20.78■□□□□ 0.92
LINC01220-201ENST00000558575 PHF14O94880 888 aa20.78■□□□□ 0.92
LINC01220-201ENST00000558575 RBM46Q8TBY0 533 aaKnown RBP20.78■□□□□ 0.92
LINC01220-201ENST00000558575 CYP27B1O15528 508 aa20.77■□□□□ 0.92
LINC01220-201ENST00000558575 CCDC184Q52MB2 194 aa20.76■□□□□ 0.91
LINC01220-201ENST00000558575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.91
LINC01220-201ENST00000558575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
LINC01220-201ENST00000558575 AK7Q96M32 723 aa20.75■□□□□ 0.91
LINC01220-201ENST00000558575 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
LINC01220-201ENST00000558575 ANP32CO43423 234 aa20.74■□□□□ 0.91
LINC01220-201ENST00000558575 U2AF1L5P0DN76 240 aaPredicted RBP20.73■□□□□ 0.91
LINC01220-201ENST00000558575 U2AF1Q01081 240 aaKnown RBP eCLIP20.73■□□□□ 0.91
LINC01220-201ENST00000558575 RSPH6AQ9H0K4 717 aa20.73■□□□□ 0.91
LINC01220-201ENST00000558575 SPG7Q9UQ90 795 aa20.73■□□□□ 0.91
LINC01220-201ENST00000558575 KCPQ6ZWJ8 1503 aa20.72■□□□□ 0.91
LINC01220-201ENST00000558575 C4AP0C0L4 1744 aa20.71■□□□□ 0.91
LINC01220-201ENST00000558575 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
LINC01220-201ENST00000558575 MPRIPQ6WCQ1 1025 aa20.71■□□□□ 0.91
LINC01220-201ENST00000558575 BCS1LQ9Y276 419 aa20.71■□□□□ 0.91
LINC01220-201ENST00000558575 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
LINC01220-201ENST00000558575 PHACTR3Q96KR7 559 aa20.7■□□□□ 0.9
LINC01220-201ENST00000558575 PCDH11XQ9BZA7 1347 aa20.7■□□□□ 0.9
LINC01220-201ENST00000558575 PCDH11YQ9BZA8 1340 aa20.7■□□□□ 0.9
LINC01220-201ENST00000558575 PLEKHG2Q9H7P9 1386 aa20.7■□□□□ 0.9
LINC01220-201ENST00000558575 FCHSD2O94868 740 aa20.69■□□□□ 0.9
LINC01220-201ENST00000558575 PHKG2P15735 406 aa20.69■□□□□ 0.9
LINC01220-201ENST00000558575 SSFA2P28290 1259 aa20.69■□□□□ 0.9
LINC01220-201ENST00000558575 FSTL1Q12841 308 aa20.69■□□□□ 0.9
LINC01220-201ENST00000558575 NKX1-1Q15270 411 aaPredicted RBP20.69■□□□□ 0.9
LINC01220-201ENST00000558575 AMOTQ4VCS5 1084 aa20.69■□□□□ 0.9
LINC01220-201ENST00000558575 ARHGAP27Q6ZUM4 889 aa20.69■□□□□ 0.9
LINC01220-201ENST00000558575 A0A0G2JLW4 131 aa20.68■□□□□ 0.9
LINC01220-201ENST00000558575 PRKAR2BP31323 418 aa20.68■□□□□ 0.9
LINC01220-201ENST00000558575 MTHFSDQ2M296 383 aaKnown RBP20.68■□□□□ 0.9
LINC01220-201ENST00000558575 LINC00116Q8NCU8 138 aa20.68■□□□□ 0.9
LINC01220-201ENST00000558575 MMP10P09238 476 aa20.67■□□□□ 0.9
LINC01220-201ENST00000558575 HMGB2P26583 209 aaKnown RBP20.67■□□□□ 0.9
LINC01220-201ENST00000558575 C16orf71Q8IYS4 520 aaPredicted RBP20.67■□□□□ 0.9
LINC01220-201ENST00000558575 IFNL2Q8IZJ0 200 aa20.67■□□□□ 0.9
LINC01220-201ENST00000558575 CCDC88AQ3V6T2 1871 aa20.67■□□□□ 0.9
LINC01220-201ENST00000558575 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
LINC01220-201ENST00000558575 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
LINC01220-201ENST00000558575 C9orf131Q5VYM1 1079 aa20.65■□□□□ 0.9
LINC01220-201ENST00000558575 PLEKHF1Q96S99 279 aa20.65■□□□□ 0.9
LINC01220-201ENST00000558575 HSPA1AP0DMV8 641 aaKnown RBP20.64■□□□□ 0.89
LINC01220-201ENST00000558575 HSPA1BP0DMV9 641 aaKnown RBP20.64■□□□□ 0.89
LINC01220-201ENST00000558575 TGFB2P61812 414 aa20.64■□□□□ 0.89
LINC01220-201ENST00000558575 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.89
LINC01220-201ENST00000558575 ADAMTS8Q9UP79 889 aa20.64■□□□□ 0.89
LINC01220-201ENST00000558575 PIGBQ92521 554 aa20.63■□□□□ 0.89
LINC01220-201ENST00000558575 GNPATO15228 680 aa20.62■□□□□ 0.89
LINC01220-201ENST00000558575 SLC34A2O95436 690 aa20.62■□□□□ 0.89
LINC01220-201ENST00000558575 DPEP1P16444 411 aa20.62■□□□□ 0.89
LINC01220-201ENST00000558575 ITPK1Q13572 414 aa20.62■□□□□ 0.89
LINC01220-201ENST00000558575 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
LINC01220-201ENST00000558575 LOC102724428A0A0B4J2F2 783 aa20.61■□□□□ 0.89
LINC01220-201ENST00000558575 SIK1P57059 783 aa20.61■□□□□ 0.89
LINC01220-201ENST00000558575 AKAP4Q5JQC9 854 aa20.61■□□□□ 0.89
LINC01220-201ENST00000558575 DIEXFQ68CQ4 756 aaKnown RBP20.61■□□□□ 0.89
LINC01220-201ENST00000558575 PNISRQ8TF01 805 aaKnown RBP20.61■□□□□ 0.89
LINC01220-201ENST00000558575 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
LINC01220-201ENST00000558575 LGR6Q9HBX8 967 aa20.6■□□□□ 0.89
LINC01220-201ENST00000558575 TIAM2Q8IVF5 1701 aa20.6■□□□□ 0.89
LINC01220-201ENST00000558575 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
LINC01220-201ENST00000558575 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
LINC01220-201ENST00000558575 KCNA3P22001 575 aa20.59■□□□□ 0.89
LINC01220-201ENST00000558575 C1orf141Q5JVX7 400 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms