RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 NBPF15Q8N660 670 aa5.73□□□□□ -1.49
HERC1-203ENST00000558532 CCDC155Q8N6L0 562 aa5.73□□□□□ -1.49
HERC1-203ENST00000558532 ERBB4Q15303 1308 aa5.73□□□□□ -1.49
HERC1-203ENST00000558532 ARID3CA6NKF2 412 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 VSIG8P0DPA2 414 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 LMOD1P29536 600 aaPredicted RBP5.72□□□□□ -1.49
HERC1-203ENST00000558532 MTFR1Q15390 333 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 KANK4Q5T7N3 995 aaPredicted RBP5.72□□□□□ -1.49
HERC1-203ENST00000558532 TRIM50Q86XT4 487 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 ZNF295-AS1Q8N0V1 137 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 OGFOD1Q8N543 542 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 SLC4A9Q96Q91 983 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 ZSCAN10Q96SZ4 725 aaPredicted RBP5.72□□□□□ -1.49
HERC1-203ENST00000558532 ZNF358Q9NW07 568 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 SERTAD1Q9UHV2 236 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 USP3Q9Y6I4 520 aa5.72□□□□□ -1.49
HERC1-203ENST00000558532 ITGA6P23229 1130 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 ATP1A2P50993 1020 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 SMTNP53814 917 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 EPHA4P54764 986 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 PSME1Q06323 249 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 TAS1R3Q7RTX0 852 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 PPARGC1BQ86YN6 1023 aaKnown RBP5.71□□□□□ -1.5
HERC1-203ENST00000558532 SIX5Q8N196 739 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.71□□□□□ -1.5
HERC1-203ENST00000558532 TPCN2Q8NHX9 752 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 C1orf115Q9H7X2 142 aa5.71□□□□□ -1.5
HERC1-203ENST00000558532 DNAAF2Q9NVR5 837 aaKnown RBP5.71□□□□□ -1.5
HERC1-203ENST00000558532 CUEDC1Q9NWM3 386 aaPredicted RBP5.71□□□□□ -1.5
HERC1-203ENST00000558532 IQSEC3Q9UPP2 1182 aaPredicted RBP5.71□□□□□ -1.5
HERC1-203ENST00000558532 CRTC2Q53ET0 693 aaPredicted RBP5.7□□□□□ -1.5
HERC1-203ENST00000558532 C4orf17Q53FE4 359 aa5.7□□□□□ -1.5
HERC1-203ENST00000558532 WDR44Q5JSH3 913 aa5.7□□□□□ -1.5
HERC1-203ENST00000558532 CCDC102BQ68D86 513 aa5.7□□□□□ -1.5
HERC1-203ENST00000558532 LARGE2Q8N3Y3 721 aa5.7□□□□□ -1.5
HERC1-203ENST00000558532 RHBDD1Q8TEB9 315 aa5.7□□□□□ -1.5
HERC1-203ENST00000558532 SLC16A10Q8TF71 515 aa5.7□□□□□ -1.5
HERC1-203ENST00000558532 ZNF594Q96JF6 807 aaPredicted RBP5.7□□□□□ -1.5
HERC1-203ENST00000558532 A6NJY4 79 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L15C9J2P7 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L10C9JJH3 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L13C9JLJ4 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L12C9JPN9 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L11C9JVI0 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L21D6R901 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L18D6R9N7 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L22D6RA61 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L17D6RBQ6 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L19D6RCP7 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L20D6RJB6 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 PHKA2P46019 1235 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 FOXK2Q01167 660 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 USP17L24Q0WX57 530 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 PTK7Q13308 1070 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 TMEM214Q6NUQ4 689 aaKnown RBP5.69□□□□□ -1.5
HERC1-203ENST00000558532 NANOS1Q8WY41 292 aaKnown RBP5.69□□□□□ -1.5
HERC1-203ENST00000558532 IRF7Q92985 503 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 DYRK1BQ9Y463 629 aa5.69□□□□□ -1.5
HERC1-203ENST00000558532 FAM196BA6NMK8 535 aa5.68□□□□□ -1.5
HERC1-203ENST00000558532 BACH1O14867 736 aa5.68□□□□□ -1.5
HERC1-203ENST00000558532 RASA1P20936 1047 aa5.68□□□□□ -1.5
HERC1-203ENST00000558532 GMPRP36959 345 aa5.68□□□□□ -1.5
HERC1-203ENST00000558532 SRPK2P78362 688 aaKnown RBP5.68□□□□□ -1.5
HERC1-203ENST00000558532 GNASQ5JWF2 1037 aa5.68□□□□□ -1.5
HERC1-203ENST00000558532 GPR161Q8N6U8 529 aaKnown RBP5.68□□□□□ -1.5
HERC1-203ENST00000558532 TIMMDC1Q9NPL8 285 aa5.68□□□□□ -1.5
HERC1-203ENST00000558532 SCHIP1Q9P0W5 487 aaPredicted RBP5.68□□□□□ -1.5
HERC1-203ENST00000558532 TIMELESSQ9UNS1 1208 aa5.68□□□□□ -1.5
HERC1-203ENST00000558532 SFI1A8K8P3 1242 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 M0R2N6 131 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 CDK2AP1O14519 115 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 WIPF1O43516 503 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 THBS1P07996 1170 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 RFX1P22670 979 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 TNS4Q8IZW8 715 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 TSEN2Q8NCE0 465 aaKnown RBP5.67□□□□□ -1.5
HERC1-203ENST00000558532 ZNF837Q96EG3 531 aaPredicted RBP5.67□□□□□ -1.5
HERC1-203ENST00000558532 ARXQ96QS3 562 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 VRTNQ9H8Y1 702 aa5.67□□□□□ -1.5
HERC1-203ENST00000558532 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.66□□□□□ -1.5
HERC1-203ENST00000558532 A0A1B0GTH6 734 aa5.66□□□□□ -1.5
HERC1-203ENST00000558532 ATP4AP20648 1035 aa5.66□□□□□ -1.5
HERC1-203ENST00000558532 GTF2E1P29083 439 aaPredicted RBP5.66□□□□□ -1.5
HERC1-203ENST00000558532 PLA2G4AP47712 749 aa5.66□□□□□ -1.5
HERC1-203ENST00000558532 CCDC82Q8N4S0 544 aa5.66□□□□□ -1.5
HERC1-203ENST00000558532 ZDHHC1Q8WTX9 485 aa5.66□□□□□ -1.5
HERC1-203ENST00000558532 GAS2L1Q99501 681 aaPredicted RBP5.66□□□□□ -1.5
HERC1-203ENST00000558532 CDC14CA4D256 554 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 F11P03951 625 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 KRT76Q01546 638 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 DPYDQ12882 1025 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 DBN1Q16643 649 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 CDCA8Q53HL2 280 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 TBCELQ5QJ74 424 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 LARP1Q6PKG0 1096 aaKnown RBP5.65□□□□□ -1.5
HERC1-203ENST00000558532 ANKMY2Q8IV38 441 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 SLC9A9Q8IVB4 645 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 TRIM22Q8IYM9 498 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 VWA5B2Q8N398 1253 aa5.65□□□□□ -1.5
HERC1-203ENST00000558532 CCDC97Q96F63 343 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms