RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 CDC14CA4D256 554 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 TMEM229AB2RXF0 380 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 GTF2E1P29083 439 aaPredicted RBP10.21□□□□□ -0.77
COPS2-204ENST00000558545 GTF2IP78347 998 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 KRT76Q01546 638 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 GNASQ5JWF2 1037 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 TBC1D9Q6ZT07 1266 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 ZSCAN1Q8NBB4 408 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 GLMNQ92990 594 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 TIMMDC1Q9NPL8 285 aa10.21□□□□□ -0.77
COPS2-204ENST00000558545 H7C1W4 665 aa10.2□□□□□ -0.78
COPS2-204ENST00000558545 TMEM214Q6NUQ4 689 aaKnown RBP10.2□□□□□ -0.78
COPS2-204ENST00000558545 RHBDD1Q8TEB9 315 aa10.2□□□□□ -0.78
COPS2-204ENST00000558545 COL25A1Q9BXS0 654 aaPredicted RBP10.2□□□□□ -0.78
COPS2-204ENST00000558545 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 F11P03951 625 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 SMTNP53814 917 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 MTFR1Q15390 333 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 C4orf17Q53FE4 359 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 USP17L2Q6R6M4 530 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 TRIM50Q86XT4 487 aa10.19□□□□□ -0.78
COPS2-204ENST00000558545 ZNF837Q96EG3 531 aaPredicted RBP10.19□□□□□ -0.78
COPS2-204ENST00000558545 DEPDC4Q8N2C3 294 aa10.18□□□□□ -0.78
COPS2-204ENST00000558545 DBN1Q16643 649 aa10.17□□□□□ -0.78
COPS2-204ENST00000558545 RNFT1Q5M7Z0 435 aa10.17□□□□□ -0.78
COPS2-204ENST00000558545 GAS2L1Q99501 681 aaPredicted RBP10.17□□□□□ -0.78
COPS2-204ENST00000558545 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
COPS2-204ENST00000558545 ZNF295-AS1Q8N0V1 137 aa10.16□□□□□ -0.78
COPS2-204ENST00000558545 CNTNAP3BQ96NU0 1288 aa10.16□□□□□ -0.78
COPS2-204ENST00000558545 CNTNAP3Q9BZ76 1288 aa10.16□□□□□ -0.78
COPS2-204ENST00000558545 FAM181BA6NEQ2 426 aa10.15□□□□□ -0.78
COPS2-204ENST00000558545 A6NJY4 79 aa10.15□□□□□ -0.78
COPS2-204ENST00000558545 CDK2AP1O14519 115 aa10.15□□□□□ -0.78
COPS2-204ENST00000558545 BACH1O14867 736 aa10.15□□□□□ -0.78
COPS2-204ENST00000558545 PHKA2P46019 1235 aa10.15□□□□□ -0.78
COPS2-204ENST00000558545 ATP1A2P50993 1020 aa10.15□□□□□ -0.78
COPS2-204ENST00000558545 LBRQ14739 615 aaKnown RBP10.15□□□□□ -0.78
COPS2-204ENST00000558545 IQSEC3Q9UPP2 1182 aaPredicted RBP10.15□□□□□ -0.78
COPS2-204ENST00000558545 SLURP2P0DP57 97 aa10.14□□□□□ -0.79
COPS2-204ENST00000558545 FOXR1Q6PIV2 292 aa10.14□□□□□ -0.79
COPS2-204ENST00000558545 CALR3Q96L12 384 aaKnown RBP10.14□□□□□ -0.79
COPS2-204ENST00000558545 NIFKQ9BYG3 293 aaKnown RBP10.14□□□□□ -0.79
COPS2-204ENST00000558545 SERTAD1Q9UHV2 236 aa10.14□□□□□ -0.79
COPS2-204ENST00000558545 ZBTB7BO15156 539 aaPredicted RBP10.13□□□□□ -0.79
COPS2-204ENST00000558545 GAS6Q14393 721 aa10.13□□□□□ -0.79
COPS2-204ENST00000558545 ZNF358Q9NW07 568 aa10.13□□□□□ -0.79
COPS2-204ENST00000558545 TFIP11Q9UBB9 837 aaKnown RBP10.13□□□□□ -0.79
COPS2-204ENST00000558545 MAFBQ9Y5Q3 323 aaPredicted RBP10.13□□□□□ -0.79
COPS2-204ENST00000558545 THBS1P07996 1170 aa10.12□□□□□ -0.79
COPS2-204ENST00000558545 CLDN10P78369 228 aa10.12□□□□□ -0.79
COPS2-204ENST00000558545 PSME1Q06323 249 aa10.12□□□□□ -0.79
COPS2-204ENST00000558545 LARGE2Q8N3Y3 721 aa10.12□□□□□ -0.79
COPS2-204ENST00000558545 C1orf216Q8TAB5 229 aa10.12□□□□□ -0.79
COPS2-204ENST00000558545 NUCKS1Q9H1E3 243 aaKnown RBP10.12□□□□□ -0.79
COPS2-204ENST00000558545 MKRN1Q9UHC7 482 aaKnown RBP10.12□□□□□ -0.79
COPS2-204ENST00000558545 PALM3A6NDB9 673 aaPredicted RBP10.11□□□□□ -0.79
COPS2-204ENST00000558545 MSX1P28360 303 aa10.11□□□□□ -0.79
COPS2-204ENST00000558545 EPHA4P54764 986 aa10.11□□□□□ -0.79
COPS2-204ENST00000558545 SIX5Q8N196 739 aa10.11□□□□□ -0.79
COPS2-204ENST00000558545 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
COPS2-204ENST00000558545 GTPBP3Q969Y2 492 aaKnown RBP10.11□□□□□ -0.79
COPS2-204ENST00000558545 PPP1R12CQ9BZL4 782 aa10.11□□□□□ -0.79
COPS2-204ENST00000558545 DNAAF2Q9NVR5 837 aaKnown RBP10.11□□□□□ -0.79
COPS2-204ENST00000558545 KIAA1024Q9UPX6 916 aa10.11□□□□□ -0.79
COPS2-204ENST00000558545 M0R2N6 131 aa10.1□□□□□ -0.79
COPS2-204ENST00000558545 PLA2G4AP47712 749 aa10.1□□□□□ -0.79
COPS2-204ENST00000558545 FOXK2Q01167 660 aa10.1□□□□□ -0.79
COPS2-204ENST00000558545 SRSF11Q05519 484 aaKnown RBP10.1□□□□□ -0.79
COPS2-204ENST00000558545 CCDC102BQ68D86 513 aa10.1□□□□□ -0.79
COPS2-204ENST00000558545 OGFOD1Q8N543 542 aa10.1□□□□□ -0.79
COPS2-204ENST00000558545 TRERF1Q96PN7 1200 aa10.1□□□□□ -0.79
COPS2-204ENST00000558545 CRISPLD1Q9H336 500 aa10.1□□□□□ -0.79
COPS2-204ENST00000558545 GPAMQ9HCL2 828 aa10.1□□□□□ -0.79
COPS2-204ENST00000558545 SCHIP1Q9P0W5 487 aaPredicted RBP10.1□□□□□ -0.79
COPS2-204ENST00000558545 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
COPS2-204ENST00000558545 USP3Q9Y6I4 520 aa10.09□□□□□ -0.79
COPS2-204ENST00000558545 DKK1O94907 266 aa10.08□□□□□ -0.8
COPS2-204ENST00000558545 CSB-PGBD3P0DP91 1061 aa10.08□□□□□ -0.8
COPS2-204ENST00000558545 UBAP2LQ14157 1087 aaKnown RBP10.08□□□□□ -0.8
COPS2-204ENST00000558545 PGBD3Q8N328 593 aa10.08□□□□□ -0.8
COPS2-204ENST00000558545 TPCN2Q8NHX9 752 aa10.08□□□□□ -0.8
COPS2-204ENST00000558545 CFHR5Q9BXR6 569 aa10.08□□□□□ -0.8
COPS2-204ENST00000558545 GPR25O00155 361 aa10.07□□□□□ -0.8
COPS2-204ENST00000558545 ATP4AP20648 1035 aa10.07□□□□□ -0.8
COPS2-204ENST00000558545 ZDHHC3Q9NYG2 299 aa10.07□□□□□ -0.8
COPS2-204ENST00000558545 ADAMTS2O95450 1211 aa10.06□□□□□ -0.8
COPS2-204ENST00000558545 EFHC2Q5JST6 749 aa10.06□□□□□ -0.8
COPS2-204ENST00000558545 RUBCNLQ9H714 662 aa10.06□□□□□ -0.8
COPS2-204ENST00000558545 TEAD4Q15561 434 aa10.05□□□□□ -0.8
COPS2-204ENST00000558545 NBPF1Q3BBV0 1214 aa10.05□□□□□ -0.8
COPS2-204ENST00000558545 KANK4Q5T7N3 995 aaPredicted RBP10.05□□□□□ -0.8
COPS2-204ENST00000558545 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
COPS2-204ENST00000558545 CABP1Q9NZU7 370 aa10.05□□□□□ -0.8
COPS2-204ENST00000558545 ZNF777Q9ULD5 760 aaPredicted RBP10.05□□□□□ -0.8
COPS2-204ENST00000558545 NLRP8Q86W28 1048 aa10.04□□□□□ -0.8
COPS2-204ENST00000558545 SLC9A9Q8IVB4 645 aa10.04□□□□□ -0.8
COPS2-204ENST00000558545 NDFIP2Q9NV92 336 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms